4lij - Revision history

OCA at 11:03, 14 December 2022

OCA — Wed, 14 Dec 2022 11:03:27 GMT

←Older revision		Revision as of 11:03, 14 December 2022
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	==Crystal structure of a far upstream element (FUSE) binding protein 1 (FUBP1) from Homo sapiens at 1.95 A resolution==		==Crystal structure of a far upstream element (FUSE) binding protein 1 (FUBP1) from Homo sapiens at 1.95 A resolution==
-	<StructureSection load='4lij' size='340' side='right' caption='[[4lij]], [[Resolution\|resolution]] 1.80Å' scene=''>	+	<StructureSection load='4lij' size='340' side='right'caption='[[4lij]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4lij]] is a 3 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Human Human~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LIJ OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4LIJ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4lij]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LIJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4LIJ FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"~~><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-	~~<tr~~ id~~='NonStdRes'><td class~~="~~sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat~~"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene><~~/td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4lij FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lij OCA], [https://pdbe.org/4lij PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4lij RCSB], [https://www.ebi.ac.uk/pdbsum/4lij PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4lij ProSAT]</span></td></tr>
-	~~<tr id~~='~~gene'><td class~~=~~"sblockLbl"><b>[[Gene\|Gene~~:~~]]</b~~></td>~~<td class="sblockDat">BC017247, FUBP1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])~~</td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4lij FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lij OCA], [~~http~~://pdbe.org/4lij PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4lij RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4lij PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4lij ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/FUBP1_HUMAN FUBP1_HUMAN]] Regulates MYC expression by binding to a single-stranded far-upstream element (FUSE) upstream of the MYC promoter. May act both as activator and repressor of transcription.<ref>PMID:8125259</ref>	+	[https://www.uniprot.org/uniprot/FUBP1_HUMAN FUBP1_HUMAN] Regulates MYC expression by binding to a single-stranded far-upstream element (FUSE) upstream of the MYC promoter. May act both as activator and repressor of transcription.<ref>PMID:8125259</ref>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Human~~]]	+	[[Category: Homo sapiens]]
-	[[Category: ~~Biology, Partnership for T-Cell~~]]	+	[[Category: Large Structures]]
-	[[Category: ~~Structural genomic]]~~	+	[[Category: Partnership for T-Cell Biology]]
-	~~[[Category: TCELL,~~ Partnership for T-Cell Biology]]	+
-	~~[[Category: Jcsg]]~~	+
-	~~[[Category: Kh domain]]~~	+
-	~~[[Category: Partnership for t-cell biology]]~~	+
-	~~[[Category: Pf00013]]~~	+
-	~~[[Category: PSI, Protein structure initiative]]~~	+
-	~~[[Category: Psi-biology]]~~	+
-	~~[[Category: Rna binding protein]]~~	+
-	~~[[Category: Rna-binding protein]]~~	+
-	~~[[Category: Tcell~~]]	+

OCA at 09:38, 15 November 2017

OCA — Wed, 15 Nov 2017 09:38:53 GMT

←Older revision		Revision as of 09:38, 15 November 2017
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	[[Category: Jcsg]]		[[Category: Jcsg]]
	[[Category: Kh domain]]		[[Category: Kh domain]]
		+	[[Category: Partnership for t-cell biology]]
	[[Category: Pf00013]]		[[Category: Pf00013]]
	[[Category: PSI, Protein structure initiative]]		[[Category: PSI, Protein structure initiative]]
	[[Category: Psi-biology]]		[[Category: Psi-biology]]
		+	[[Category: Rna binding protein]]
	[[Category: Rna-binding protein]]		[[Category: Rna-binding protein]]
		+	[[Category: Tcell]]

OCA at 15:40, 5 August 2016

OCA — Fri, 05 Aug 2016 15:40:45 GMT

←Older revision		Revision as of 15:40, 5 August 2016
Line 1:		Line 1:
		+
	==Crystal structure of a far upstream element (FUSE) binding protein 1 (FUBP1) from Homo sapiens at 1.95 A resolution==		==Crystal structure of a far upstream element (FUSE) binding protein 1 (FUBP1) from Homo sapiens at 1.95 A resolution==
	<StructureSection load='4lij' size='340' side='right' caption='[[4lij]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='4lij' size='340' side='right' caption='[[4lij]], [[Resolution\|resolution]] 1.80Å' scene=''>
Line 6:		Line 7:
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BC017247, FUBP1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BC017247, FUBP1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4lij FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lij OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4lij RCSB], [http://www.ebi.ac.uk/pdbsum/4lij PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4lij FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lij OCA], [http://pdbe.org/4lij PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4lij RCSB], [http://www.ebi.ac.uk/pdbsum/4lij PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4lij ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==

OCA at 19:59, 25 December 2014

OCA — Thu, 25 Dec 2014 19:59:02 GMT

←Older revision		Revision as of 19:59, 25 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_4lij\| PDB=4lij \| SCENE= }}~~	+	==Crystal structure of a far upstream element (FUSE) binding protein 1 (FUBP1) from Homo sapiens at 1.95 A resolution==
-	===Crystal structure of a far upstream element (FUSE) binding protein 1 (FUBP1) from Homo sapiens at 1.95 A resolution===	+	<StructureSection load='4lij' size='340' side='right' caption='[[4lij]], [[Resolution\|resolution]] 1.80Å' scene=''>
-		+	== Structural highlights ==
-	==Function==	+	<table><tr><td colspan='2'>[[4lij]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LIJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4LIJ FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
		+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BC017247, FUBP1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4lij FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lij OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4lij RCSB], [http://www.ebi.ac.uk/pdbsum/4lij PDBsum]</span></td></tr>
		+	</table>
		+	== Function ==
	[[http://www.uniprot.org/uniprot/FUBP1_HUMAN FUBP1_HUMAN]] Regulates MYC expression by binding to a single-stranded far-upstream element (FUSE) upstream of the MYC promoter. May act both as activator and repressor of transcription.<ref>PMID:8125259</ref>		[[http://www.uniprot.org/uniprot/FUBP1_HUMAN FUBP1_HUMAN]] Regulates MYC expression by binding to a single-stranded far-upstream element (FUSE) upstream of the MYC promoter. May act both as activator and repressor of transcription.<ref>PMID:8125259</ref>
-		+	== References ==
-	==~~About this Structure==~~	+	<references/>
-	~~[[4lij]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LIJ OCA].~~	+	__TOC__
-		+	</StructureSection>
-	~~==Reference~~==	+	[[Category: Human]]
-	<references ~~group="xtra"~~/><~~references~~/>	+	[[Category: Biology, Partnership for T-Cell]]
-	[[Category: Biology, Partnership for T-Cell.]]	+	[[Category: Structural genomic]]
-	[[Category: ~~JCSG, Joint Center for~~ Structural ~~Genomics.~~]]	+	[[Category: TCELL, Partnership for T-Cell Biology]]
-	[[Category: TCELL, Partnership for T-Cell Biology.]]	+
	[[Category: Jcsg]]		[[Category: Jcsg]]
-	[[Category: Joint center for structural genomic]]
	[[Category: Kh domain]]		[[Category: Kh domain]]
	[[Category: Pf00013]]		[[Category: Pf00013]]
-	[[Category: Protein structure initiative]]	+	[[Category: PSI, Protein structure initiative]]
	[[Category: Psi-biology]]		[[Category: Psi-biology]]
	[[Category: Rna-binding protein]]		[[Category: Rna-binding protein]]
-	[[Category: Structural genomic]]

OCA at 10:33, 27 November 2013

OCA — Wed, 27 Nov 2013 10:33:22 GMT

←Older revision		Revision as of 10:33, 27 November 2013
Line 1:		Line 1:
-	~~'''Unreleased~~ structure~~'''~~	+	{{STRUCTURE_4lij\| PDB=4lij \| SCENE= }}
		+	===Crystal structure of a far upstream element (FUSE) binding protein 1 (FUBP1) from Homo sapiens at 1.95 A resolution===

-	~~The entry 4lij is ON HOLD~~	+	==Function==
		+	[[http://www.uniprot.org/uniprot/FUBP1_HUMAN FUBP1_HUMAN]] Regulates MYC expression by binding to a single-stranded far-upstream element (FUSE) upstream of the MYC promoter. May act both as activator and repressor of transcription.<ref>PMID:8125259</ref>

-	~~Authors~~: ~~Joint Center for Structural Genomics (JCSG), Partnership for T~~-~~Cell Biology, Partnership for T-Cell Biology (TCELL)~~	+	==About this Structure==
		+	[[4lij]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LIJ OCA].

-	~~Description~~: ~~Crystal~~ structure ~~of a far upstream element (FUSE)~~ binding protein ~~1 (FUBP1) from Homo sapiens at 1.95 A resolution~~	+	==Reference==
		+	<references group="xtra"/><references/>
		+	[[Category: Biology, Partnership for T-Cell.]]
		+	[[Category: JCSG, Joint Center for Structural Genomics.]]
		+	[[Category: TCELL, Partnership for T-Cell Biology.]]
		+	[[Category: Jcsg]]
		+	[[Category: Joint center for structural genomic]]
		+	[[Category: Kh domain]]
		+	[[Category: Pf00013]]
		+	[[Category: Protein structure initiative]]
		+	[[Category: Psi-biology]]
		+	[[Category: Rna-binding protein]]
		+	[[Category: Structural genomic]]

OCA at 12:46, 20 November 2013

OCA — Wed, 20 Nov 2013 12:46:30 GMT

←Older revision		Revision as of 12:46, 20 November 2013
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4lij is ON HOLD ~~until sometime in the future~~	+	The entry 4lij is ON HOLD

-	Authors: Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology	+	Authors: Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology, Partnership for T-Cell Biology (TCELL)

	Description: Crystal structure of a far upstream element (FUSE) binding protein 1 (FUBP1) from Homo sapiens at 1.95 A resolution		Description: Crystal structure of a far upstream element (FUSE) binding protein 1 (FUBP1) from Homo sapiens at 1.95 A resolution

OCA at 04:46, 18 July 2013

OCA — Thu, 18 Jul 2013 04:46:44 GMT

←Older revision		Revision as of 04:46, 18 July 2013
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4lij is ON HOLD	+	The entry 4lij is ON HOLD until sometime in the future

	Authors: Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology		Authors: Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology

	Description: Crystal structure of a far upstream element (FUSE) binding protein 1 (FUBP1) from Homo sapiens at 1.95 A resolution		Description: Crystal structure of a far upstream element (FUSE) binding protein 1 (FUBP1) from Homo sapiens at 1.95 A resolution

OCA: Protected "4lij" [edit=sysop:move=sysop]

OCA — Wed, 10 Jul 2013 15:11:59 GMT

Protected "4lij" [edit=sysop:move=sysop]

←Older revision

Revision as of 15:11, 10 July 2013

OCA: New page: '''Unreleased structure''' The entry 4lij is ON HOLD Authors: Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology Description: Crystal structure of a far upstre...

OCA — Wed, 10 Jul 2013 15:11:59 GMT

New page: '''Unreleased structure''' The entry 4lij is ON HOLD Authors: Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology Description: Crystal structure of a far upstre...

New page

'''Unreleased structure'''

The entry 4lij is ON HOLD

Authors: Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology

Description: Crystal structure of a far upstream element (FUSE) binding protein 1 (FUBP1) from Homo sapiens at 1.95 A resolution