4mah - Revision history

OCA at 11:06, 21 December 2022

OCA — Wed, 21 Dec 2022 11:06:19 GMT

←Older revision		Revision as of 11:06, 21 December 2022
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	==Structure of Aspergillus oryzae AA11 Lytic Polysaccharide Monooxygenase with Zn==		==Structure of Aspergillus oryzae AA11 Lytic Polysaccharide Monooxygenase with Zn==
-	<StructureSection load='4mah' size='340' side='right' caption='[[4mah]], [[Resolution\|resolution]] 1.55Å' scene=''>	+	<StructureSection load='4mah' size='340' side='right'caption='[[4mah]], [[Resolution\|resolution]] 1.55Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4mah]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Aspoz Aspoz~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MAH OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4MAH FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4mah]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aspergillus_oryzae Aspergillus oryzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MAH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4MAH FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>~~</td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	~~<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4mai\|4mai]]</td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4mah FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4mah OCA], [https://pdbe.org/4mah PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4mah RCSB], [https://www.ebi.ac.uk/pdbsum/4mah PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4mah ProSAT]</span></td></tr>
-	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AO090102000501 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5062 ASPOZ])~~</td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4mah FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4mah OCA], [~~http~~://pdbe.org/4mah PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4mah RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4mah PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4mah ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q2UA85_ASPOR Q2UA85_ASPOR]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
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	</div>		</div>
	<div class="pdbe-citations 4mah" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 4mah" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Monooxygenase 3D structures\|Monooxygenase 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Aspoz~~]]	+	[[Category: Aspergillus oryzae]]
-	[[Category: ~~Davies, G J~~]]	+	[[Category: Large Structures]]
-	[[Category: ~~Hemsworth, G R~~]]	+	[[Category: Davies GJ]]
-	[[Category: ~~Henrissat, B~~]]	+	[[Category: Hemsworth GR]]
-	[[Category: ~~Walton, P H~~]]	+	[[Category: Henrissat B]]
-	[[Category: ~~Aa11]]~~	+	[[Category: Walton PH]]
-	~~[[Category: Chitin degradation]]~~	+
-	~~[[Category: Chitin oxidation]]~~	+
-	~~[[Category: Gh61]]~~	+
-	~~[[Category: Oxidoreductase~~]]	+

OCA at 07:14, 23 December 2016

OCA — Fri, 23 Dec 2016 07:14:40 GMT

←Older revision		Revision as of 07:14, 23 December 2016
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		+
	==Structure of Aspergillus oryzae AA11 Lytic Polysaccharide Monooxygenase with Zn==		==Structure of Aspergillus oryzae AA11 Lytic Polysaccharide Monooxygenase with Zn==
	<StructureSection load='4mah' size='340' side='right' caption='[[4mah]], [[Resolution\|resolution]] 1.55Å' scene=''>		<StructureSection load='4mah' size='340' side='right' caption='[[4mah]], [[Resolution\|resolution]] 1.55Å' scene=''>
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	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4mai\|4mai]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4mai\|4mai]]</td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AO090102000501 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5062 ASPOZ])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AO090102000501 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5062 ASPOZ])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4mah FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4mah OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4mah RCSB], [http://www.ebi.ac.uk/pdbsum/4mah PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4mah FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4mah OCA], [http://pdbe.org/4mah PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4mah RCSB], [http://www.ebi.ac.uk/pdbsum/4mah PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4mah ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
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	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 4mah" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 07:55, 15 February 2015

OCA — Sun, 15 Feb 2015 07:55:52 GMT

←Older revision		Revision as of 07:55, 15 February 2015
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-	~~{{STRUCTURE_4mah\| PDB=4mah \| SCENE= }}~~	+	==Structure of Aspergillus oryzae AA11 Lytic Polysaccharide Monooxygenase with Zn==
-	===Structure of Aspergillus oryzae AA11 Lytic Polysaccharide Monooxygenase with Zn===	+	<StructureSection load='4mah' size='340' side='right' caption='[[4mah]], [[Resolution\|resolution]] 1.55Å' scene=''>
-	~~{{ABSTRACT_PUBMED_24362702}}~~	+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[4mah]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aspoz Aspoz]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MAH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4MAH FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4mai\|4mai]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AO090102000501 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5062 ASPOZ])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4mah FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4mah OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4mah RCSB], [http://www.ebi.ac.uk/pdbsum/4mah PDBsum]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Lytic polysaccharide monooxygenases (LPMOs) are a recently discovered class of enzymes capable of oxidizing recalcitrant polysaccharides. They are attracting considerable attention owing to their potential use in biomass conversion, notably in the production of biofuels. Previous studies have identified two discrete sequence-based families of these enzymes termed AA9 (formerly GH61) and AA10 (formerly CBM33). Here, we report the discovery of a third family of LPMOs. Using a chitin-degrading exemplar from Aspergillus oryzae, we show that the three-dimensional structure of the enzyme shares some features of the previous two classes of LPMOs, including a copper active center featuring the 'histidine brace' active site, but is distinct in terms of its active site details and its EPR spectroscopy. The newly characterized AA11 family expands the LPMO clan, potentially broadening both the range of potential substrates and the types of reactive copper-oxygen species formed at the active site of LPMOs.

-	~~==About this Structure==~~	+	Discovery and characterization of a new family of lytic polysaccharide monooxygenases.,Hemsworth GR, Henrissat B, Davies GJ, Walton PH Nat Chem Biol. 2014 Feb;10(2):122-6. doi: 10.1038/nchembio.1417. Epub 2013 Dec, 22. PMID:24362702<ref>PMID:24362702</ref>
-	~~[[4mah]] is~~ a ~~1 chain structure~~. ~~Full crystallographic information is available from [http~~:/~~/oca~~.~~weizmann~~.ac.il/~~oca-bin/ocashort?id=4MAH OCA].~~	+

-	==~~Reference~~==	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	~~<ref group="xtra">PMID:024362702</ref>~~<references ~~group="xtra"~~/><~~references~~/>	+	</div>
-	[[Category: Davies, G J.]]	+	== References ==
-	[[Category: Hemsworth, G R.]]	+	<references/>
-	[[Category: Henrissat, B.]]	+	__TOC__
-	[[Category: Walton, P H.]]	+	</StructureSection>
		+	[[Category: Aspoz]]
		+	[[Category: Davies, G J]]
		+	[[Category: Hemsworth, G R]]
		+	[[Category: Henrissat, B]]
		+	[[Category: Walton, P H]]
	[[Category: Aa11]]		[[Category: Aa11]]
	[[Category: Chitin degradation]]		[[Category: Chitin degradation]]

OCA at 05:47, 22 January 2014

OCA — Wed, 22 Jan 2014 05:47:28 GMT

←Older revision		Revision as of 05:47, 22 January 2014
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	{{STRUCTURE_4mah\| PDB=4mah \| SCENE= }}		{{STRUCTURE_4mah\| PDB=4mah \| SCENE= }}
	===Structure of Aspergillus oryzae AA11 Lytic Polysaccharide Monooxygenase with Zn===		===Structure of Aspergillus oryzae AA11 Lytic Polysaccharide Monooxygenase with Zn===
		+	{{ABSTRACT_PUBMED_24362702}}

	==About this Structure==		==About this Structure==
	[[4mah]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MAH OCA].		[[4mah]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MAH OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:024362702</ref><references group="xtra"/><references/>
	[[Category: Davies, G J.]]		[[Category: Davies, G J.]]
	[[Category: Hemsworth, G R.]]		[[Category: Hemsworth, G R.]]

OCA at 10:40, 18 December 2013

OCA — Wed, 18 Dec 2013 10:40:13 GMT

←Older revision		Revision as of 10:40, 18 December 2013
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-	~~'''Unreleased structure'''~~	+	{{STRUCTURE_4mah\| PDB=4mah \| SCENE= }}
		+	===Structure of Aspergillus oryzae AA11 Lytic Polysaccharide Monooxygenase with Zn===

-	~~The entry~~ 4mah is ~~ON HOLD until Paper Publication~~	+	==About this Structure==
-		+	[[4mah]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MAH OCA].
-	~~Authors~~: Hemsworth, G.R., Henrissat, B., Walton, P.H.~~, Davies, G.J.~~	+	[[Category: Davies, G J.]]
-		+	[[Category: Hemsworth, G R.]]
-	~~Description~~:	+	[[Category: Henrissat, B.]]
		+	[[Category: Walton, P H.]]
		+	[[Category: Aa11]]
		+	[[Category: Chitin degradation]]
		+	[[Category: Chitin oxidation]]
		+	[[Category: Gh61]]
		+	[[Category: Oxidoreductase]]

OCA at 07:35, 29 September 2013

OCA — Sun, 29 Sep 2013 07:35:09 GMT

←Older revision		Revision as of 07:35, 29 September 2013
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4mah is ON HOLD	+	The entry 4mah is ON HOLD until Paper Publication

	Authors: Hemsworth, G.R., Henrissat, B., Walton, P.H., Davies, G.J.		Authors: Hemsworth, G.R., Henrissat, B., Walton, P.H., Davies, G.J.

	Description:		Description:

OCA at 10:00, 4 September 2013

OCA — Wed, 04 Sep 2013 10:00:25 GMT

←Older revision		Revision as of 10:00, 4 September 2013
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	Authors: Hemsworth, G.R., Henrissat, B., Walton, P.H., Davies, G.J.		Authors: Hemsworth, G.R., Henrissat, B., Walton, P.H., Davies, G.J.

-	Description: ~~Protein Structure 1~~	+	Description:

OCA: Protected "4mah" [edit=sysop:move=sysop]

OCA — Wed, 28 Aug 2013 06:55:00 GMT

Protected "4mah" [edit=sysop:move=sysop]

←Older revision

Revision as of 06:55, 28 August 2013

OCA: New page: '''Unreleased structure''' The entry 4mah is ON HOLD Authors: Hemsworth, G.R., Henrissat, B., Walton, P.H., Davies, G.J. Description: Protein Structure 1

OCA — Wed, 28 Aug 2013 06:54:59 GMT

New page: '''Unreleased structure''' The entry 4mah is ON HOLD Authors: Hemsworth, G.R., Henrissat, B., Walton, P.H., Davies, G.J. Description: Protein Structure 1

New page

'''Unreleased structure'''

The entry 4mah is ON HOLD

Authors: Hemsworth, G.R., Henrissat, B., Walton, P.H., Davies, G.J.

Description: Protein Structure 1