4kw9 - Revision history

OCA at 09:18, 7 December 2022

OCA — Wed, 07 Dec 2022 09:18:45 GMT

←Older revision		Revision as of 09:18, 7 December 2022
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	==Crystal Structure of Green Fluorescent Protein==		==Crystal Structure of Green Fluorescent Protein==
-	<StructureSection load='4kw9' size='340' side='right' caption='[[4kw9]], [[Resolution\|resolution]] 1.80Å' scene=''>	+	<StructureSection load='4kw9' size='340' side='right'caption='[[4kw9]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4kw9]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Aeqvi Aeqvi~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KW9 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4KW9 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4kw9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aequorea_victoria Aequorea victoria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KW9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KW9 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, ~~<scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CRO:{2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(4-HYDROXYBENZYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CRO</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	~~<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat">~~<scene name='pdbligand=CRO:{2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(4-HYDROXYBENZYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CRO</scene><~~/td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4kw9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kw9 OCA], [https://pdbe.org/4kw9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4kw9 RCSB], [https://www.ebi.ac.uk/pdbsum/4kw9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4kw9 ProSAT]</span></td></tr>
-	~~<tr id~~='~~related'><td class~~=~~"sblockLbl"><b>[[Related_structure\|Related~~:~~]]</b></td><td class="sblockDat">[[4kw4\|4kw4]], [[4kw8\|4kw8]]</td></tr>~~	+
-	~~<tr id='gene~~'>~~<td class="sblockLbl"><b>[[Gene\|Gene:]]~~</b>~~</td><td class="sblockDat">GFP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6100 AEQVI])~~</td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4kw9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kw9 OCA], [~~http~~://pdbe.org/4kw9 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4kw9 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4kw9 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4kw9 ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/GFP_AEQVI GFP_AEQVI]] Energy-transfer acceptor. Its role is to transduce the blue chemiluminescence of the protein aequorin into green fluorescent light by energy transfer. Fluoresces in vivo upon receiving energy from the Ca(2+)-activated photoprotein aequorin.	+	[https://www.uniprot.org/uniprot/GFP_AEQVI GFP_AEQVI] Energy-transfer acceptor. Its role is to transduce the blue chemiluminescence of the protein aequorin into green fluorescent light by energy transfer. Fluoresces in vivo upon receiving energy from the Ca(2+)-activated photoprotein aequorin.

	==See Also==		==See Also==
-	*[[Green Fluorescent Protein\|Green Fluorescent Protein]]	+	*[[Green Fluorescent Protein 3D structures\|Green Fluorescent Protein 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Aeqvi~~]]	+	[[Category: Aequorea victoria]]
-	[[Category: ~~Barnard, T J~~]]	+	[[Category: Large Structures]]
-	[[Category: ~~Noinaj, N~~]]	+	[[Category: Barnard TJ]]
-	[[Category: ~~Taraska, J W~~]]	+	[[Category: Noinaj N]]
-	[[Category: ~~Yu, X~~]]	+	[[Category: Taraska JW]]
-	[[Category: ~~Beta barrel]]~~	+	[[Category: Yu X]]
-	~~[[Category: Chromophore]]~~	+
-	~~[[Category: Fluorescent protein~~]]	+

OCA at 01:57, 5 August 2016

OCA — Fri, 05 Aug 2016 01:57:03 GMT

←Older revision		Revision as of 01:57, 5 August 2016
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		+
	==Crystal Structure of Green Fluorescent Protein==		==Crystal Structure of Green Fluorescent Protein==
	<StructureSection load='4kw9' size='340' side='right' caption='[[4kw9]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='4kw9' size='340' side='right' caption='[[4kw9]], [[Resolution\|resolution]] 1.80Å' scene=''>
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	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4kw4\|4kw4]], [[4kw8\|4kw8]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4kw4\|4kw4]], [[4kw8\|4kw8]]</td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">GFP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6100 AEQVI])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">GFP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6100 AEQVI])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4kw9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kw9 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4kw9 RCSB], [http://www.ebi.ac.uk/pdbsum/4kw9 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4kw9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kw9 OCA], [http://pdbe.org/4kw9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4kw9 RCSB], [http://www.ebi.ac.uk/pdbsum/4kw9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4kw9 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[http://www.uniprot.org/uniprot/GFP_AEQVI GFP_AEQVI]] Energy-transfer acceptor. Its role is to transduce the blue chemiluminescence of the protein aequorin into green fluorescent light by energy transfer. Fluoresces in vivo upon receiving energy from the Ca(2+)-activated photoprotein aequorin.		[[http://www.uniprot.org/uniprot/GFP_AEQVI GFP_AEQVI]] Energy-transfer acceptor. Its role is to transduce the blue chemiluminescence of the protein aequorin into green fluorescent light by energy transfer. Fluoresces in vivo upon receiving energy from the Ca(2+)-activated photoprotein aequorin.
		+
		+	==See Also==
		+	*[[Green Fluorescent Protein\|Green Fluorescent Protein]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 21:48, 24 December 2014

OCA — Wed, 24 Dec 2014 21:48:35 GMT

←Older revision		Revision as of 21:48, 24 December 2014
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-	~~{{STRUCTURE_4kw9~~\| ~~PDB~~=4kw9 \| ~~SCENE~~= }}	+	==Crystal Structure of Green Fluorescent Protein==
-	===~~Crystal Structure of Green Fluorescent Protein~~===	+	<StructureSection load='4kw9' size='340' side='right' caption='[[4kw9]], [[Resolution\|resolution]] 1.80Å' scene=''>
-		+	== Structural highlights ==
-	==Function==	+	<table><tr><td colspan='2'>[[4kw9]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aeqvi Aeqvi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KW9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4KW9 FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
		+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CRO:{2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(4-HYDROXYBENZYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CRO</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4kw4\|4kw4]], [[4kw8\|4kw8]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">GFP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6100 AEQVI])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4kw9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kw9 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4kw9 RCSB], [http://www.ebi.ac.uk/pdbsum/4kw9 PDBsum]</span></td></tr>
		+	</table>
		+	== Function ==
	[[http://www.uniprot.org/uniprot/GFP_AEQVI GFP_AEQVI]] Energy-transfer acceptor. Its role is to transduce the blue chemiluminescence of the protein aequorin into green fluorescent light by energy transfer. Fluoresces in vivo upon receiving energy from the Ca(2+)-activated photoprotein aequorin.		[[http://www.uniprot.org/uniprot/GFP_AEQVI GFP_AEQVI]] Energy-transfer acceptor. Its role is to transduce the blue chemiluminescence of the protein aequorin into green fluorescent light by energy transfer. Fluoresces in vivo upon receiving energy from the Ca(2+)-activated photoprotein aequorin.
-		+	__TOC__
-	~~==About this Structure==~~	+	</StructureSection>
-	[[~~4kw9~~]] ~~is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KW9 OCA].~~	+	[[Category: Aeqvi]]
-	[[Category: Barnard, T J.]]	+	[[Category: Barnard, T J]]
-	[[Category: Noinaj, N.]]	+	[[Category: Noinaj, N]]
-	[[Category: Taraska, J W.]]	+	[[Category: Taraska, J W]]
-	[[Category: Yu, X.]]	+	[[Category: Yu, X]]
	[[Category: Beta barrel]]		[[Category: Beta barrel]]
	[[Category: Chromophore]]		[[Category: Chromophore]]
	[[Category: Fluorescent protein]]		[[Category: Fluorescent protein]]

OCA at 06:42, 9 April 2014

OCA — Wed, 09 Apr 2014 06:42:52 GMT

←Older revision		Revision as of 06:42, 9 April 2014
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-	~~'''Unreleased structure'''~~	+	{{STRUCTURE_4kw9\| PDB=4kw9 \| SCENE= }}
		+	===Crystal Structure of Green Fluorescent Protein===

-	~~The entry 4kw9~~ is ~~ON HOLD until Paper Publication~~	+	==Function==
		+	[[http://www.uniprot.org/uniprot/GFP_AEQVI GFP_AEQVI]] Energy-transfer acceptor. Its role is to transduce the blue chemiluminescence of the protein aequorin into green fluorescent light by energy transfer. Fluoresces in vivo upon receiving energy from the Ca(2+)-activated photoprotein aequorin.

-	~~Authors~~: Barnard, T.J.~~, Yu, X.,~~ Noinaj, N., Taraska, J.W.	+	==About this Structure==
-		+	[[4kw9]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KW9 OCA].
-	~~Description~~:	+	[[Category: Barnard, T J.]]
		+	[[Category: Noinaj, N.]]
		+	[[Category: Taraska, J W.]]
		+	[[Category: Yu, X.]]
		+	[[Category: Beta barrel]]
		+	[[Category: Chromophore]]
		+	[[Category: Fluorescent protein]]

OCA at 04:44, 18 July 2013

OCA — Thu, 18 Jul 2013 04:44:57 GMT

←Older revision		Revision as of 04:44, 18 July 2013
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4kw9 is ON HOLD	+	The entry 4kw9 is ON HOLD until Paper Publication

	Authors: Barnard, T.J., Yu, X., Noinaj, N., Taraska, J.W.		Authors: Barnard, T.J., Yu, X., Noinaj, N., Taraska, J.W.

	Description:		Description:

OCA: Protected "4kw9" [edit=sysop:move=sysop]

OCA — Wed, 19 Jun 2013 12:08:00 GMT

Protected "4kw9" [edit=sysop:move=sysop]

←Older revision

Revision as of 12:08, 19 June 2013

OCA: New page: '''Unreleased structure''' The entry 4kw9 is ON HOLD Authors: Barnard, T.J., Yu, X., Noinaj, N., Taraska, J.W. Description:

OCA — Wed, 19 Jun 2013 12:07:59 GMT

New page: '''Unreleased structure''' The entry 4kw9 is ON HOLD Authors: Barnard, T.J., Yu, X., Noinaj, N., Taraska, J.W. Description:

New page

'''Unreleased structure'''

The entry 4kw9 is ON HOLD

Authors: Barnard, T.J., Yu, X., Noinaj, N., Taraska, J.W.

Description: