4kjn - Revision history

OCA at 16:00, 20 September 2023

OCA — Wed, 20 Sep 2023 16:00:15 GMT

←Older revision		Revision as of 16:00, 20 September 2023
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4kjn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KJN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KJN FirstGlance]. <br>		<table><tr><td colspan='2'>[[4kjn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KJN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KJN FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=THP:THYMIDINE-3,5-DIPHOSPHATE'>THP</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.55Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=THP:THYMIDINE-3,5-DIPHOSPHATE'>THP</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4kjn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kjn OCA], [https://pdbe.org/4kjn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4kjn RCSB], [https://www.ebi.ac.uk/pdbsum/4kjn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4kjn ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4kjn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kjn OCA], [https://pdbe.org/4kjn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4kjn RCSB], [https://www.ebi.ac.uk/pdbsum/4kjn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4kjn ProSAT]</span></td></tr>
	</table>		</table>

OCA at 08:55, 7 December 2022

OCA — Wed, 07 Dec 2022 08:55:09 GMT

←Older revision		Revision as of 08:55, 7 December 2022
Line 1:		Line 1:

	==Crystal structure of Staphylococcal nuclease variant Delta+PHS V23T/V66A/V99T at cryogenic temperature==		==Crystal structure of Staphylococcal nuclease variant Delta+PHS V23T/V66A/V99T at cryogenic temperature==
-	<StructureSection load='4kjn' size='340' side='right' caption='[[4kjn]], [[Resolution\|resolution]] 1.55Å' scene=''>	+	<StructureSection load='4kjn' size='340' side='right'caption='[[4kjn]], [[Resolution\|resolution]] 1.55Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4kjn]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~"micrococcus_aureus"_(rosenbach_1884)_zopf_1885 "micrococcus~~ aureus~~" (rosenbach 1884) zopf 1885~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KJN OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4KJN FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4kjn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KJN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KJN FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=THP:THYMIDINE-3,5-DIPHOSPHATE'>THP</scene~~></td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=THP:THYMIDINE-3,5-DIPHOSPHATE'>THP</scene></td></tr>
-	~~<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3bdc\|3bdc]], [[3nqt\|3nqt]], [[4k5v\|4k5v]]</td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4kjn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kjn OCA], [https://pdbe.org/4kjn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4kjn RCSB], [https://www.ebi.ac.uk/pdbsum/4kjn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4kjn ProSAT]</span></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">nuc ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 "Micrococcus aureus" (Rosenbach 1884) Zopf 1885])</td></tr>	+
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Micrococcal_nuclease Micrococcal nuclease], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.31.1 3.1.31.1] </span></td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4kjn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kjn OCA], [~~http~~://pdbe.org/4kjn PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4kjn RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4kjn PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4kjn ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/NUC_STAAU NUC_STAAU]] Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond.	+	[https://www.uniprot.org/uniprot/NUC_STAAU NUC_STAAU] Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond.

	==See Also==		==See Also==
-	*[[Staphylococcal nuclease\|Staphylococcal nuclease]]	+	*[[Staphylococcal nuclease 3D structures\|Staphylococcal nuclease 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Micrococcal nuclease~~]]	+	[[Category: Large Structures]]
-	[[Category: Caro~~, J A~~]]	+	[[Category: Staphylococcus aureus]]
-	[[Category: ~~E., B~~ Garcia-Moreno]]	+	[[Category: Caro JA]]
-	[[Category: Heroux, A]]	+	[[Category: Garcia-Moreno E B]]
-	[[Category: Schlessman~~, J L]]~~	+	[[Category: Heroux A]]
-	~~[[Category: Cavity]]~~	+	[[Category: Schlessman JL]]
-	~~[[Category: Hydrolase]]~~	+
-	~~[[Category: Hyperstable variant]]~~	+
-	~~[[Category: Pdtp]]~~	+
-	~~[[Category: Pressure]]~~	+
-	~~[[Category: Staphylococcal nuclease~~]]	+

OCA at 08:02, 4 August 2016

OCA — Thu, 04 Aug 2016 08:02:52 GMT

←Older revision		Revision as of 08:02, 4 August 2016
Line 1:		Line 1:
		+
	==Crystal structure of Staphylococcal nuclease variant Delta+PHS V23T/V66A/V99T at cryogenic temperature==		==Crystal structure of Staphylococcal nuclease variant Delta+PHS V23T/V66A/V99T at cryogenic temperature==
	<StructureSection load='4kjn' size='340' side='right' caption='[[4kjn]], [[Resolution\|resolution]] 1.55Å' scene=''>		<StructureSection load='4kjn' size='340' side='right' caption='[[4kjn]], [[Resolution\|resolution]] 1.55Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4kjn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Staphylococcus_aureus Staphylococcus~~ aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KJN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4KJN FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4kjn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"micrococcus_aureus"_(rosenbach_1884)_zopf_1885 "micrococcus aureus" (rosenbach 1884) zopf 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KJN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4KJN FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=THP:THYMIDINE-3,5-DIPHOSPHATE'>THP</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=THP:THYMIDINE-3,5-DIPHOSPHATE'>THP</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3bdc\|3bdc]], [[3nqt\|3nqt]], [[4k5v\|4k5v]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3bdc\|3bdc]], [[3nqt\|3nqt]], [[4k5v\|4k5v]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">nuc ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 ~~Staphylococcus~~ aureus])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">nuc ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 "Micrococcus aureus" (Rosenbach 1884) Zopf 1885])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Micrococcal_nuclease Micrococcal nuclease], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.31.1 3.1.31.1] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Micrococcal_nuclease Micrococcal nuclease], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.31.1 3.1.31.1] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4kjn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kjn OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4kjn RCSB], [http://www.ebi.ac.uk/pdbsum/4kjn PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4kjn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kjn OCA], [http://pdbe.org/4kjn PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4kjn RCSB], [http://www.ebi.ac.uk/pdbsum/4kjn PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4kjn ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 17:		Line 18:
	</StructureSection>		</StructureSection>
	[[Category: Micrococcal nuclease]]		[[Category: Micrococcal nuclease]]
-	[[Category: Staphylococcus aureus]]
	[[Category: Caro, J A]]		[[Category: Caro, J A]]
	[[Category: E., B Garcia-Moreno]]		[[Category: E., B Garcia-Moreno]]

OCA at 07:10, 25 December 2014

OCA — Thu, 25 Dec 2014 07:10:25 GMT

←Older revision		Revision as of 07:10, 25 December 2014
Line 9:		Line 9:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4kjn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kjn OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4kjn RCSB], [http://www.ebi.ac.uk/pdbsum/4kjn PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4kjn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kjn OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4kjn RCSB], [http://www.ebi.ac.uk/pdbsum/4kjn PDBsum]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/NUC_STAAU NUC_STAAU]] Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond.

	==See Also==		==See Also==

OCA at 14:53, 21 December 2014

OCA — Sun, 21 Dec 2014 14:53:42 GMT

←Older revision		Revision as of 14:53, 21 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_4kjn\| PDB=4kjn \| SCENE= }}~~	+	==Crystal structure of Staphylococcal nuclease variant Delta+PHS V23T/V66A/V99T at cryogenic temperature==
-	===Crystal structure of Staphylococcal nuclease variant Delta+PHS V23T/V66A/V99T at cryogenic temperature===	+	<StructureSection load='4kjn' size='340' side='right' caption='[[4kjn]], [[Resolution\|resolution]] 1.55Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[4kjn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KJN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4KJN FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=THP:THYMIDINE-3,5-DIPHOSPHATE'>THP</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3bdc\|3bdc]], [[3nqt\|3nqt]], [[4k5v\|4k5v]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">nuc ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 Staphylococcus aureus])</td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Micrococcal_nuclease Micrococcal nuclease], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.31.1 3.1.31.1] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4kjn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kjn OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4kjn RCSB], [http://www.ebi.ac.uk/pdbsum/4kjn PDBsum]</span></td></tr>
		+	</table>

-	==~~Function~~==	+	==See Also==
-	[[~~http://www.uniprot.org/uniprot/NUC_STAAU NUC_STAAU~~]] ~~Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond.~~	+	*[[Staphylococcal nuclease\|Staphylococcal nuclease]]
-		+	__TOC__
-	~~==About this Structure==~~	+	</StructureSection>
-	~~[[4kjn]] is a 1 chain structure with sequence from [http:~~/~~/en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KJN OCA].~~	+
	[[Category: Micrococcal nuclease]]		[[Category: Micrococcal nuclease]]
	[[Category: Staphylococcus aureus]]		[[Category: Staphylococcus aureus]]
-	[[Category: Caro, J A.]]	+	[[Category: Caro, J A]]
-	[[Category: E., B Garcia-Moreno.]]	+	[[Category: E., B Garcia-Moreno]]
-	[[Category: Heroux, A.]]	+	[[Category: Heroux, A]]
-	[[Category: Schlessman, J L.]]	+	[[Category: Schlessman, J L]]
	[[Category: Cavity]]		[[Category: Cavity]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]

OCA: Protected "4kjn" [edit=sysop:move=sysop]

OCA — Thu, 16 May 2013 07:35:16 GMT

Protected "4kjn" [edit=sysop:move=sysop]

←Older revision

Revision as of 07:35, 16 May 2013

OCA: New page: {{STRUCTURE_4kjn| PDB=4kjn | SCENE= }} ===Crystal structure of Staphylococcal nuclease variant Delta+PHS V23T/V66A/V99T at cryogenic temperature=== ==Function== [[http://www.uniprot....

OCA — Thu, 16 May 2013 07:35:12 GMT

New page: {{STRUCTURE_4kjn| PDB=4kjn | SCENE= }} ===Crystal structure of Staphylococcal nuclease variant Delta+PHS V23T/V66A/V99T at cryogenic temperature=== ==Function== [[http://www.uniprot....

New page

{{STRUCTURE_4kjn| PDB=4kjn | SCENE= }}
===Crystal structure of Staphylococcal nuclease variant Delta+PHS V23T/V66A/V99T at cryogenic temperature===

==Function==
[[http://www.uniprot.org/uniprot/NUC_STAAU NUC_STAAU]] Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond.

==About this Structure==
[[4kjn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KJN OCA].
[[Category: Micrococcal nuclease]]
[[Category: Staphylococcus aureus]]
[[Category: Caro, J A.]]
[[Category: E., B Garcia-Moreno.]]
[[Category: Heroux, A.]]
[[Category: Schlessman, J L.]]
[[Category: Cavity]]
[[Category: Hydrolase]]
[[Category: Hyperstable variant]]
[[Category: Pdtp]]
[[Category: Pressure]]
[[Category: Staphylococcal nuclease]]