4jpt - Revision history

OCA at 12:05, 1 March 2024

OCA — Fri, 01 Mar 2024 12:05:45 GMT

←Older revision		Revision as of 12:05, 1 March 2024
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4jpt]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_RM11-1a Saccharomyces cerevisiae RM11-1a]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JPT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4JPT FirstGlance]. <br>		<table><tr><td colspan='2'>[[4jpt]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_RM11-1a Saccharomyces cerevisiae RM11-1a]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JPT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4JPT FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=Q24:QUINAZOLINE-2,4-DIAMINE'>Q24</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.41Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=Q24:QUINAZOLINE-2,4-DIAMINE'>Q24</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4jpt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jpt OCA], [https://pdbe.org/4jpt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4jpt RCSB], [https://www.ebi.ac.uk/pdbsum/4jpt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4jpt ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4jpt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jpt OCA], [https://pdbe.org/4jpt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4jpt RCSB], [https://www.ebi.ac.uk/pdbsum/4jpt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4jpt ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[https://www.uniprot.org/uniprot/B3LRE1_YEAS1 B3LRE1_YEAS1]		[https://www.uniprot.org/uniprot/B3LRE1_YEAS1 B3LRE1_YEAS1]
-	<div style="background-color:#fffaf0;">
-	== Publication Abstract from PubMed ==
-	Predicting absolute protein-ligand binding affinities remains a frontier challenge in ligand discovery and design. This becomes more difficult when ionic interactions are involved because of the large opposing solvation and electrostatic attraction energies. In a blind test, we examined whether alchemical free-energy calculations could predict binding affinities of 14 charged and 5 neutral compounds previously untested as ligands for a cavity binding site in cytochrome c peroxidase. In this simplified site, polar and cationic ligands compete with solvent to interact with a buried aspartate. Predictions were tested by calorimetry, spectroscopy, and crystallography. Of the 15 compounds predicted to bind, 13 were experimentally confirmed, while 4 compounds were false negative predictions. Predictions had a root-mean-square error of 1.95kcal/mol to the experimental affinities, and predicted poses had an average RMSD of 1.7A to the crystallographic poses. This test serves as a benchmark for these thermodynamically rigorous calculations at predicting binding affinities for charged compounds and gives insights into the existing sources of error, which are primarily electrostatic interactions inside proteins. Our experiments also provide a useful set of ionic binding affinities in a simplified system for testing new affinity prediction methods.
-
-	Blind Prediction of Charged Ligand Binding Affinities in a Model Binding Site.,Rocklin GJ, Boyce SE, Fischer M, Fish I, Mobley DL, Shoichet BK, Dill KA J Mol Biol. 2013 Jul 26. pii: S0022-2836(13)00477-4. doi:, 10.1016/j.jmb.2013.07.030. PMID:23896298<ref>PMID:23896298</ref>
-
-	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	</div>
-	<div class="pdbe-citations 4jpt" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
	*[[Cytochrome c peroxidase 3D structures\|Cytochrome c peroxidase 3D structures]]		*[[Cytochrome c peroxidase 3D structures\|Cytochrome c peroxidase 3D structures]]
-	== References ==
-	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 11:29, 24 November 2022

OCA — Thu, 24 Nov 2022 11:29:45 GMT

←Older revision		Revision as of 11:29, 24 November 2022
Line 1:		Line 1:

	==Crystal structure of Cytochrome C Peroxidase W191G-Gateless in complex with quinazoline-2,4-diamine==		==Crystal structure of Cytochrome C Peroxidase W191G-Gateless in complex with quinazoline-2,4-diamine==
-	<StructureSection load='4jpt' size='340' side='right' caption='[[4jpt]], [[Resolution\|resolution]] 1.41Å' scene=''>	+	<StructureSection load='4jpt' size='340' side='right'caption='[[4jpt]], [[Resolution\|resolution]] 1.41Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4jpt]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Baker's_yeast Baker's yeast~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JPT OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4JPT FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4jpt]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_RM11-1a Saccharomyces cerevisiae RM11-1a]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JPT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4JPT FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=Q24:QUINAZOLINE-2,4-DIAMINE'>Q24</scene~~></td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=Q24:QUINAZOLINE-2,4-DIAMINE'>Q24</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1kxn\|1kxn]], [[1kxm\|1kxm]], [[4jm5\|4jm5]], [[4jm6\|4jm6]], [[4jm8\|4jm8]], [[4jm9\|4jm9]], [[4jma\|4jma]], [[4jmw\|4jmw]], [[4jpl\|4jpl]], [[4jpu\|4jpu]], [[4jqj\|4jqj]], [[4jqk\|4jqk]], [[4jqm\|4jqm]], [[4jqn\|4jqn]]</td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4jpt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jpt OCA], [https://pdbe.org/4jpt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4jpt RCSB], [https://www.ebi.ac.uk/pdbsum/4jpt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4jpt ProSAT]</span></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">CCP1 CCP CPO YKR066C, SCRG_04081 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=285006 Baker's yeast])</td></tr>	+
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cytochrome-c_peroxidase Cytochrome-c peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.5 1.11.1.5] </span></td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4jpt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jpt OCA], [~~http~~://pdbe.org/4jpt PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4jpt RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4jpt PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4jpt ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/B3LRE1_YEAS1 B3LRE1_YEAS1]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 21:		Line 20:

	==See Also==		==See Also==
-	*[[Cytochrome c peroxidase\|Cytochrome c peroxidase]]	+	*[[Cytochrome c peroxidase 3D structures\|Cytochrome c peroxidase 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Baker's yeast~~]]	+	[[Category: Large Structures]]
-	[[Category: ~~Cytochrome~~-~~c peroxidase~~]]	+	[[Category: Saccharomyces cerevisiae RM11-1a]]
-	[[Category: Boyce~~, S E~~]]	+	[[Category: Boyce SE]]
-	[[Category: Fischer, M]]	+	[[Category: Fischer M]]
-	[[Category: Fish, I]]	+	[[Category: Fish I]]
-	~~[[Category: Free energy calculation]]~~	+
-	~~[[Category: Ligand binding]]~~	+
-	~~[[Category: Model system]]~~	+
-	~~[[Category: Molecular dynamic]]~~	+
-	~~[[Category: Oxidoreductase~~]]	+

OCA at 13:30, 11 August 2016

OCA — Thu, 11 Aug 2016 13:30:34 GMT

←Older revision		Revision as of 13:30, 11 August 2016
Line 1:		Line 1:
		+
	==Crystal structure of Cytochrome C Peroxidase W191G-Gateless in complex with quinazoline-2,4-diamine==		==Crystal structure of Cytochrome C Peroxidase W191G-Gateless in complex with quinazoline-2,4-diamine==
	<StructureSection load='4jpt' size='340' side='right' caption='[[4jpt]], [[Resolution\|resolution]] 1.41Å' scene=''>		<StructureSection load='4jpt' size='340' side='right' caption='[[4jpt]], [[Resolution\|resolution]] 1.41Å' scene=''>
Line 7:		Line 8:
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">CCP1 CCP CPO YKR066C, SCRG_04081 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=285006 Baker's yeast])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">CCP1 CCP CPO YKR066C, SCRG_04081 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=285006 Baker's yeast])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cytochrome-c_peroxidase Cytochrome-c peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.5 1.11.1.5] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cytochrome-c_peroxidase Cytochrome-c peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.5 1.11.1.5] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4jpt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jpt OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4jpt RCSB], [http://www.ebi.ac.uk/pdbsum/4jpt PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4jpt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jpt OCA], [http://pdbe.org/4jpt PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4jpt RCSB], [http://www.ebi.ac.uk/pdbsum/4jpt PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4jpt ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 17:		Line 18:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 4jpt" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==

OCA at 13:49, 4 January 2015

OCA — Sun, 04 Jan 2015 13:49:08 GMT

←Older revision		Revision as of 13:49, 4 January 2015
Line 1:		Line 1:
-	~~{{STRUCTURE_4jpt\| PDB=4jpt \| SCENE= }}~~	+	==Crystal structure of Cytochrome C Peroxidase W191G-Gateless in complex with quinazoline-2,4-diamine==
-	===Crystal structure of Cytochrome C Peroxidase W191G-Gateless in complex with quinazoline-2,4-diamine===	+	<StructureSection load='4jpt' size='340' side='right' caption='[[4jpt]], [[Resolution\|resolution]] 1.41Å' scene=''>
-	~~{{ABSTRACT_PUBMED_23896298}}~~	+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[4jpt]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Baker's_yeast Baker's yeast]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JPT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4JPT FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=Q24:QUINAZOLINE-2,4-DIAMINE'>Q24</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1kxn\|1kxn]], [[1kxm\|1kxm]], [[4jm5\|4jm5]], [[4jm6\|4jm6]], [[4jm8\|4jm8]], [[4jm9\|4jm9]], [[4jma\|4jma]], [[4jmw\|4jmw]], [[4jpl\|4jpl]], [[4jpu\|4jpu]], [[4jqj\|4jqj]], [[4jqk\|4jqk]], [[4jqm\|4jqm]], [[4jqn\|4jqn]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">CCP1 CCP CPO YKR066C, SCRG_04081 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=285006 Baker's yeast])</td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cytochrome-c_peroxidase Cytochrome-c peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.5 1.11.1.5] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4jpt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jpt OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4jpt RCSB], [http://www.ebi.ac.uk/pdbsum/4jpt PDBsum]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Predicting absolute protein-ligand binding affinities remains a frontier challenge in ligand discovery and design. This becomes more difficult when ionic interactions are involved because of the large opposing solvation and electrostatic attraction energies. In a blind test, we examined whether alchemical free-energy calculations could predict binding affinities of 14 charged and 5 neutral compounds previously untested as ligands for a cavity binding site in cytochrome c peroxidase. In this simplified site, polar and cationic ligands compete with solvent to interact with a buried aspartate. Predictions were tested by calorimetry, spectroscopy, and crystallography. Of the 15 compounds predicted to bind, 13 were experimentally confirmed, while 4 compounds were false negative predictions. Predictions had a root-mean-square error of 1.95kcal/mol to the experimental affinities, and predicted poses had an average RMSD of 1.7A to the crystallographic poses. This test serves as a benchmark for these thermodynamically rigorous calculations at predicting binding affinities for charged compounds and gives insights into the existing sources of error, which are primarily electrostatic interactions inside proteins. Our experiments also provide a useful set of ionic binding affinities in a simplified system for testing new affinity prediction methods.

-	~~==About this Structure==~~	+	Blind Prediction of Charged Ligand Binding Affinities in a Model Binding Site.,Rocklin GJ, Boyce SE, Fischer M, Fish I, Mobley DL, Shoichet BK, Dill KA J Mol Biol. 2013 Jul 26. pii: S0022-2836(13)00477-4. doi:, 10.1016/j.jmb.2013.07.030. PMID:23896298<ref>PMID:23896298</ref>
-	~~[[4jpt]] is~~ a ~~1 chain structure with sequence from [http~~:~~//en~~.~~wikipedia~~.~~org~~/~~wiki/Baker's_yeast Baker's yeast]~~. ~~Full crystallographic information is available from [http~~://~~oca~~.~~weizmann~~.ac.il/~~oca-bin/ocashort?id=4JPT OCA].~~	+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>

	==See Also==		==See Also==
	*[[Cytochrome c peroxidase\|Cytochrome c peroxidase]]		*[[Cytochrome c peroxidase\|Cytochrome c peroxidase]]
-		+	== References ==
-	==~~Reference~~==	+	<references/>
-	~~<ref group="xtra">PMID:023896298</ref>~~<references ~~group="xtra"~~/><~~references~~/>	+	__TOC__
		+	</StructureSection>
	[[Category: Baker's yeast]]		[[Category: Baker's yeast]]
	[[Category: Cytochrome-c peroxidase]]		[[Category: Cytochrome-c peroxidase]]
-	[[Category: Boyce, S E.]]	+	[[Category: Boyce, S E]]
-	[[Category: Fischer, M.]]	+	[[Category: Fischer, M]]
-	[[Category: Fish, I.]]	+	[[Category: Fish, I]]
	[[Category: Free energy calculation]]		[[Category: Free energy calculation]]
	[[Category: Ligand binding]]		[[Category: Ligand binding]]

OCA at 12:05, 20 November 2013

OCA — Wed, 20 Nov 2013 12:05:48 GMT

←Older revision		Revision as of 12:05, 20 November 2013
Line 4:		Line 4:

	==About this Structure==		==About this Structure==
-	[[4jpt]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Saccharomyces_cerevisiae_rm11-1a Saccharomyces cerevisiae rm11-1a~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JPT OCA].	+	[[4jpt]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Baker's_yeast Baker's yeast]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JPT OCA].

	==See Also==		==See Also==
Line 11:		Line 11:
	==Reference==		==Reference==
	<ref group="xtra">PMID:023896298</ref><references group="xtra"/><references/>		<ref group="xtra">PMID:023896298</ref><references group="xtra"/><references/>
		+	[[Category: Baker's yeast]]
	[[Category: Cytochrome-c peroxidase]]		[[Category: Cytochrome-c peroxidase]]
-	[[Category: Saccharomyces cerevisiae rm11-1a]]
	[[Category: Boyce, S E.]]		[[Category: Boyce, S E.]]
	[[Category: Fischer, M.]]		[[Category: Fischer, M.]]

OCA at 04:55, 10 October 2013

OCA — Thu, 10 Oct 2013 04:55:45 GMT

←Older revision		Revision as of 04:55, 10 October 2013
Line 1:		Line 1:
	{{STRUCTURE_4jpt\| PDB=4jpt \| SCENE= }}		{{STRUCTURE_4jpt\| PDB=4jpt \| SCENE= }}
	===Crystal structure of Cytochrome C Peroxidase W191G-Gateless in complex with quinazoline-2,4-diamine===		===Crystal structure of Cytochrome C Peroxidase W191G-Gateless in complex with quinazoline-2,4-diamine===
		+	{{ABSTRACT_PUBMED_23896298}}

	==About this Structure==		==About this Structure==
	[[4jpt]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_rm11-1a Saccharomyces cerevisiae rm11-1a]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JPT OCA].		[[4jpt]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_rm11-1a Saccharomyces cerevisiae rm11-1a]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JPT OCA].
		+
		+	==See Also==
		+	*[[Cytochrome c peroxidase\|Cytochrome c peroxidase]]
		+
		+	==Reference==
		+	<ref group="xtra">PMID:023896298</ref><references group="xtra"/><references/>
	[[Category: Cytochrome-c peroxidase]]		[[Category: Cytochrome-c peroxidase]]
	[[Category: Saccharomyces cerevisiae rm11-1a]]		[[Category: Saccharomyces cerevisiae rm11-1a]]

OCA at 05:21, 1 August 2013

OCA — Thu, 01 Aug 2013 05:21:09 GMT

←Older revision		Revision as of 05:21, 1 August 2013
Line 1:		Line 1:
-	~~'''Unreleased~~ structure~~'''~~	+	{{STRUCTURE_4jpt\| PDB=4jpt \| SCENE= }}
		+	===Crystal structure of Cytochrome C Peroxidase W191G-Gateless in complex with quinazoline-2,4-diamine===

-	~~The entry~~ 4jpt is ~~ON HOLD until Paper Publication~~	+	==About this Structure==
-		+	[[4jpt]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_rm11-1a Saccharomyces cerevisiae rm11-1a]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JPT OCA].
-	~~Authors~~: Boyce, S.E., Fischer, M., Fish, I.	+	[[Category: Cytochrome-c peroxidase]]
-		+	[[Category: Saccharomyces cerevisiae rm11-1a]]
-	~~Description~~: ~~Crystal structure of Cytochrome C Peroxidase W191G-Gateless in complex with quinazoline-2,4-diamine~~	+	[[Category: Boyce, S E.]]
		+	[[Category: Fischer, M.]]
		+	[[Category: Fish, I.]]
		+	[[Category: Free energy calculation]]
		+	[[Category: Ligand binding]]
		+	[[Category: Model system]]
		+	[[Category: Molecular dynamic]]
		+	[[Category: Oxidoreductase]]

OCA at 19:57, 17 April 2013

OCA — Wed, 17 Apr 2013 19:57:32 GMT

←Older revision		Revision as of 19:57, 17 April 2013
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4jpt is ON HOLD	+	The entry 4jpt is ON HOLD until Paper Publication

	Authors: Boyce, S.E., Fischer, M., Fish, I.		Authors: Boyce, S.E., Fischer, M., Fish, I.

	Description: Crystal structure of Cytochrome C Peroxidase W191G-Gateless in complex with quinazoline-2,4-diamine		Description: Crystal structure of Cytochrome C Peroxidase W191G-Gateless in complex with quinazoline-2,4-diamine

OCA: Protected "4jpt" [edit=sysop:move=sysop]

OCA — Wed, 27 Mar 2013 08:22:13 GMT

Protected "4jpt" [edit=sysop:move=sysop]

←Older revision

Revision as of 08:22, 27 March 2013

OCA: New page: '''Unreleased structure''' The entry 4jpt is ON HOLD Authors: Boyce, S.E., Fischer, M., Fish, I. Description: Crystal structure of Cytochrome C Peroxidase W191G-Gateless in complex wit...

OCA — Wed, 27 Mar 2013 08:22:12 GMT

New page: '''Unreleased structure''' The entry 4jpt is ON HOLD Authors: Boyce, S.E., Fischer, M., Fish, I. Description: Crystal structure of Cytochrome C Peroxidase W191G-Gateless in complex wit...

New page

'''Unreleased structure'''

The entry 4jpt is ON HOLD

Authors: Boyce, S.E., Fischer, M., Fish, I.

Description: Crystal structure of Cytochrome C Peroxidase W191G-Gateless in complex with quinazoline-2,4-diamine