4msf - Revision history

OCA at 14:44, 8 November 2023

OCA — Wed, 08 Nov 2023 14:44:25 GMT

←Older revision		Revision as of 14:44, 8 November 2023
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4msf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Capra_hircus Capra hircus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MSF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4MSF FirstGlance]. <br>		<table><tr><td colspan='2'>[[4msf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Capra_hircus Capra hircus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MSF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4MSF FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3HY:3-(HYDROXYMETHYL)PHENOL'>3HY</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=SCN:THIOCYANATE+ION'>SCN</scene>, <scene name='pdbligand=SEP:PHOSPHOSERINE'>SEP</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.98Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3HY:3-(HYDROXYMETHYL)PHENOL'>3HY</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=SCN:THIOCYANATE+ION'>SCN</scene>, <scene name='pdbligand=SEP:PHOSPHOSERINE'>SEP</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4msf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4msf OCA], [https://pdbe.org/4msf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4msf RCSB], [https://www.ebi.ac.uk/pdbsum/4msf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4msf ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4msf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4msf OCA], [https://pdbe.org/4msf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4msf RCSB], [https://www.ebi.ac.uk/pdbsum/4msf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4msf ProSAT]</span></td></tr>
	</table>		</table>

OCA at 10:05, 28 December 2022

OCA — Wed, 28 Dec 2022 10:05:22 GMT

←Older revision		Revision as of 10:05, 28 December 2022
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	<StructureSection load='4msf' size='340' side='right'caption='[[4msf]], [[Resolution\|resolution]] 1.98Å' scene=''>		<StructureSection load='4msf' size='340' side='right'caption='[[4msf]], [[Resolution\|resolution]] 1.98Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4msf]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Capra_hircus Capra hircus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MSF OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4MSF FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4msf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Capra_hircus Capra hircus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MSF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4MSF FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=3HY:3-(HYDROXYMETHYL)PHENOL'>3HY</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=SCN:THIOCYANATE+ION'>SCN</scene>~~</td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3HY:3-(HYDROXYMETHYL)PHENOL'>3HY</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=SCN:THIOCYANATE+ION'>SCN</scene>, <scene name='pdbligand=SEP:PHOSPHOSERINE'>SEP</scene></td></tr>
-	~~<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat">~~<scene name='pdbligand=SEP:PHOSPHOSERINE'>SEP</scene~~></td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4msf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4msf OCA], [https://pdbe.org/4msf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4msf RCSB], [https://www.ebi.ac.uk/pdbsum/4msf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4msf ProSAT]</span></td></tr>
-	~~<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3gc1\|3gc1]]</td></tr>~~	+
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peroxidase Peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.7 1.11.1.7] </span></td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4msf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4msf OCA], [~~http~~://pdbe.org/4msf PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4msf RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4msf PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4msf ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/PERL_CAPHI PERL_CAPHI] Antimicrobial agent which utilizes hydrogen peroxide and thiocyanate (SCN) to generate the antimicrobial substance hypothiocyanous acid (HOSCN) (PubMed:10894086). May protect the udder from infection and promote growth in newborns. Inhibits growth of several fungi including A.niger, Trichoderma species, C.cassicola, P.meadii and C.salmonicolor (PubMed:10894086). Does not have anti-fungal activity towards C.albicans and Pythium species (PubMed:10894086). Inhibits growth of several Gram-positive bacteria including some Staphylococcus species and Gram-negative bacteria including E.coli, P.aeruginosa and some Salmonella species (PubMed:10894086).<ref>PMID:10894086</ref>

	==See Also==		==See Also==
	*[[Lactoperoxidase\|Lactoperoxidase]]		*[[Lactoperoxidase\|Lactoperoxidase]]
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Capra hircus]]		[[Category: Capra hircus]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	~~[[Category: Peroxidase]]~~	+	[[Category: Bhushan A]]
-	[[Category: Bhushan, A]]	+	[[Category: Kaur P]]
-	[[Category: Kaur, P]]	+	[[Category: Sharma S]]
-	[[Category: Sharma, S]]	+	[[Category: Singh A]]
-	[[Category: Singh, A]]	+	[[Category: Singh AK]]
-	[[Category: Singh~~, A K~~]]	+	[[Category: Singh RP]]
-	[[Category: Singh~~, R P~~]]	+	[[Category: Singh TP]]
-	[[Category: Singh~~, T P~~]]	+	[[Category: Sinha M]]
-	[[Category: Sinha, M]]	+
-	~~[[Category: Oxidoreductase~~]]	+

OCA at 08:51, 10 April 2019

OCA — Wed, 10 Apr 2019 08:51:53 GMT

←Older revision		Revision as of 08:51, 10 April 2019
Line 1:		Line 1:

	==Crystal structure of the complex of goat lactoperoxidase with 3-hydroxymethyl phenol at 1.98 Angstrom resolution==		==Crystal structure of the complex of goat lactoperoxidase with 3-hydroxymethyl phenol at 1.98 Angstrom resolution==
-	<StructureSection load='4msf' size='340' side='right' caption='[[4msf]], [[Resolution\|resolution]] 1.98Å' scene=''>	+	<StructureSection load='4msf' size='340' side='right'caption='[[4msf]], [[Resolution\|resolution]] 1.98Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4msf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Capra_hircus Capra hircus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MSF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4MSF FirstGlance]. <br>		<table><tr><td colspan='2'>[[4msf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Capra_hircus Capra hircus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MSF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4MSF FirstGlance]. <br>
Line 16:		Line 16:
	</StructureSection>		</StructureSection>
	[[Category: Capra hircus]]		[[Category: Capra hircus]]
		+	[[Category: Large Structures]]
	[[Category: Peroxidase]]		[[Category: Peroxidase]]
	[[Category: Bhushan, A]]		[[Category: Bhushan, A]]

OCA at 06:10, 5 August 2016

OCA — Fri, 05 Aug 2016 06:10:47 GMT

←Older revision		Revision as of 06:10, 5 August 2016
Line 1:		Line 1:
		+
	==Crystal structure of the complex of goat lactoperoxidase with 3-hydroxymethyl phenol at 1.98 Angstrom resolution==		==Crystal structure of the complex of goat lactoperoxidase with 3-hydroxymethyl phenol at 1.98 Angstrom resolution==
	<StructureSection load='4msf' size='340' side='right' caption='[[4msf]], [[Resolution\|resolution]] 1.98Å' scene=''>		<StructureSection load='4msf' size='340' side='right' caption='[[4msf]], [[Resolution\|resolution]] 1.98Å' scene=''>
Line 7:		Line 8:
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3gc1\|3gc1]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3gc1\|3gc1]]</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peroxidase Peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.7 1.11.1.7] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peroxidase Peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.7 1.11.1.7] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4msf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4msf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4msf RCSB], [http://www.ebi.ac.uk/pdbsum/4msf PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4msf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4msf OCA], [http://pdbe.org/4msf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4msf RCSB], [http://www.ebi.ac.uk/pdbsum/4msf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4msf ProSAT]</span></td></tr>
	</table>		</table>

OCA at 14:55, 21 December 2014

OCA — Sun, 21 Dec 2014 14:55:22 GMT

←Older revision		Revision as of 14:55, 21 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_4msf\| PDB=4msf \| SCENE= }}~~	+	==Crystal structure of the complex of goat lactoperoxidase with 3-hydroxymethyl phenol at 1.98 Angstrom resolution==
-	===Crystal structure of the complex of goat lactoperoxidase with 3-hydroxymethyl phenol at 1.98 Angstrom resolution===	+	<StructureSection load='4msf' size='340' side='right' caption='[[4msf]], [[Resolution\|resolution]] 1.98Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[4msf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Capra_hircus Capra hircus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MSF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4MSF FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=3HY:3-(HYDROXYMETHYL)PHENOL'>3HY</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=SCN:THIOCYANATE+ION'>SCN</scene></td></tr>
		+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=SEP:PHOSPHOSERINE'>SEP</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3gc1\|3gc1]]</td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peroxidase Peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.7 1.11.1.7] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4msf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4msf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4msf RCSB], [http://www.ebi.ac.uk/pdbsum/4msf PDBsum]</span></td></tr>
		+	</table>

-	==~~About this Structure~~==	+	==See Also==
-	[[~~4msf~~]] ~~is a 1 chain structure with sequence from [http:~~/~~/en.wikipedia.org/wiki/Capra_hircus Capra hircus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MSF OCA].~~	+	*[[Lactoperoxidase\|Lactoperoxidase]]
		+	__TOC__
		+	</StructureSection>
	[[Category: Capra hircus]]		[[Category: Capra hircus]]
	[[Category: Peroxidase]]		[[Category: Peroxidase]]
-	[[Category: Bhushan, A.]]	+	[[Category: Bhushan, A]]
-	[[Category: Kaur, P.]]	+	[[Category: Kaur, P]]
-	[[Category: Sharma, S.]]	+	[[Category: Sharma, S]]
-	[[Category: Singh, A.]]	+	[[Category: Singh, A]]
-	[[Category: Singh, A K.]]	+	[[Category: Singh, A K]]
-	[[Category: Singh, R P.]]	+	[[Category: Singh, R P]]
-	[[Category: Singh, T P.]]	+	[[Category: Singh, T P]]
-	[[Category: Sinha, M.]]	+	[[Category: Sinha, M]]
	[[Category: Oxidoreductase]]		[[Category: Oxidoreductase]]
-	[[Category: Peroxidase]]

OCA at 06:56, 23 October 2013

OCA — Wed, 23 Oct 2013 06:56:33 GMT

←Older revision		Revision as of 06:56, 23 October 2013
Line 1:		Line 1:
-	~~'''Unreleased~~ structure~~'''~~	+	{{STRUCTURE_4msf\| PDB=4msf \| SCENE= }}
		+	===Crystal structure of the complex of goat lactoperoxidase with 3-hydroxymethyl phenol at 1.98 Angstrom resolution===

-	~~The entry~~ 4msf is ~~ON HOLD~~	+	==About this Structure==
-		+	[[4msf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Capra_hircus Capra hircus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MSF OCA].
-	~~Authors~~: ~~Singh~~, A., ~~Singh, R.~~P., ~~Sinha, M~~., Singh, A.~~K., Bhushan~~, A., ~~Kaur,~~ P.~~, Sharma, S.,~~ Singh, T.P.	+	[[Category: Capra hircus]]
-		+	[[Category: Peroxidase]]
-	~~Description~~: ~~Crystal structure of the complex of goat lactoperoxidase with 3-hydroxymethyl phenol at 1~~.~~98 Angstrom resolution~~	+	[[Category: Bhushan, A.]]
		+	[[Category: Kaur, P.]]
		+	[[Category: Sharma, S.]]
		+	[[Category: Singh, A.]]
		+	[[Category: Singh, A K.]]
		+	[[Category: Singh, R P.]]
		+	[[Category: Singh, T P.]]
		+	[[Category: Sinha, M.]]
		+	[[Category: Oxidoreductase]]
		+	[[Category: Peroxidase]]

OCA: Protected "4msf" [edit=sysop:move=sysop]

OCA — Sun, 29 Sep 2013 07:43:49 GMT

Protected "4msf" [edit=sysop:move=sysop]

←Older revision

Revision as of 07:43, 29 September 2013

OCA: New page: '''Unreleased structure''' The entry 4msf is ON HOLD Authors: Singh, A., Singh, R.P., Sinha, M., Singh, A.K., Bhushan, A., Kaur, P., Sharma, S., Singh, T.P. Description: Crystal struct...

OCA — Sun, 29 Sep 2013 07:43:47 GMT

New page: '''Unreleased structure''' The entry 4msf is ON HOLD Authors: Singh, A., Singh, R.P., Sinha, M., Singh, A.K., Bhushan, A., Kaur, P., Sharma, S., Singh, T.P. Description: Crystal struct...

New page

'''Unreleased structure'''

The entry 4msf is ON HOLD

Authors: Singh, A., Singh, R.P., Sinha, M., Singh, A.K., Bhushan, A., Kaur, P., Sharma, S., Singh, T.P.

Description: Crystal structure of the complex of goat lactoperoxidase with 3-hydroxymethyl phenol at 1.98 Angstrom resolution