4nmz - Revision history

OCA at 17:00, 20 September 2023

OCA — Wed, 20 Sep 2023 17:00:18 GMT

←Older revision		Revision as of 17:00, 20 September 2023
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4nmz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NMZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4NMZ FirstGlance]. <br>		<table><tr><td colspan='2'>[[4nmz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NMZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4NMZ FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=THP:THYMIDINE-3,5-DIPHOSPHATE'>THP</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.7Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=THP:THYMIDINE-3,5-DIPHOSPHATE'>THP</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4nmz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4nmz OCA], [https://pdbe.org/4nmz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4nmz RCSB], [https://www.ebi.ac.uk/pdbsum/4nmz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4nmz ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4nmz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4nmz OCA], [https://pdbe.org/4nmz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4nmz RCSB], [https://www.ebi.ac.uk/pdbsum/4nmz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4nmz ProSAT]</span></td></tr>
	</table>		</table>

OCA at 08:35, 11 January 2023

OCA — Wed, 11 Jan 2023 08:35:47 GMT

←Older revision		Revision as of 08:35, 11 January 2023
Line 1:		Line 1:

	==Crystal structure of Staphylococcal nuclease variant Delta+PHS V23Q/V66A at cryogenic temperature==		==Crystal structure of Staphylococcal nuclease variant Delta+PHS V23Q/V66A at cryogenic temperature==
-	<StructureSection load='4nmz' size='340' side='right' caption='[[4nmz]], [[Resolution\|resolution]] 1.70Å' scene=''>	+	<StructureSection load='4nmz' size='340' side='right'caption='[[4nmz]], [[Resolution\|resolution]] 1.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4nmz]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~"micrococcus_aureus"_(rosenbach_1884)_zopf_1885 "micrococcus~~ aureus~~" (rosenbach 1884) zopf 1885~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NMZ OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4NMZ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4nmz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NMZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4NMZ FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=THP:THYMIDINE-3,5-DIPHOSPHATE'>THP</scene~~></td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=THP:THYMIDINE-3,5-DIPHOSPHATE'>THP</scene></td></tr>
-	~~<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3bdc\|3bdc]], [[4me5\|4me5]], [[4khv\|4khv]], [[3pmf\|3pmf]], [[4nkl\|4nkl]]</td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4nmz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4nmz OCA], [https://pdbe.org/4nmz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4nmz RCSB], [https://www.ebi.ac.uk/pdbsum/4nmz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4nmz ProSAT]</span></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">nuc ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 "Micrococcus aureus" (Rosenbach 1884) Zopf 1885])</td></tr>	+
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Micrococcal_nuclease Micrococcal nuclease], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.31.1 3.1.31.1] </span></td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4nmz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4nmz OCA], [~~http~~://pdbe.org/4nmz PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4nmz RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4nmz PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4nmz ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/NUC_STAAU NUC_STAAU]] Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond.	+	[https://www.uniprot.org/uniprot/NUC_STAAU NUC_STAAU] Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond.
		+
		+	==See Also==
		+	*[[Staphylococcal nuclease 3D structures\|Staphylococcal nuclease 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Micrococcal nuclease~~]]	+	[[Category: Large Structures]]
-	[[Category: Caro~~, J A~~]]	+	[[Category: Staphylococcus aureus]]
-	[[Category: ~~E., B~~ Garcia-Moreno]]	+	[[Category: Caro JA]]
-	[[Category: Heroux, A]]	+	[[Category: Garcia-Moreno E B]]
-	[[Category: Schlessman~~, J L~~]]	+	[[Category: Heroux A]]
-	[[Category: Sorenson~~, J L]]~~	+	[[Category: Schlessman JL]]
-	~~[[Category: Cavity]]~~	+	[[Category: Sorenson JL]]
-	~~[[Category: Hydrolase]]~~	+
-	~~[[Category: Hyperstable variant]]~~	+
-	~~[[Category: Pdtp]]~~	+
-	~~[[Category: Pressure]]~~	+
-	~~[[Category: Staphylococcal nuclease~~]]	+

OCA at 08:15, 22 November 2017

OCA — Wed, 22 Nov 2017 08:15:23 GMT

←Older revision		Revision as of 08:15, 22 November 2017
Line 12:		Line 12:
	== Function ==		== Function ==
	[[http://www.uniprot.org/uniprot/NUC_STAAU NUC_STAAU]] Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond.		[[http://www.uniprot.org/uniprot/NUC_STAAU NUC_STAAU]] Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond.
-
-	==See Also==
-	*[[Staphylococcal nuclease\|Staphylococcal nuclease]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 05:03, 5 August 2016

OCA — Fri, 05 Aug 2016 05:03:30 GMT

←Older revision		Revision as of 05:03, 5 August 2016
Line 1:		Line 1:
		+
	==Crystal structure of Staphylococcal nuclease variant Delta+PHS V23Q/V66A at cryogenic temperature==		==Crystal structure of Staphylococcal nuclease variant Delta+PHS V23Q/V66A at cryogenic temperature==
	<StructureSection load='4nmz' size='340' side='right' caption='[[4nmz]], [[Resolution\|resolution]] 1.70Å' scene=''>		<StructureSection load='4nmz' size='340' side='right' caption='[[4nmz]], [[Resolution\|resolution]] 1.70Å' scene=''>
Line 7:		Line 8:
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">nuc ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 "Micrococcus aureus" (Rosenbach 1884) Zopf 1885])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">nuc ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 "Micrococcus aureus" (Rosenbach 1884) Zopf 1885])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Micrococcal_nuclease Micrococcal nuclease], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.31.1 3.1.31.1] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Micrococcal_nuclease Micrococcal nuclease], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.31.1 3.1.31.1] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4nmz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4nmz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4nmz RCSB], [http://www.ebi.ac.uk/pdbsum/4nmz PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4nmz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4nmz OCA], [http://pdbe.org/4nmz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4nmz RCSB], [http://www.ebi.ac.uk/pdbsum/4nmz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4nmz ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==

OCA at 23:12, 24 December 2014

OCA — Wed, 24 Dec 2014 23:12:47 GMT

←Older revision		Revision as of 23:12, 24 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_4nmz\| PDB=4nmz \| SCENE= }}~~	+	==Crystal structure of Staphylococcal nuclease variant Delta+PHS V23Q/V66A at cryogenic temperature==
-	===Crystal structure of Staphylococcal nuclease variant Delta+PHS V23Q/V66A at cryogenic temperature===	+	<StructureSection load='4nmz' size='340' side='right' caption='[[4nmz]], [[Resolution\|resolution]] 1.70Å' scene=''>
-		+	== Structural highlights ==
-	==Function==	+	<table><tr><td colspan='2'>[[4nmz]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"micrococcus_aureus"_(rosenbach_1884)_zopf_1885 "micrococcus aureus" (rosenbach 1884) zopf 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NMZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4NMZ FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=THP:THYMIDINE-3,5-DIPHOSPHATE'>THP</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3bdc\|3bdc]], [[4me5\|4me5]], [[4khv\|4khv]], [[3pmf\|3pmf]], [[4nkl\|4nkl]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">nuc ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 "Micrococcus aureus" (Rosenbach 1884) Zopf 1885])</td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Micrococcal_nuclease Micrococcal nuclease], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.31.1 3.1.31.1] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4nmz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4nmz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4nmz RCSB], [http://www.ebi.ac.uk/pdbsum/4nmz PDBsum]</span></td></tr>
		+	</table>
		+	== Function ==
	[[http://www.uniprot.org/uniprot/NUC_STAAU NUC_STAAU]] Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond.		[[http://www.uniprot.org/uniprot/NUC_STAAU NUC_STAAU]] Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond.

-	==~~About this Structure~~==	+	==See Also==
-	[[~~4nmz~~]] ~~is a 1 chain structure. Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=4NMZ OCA].~~	+	*[[Staphylococcal nuclease\|Staphylococcal nuclease]]
		+	__TOC__
		+	</StructureSection>
	[[Category: Micrococcal nuclease]]		[[Category: Micrococcal nuclease]]
-	[[Category: Caro, J A.]]	+	[[Category: Caro, J A]]
-	[[Category: E., B Garcia-Moreno.]]	+	[[Category: E., B Garcia-Moreno]]
-	[[Category: Heroux, A.]]	+	[[Category: Heroux, A]]
-	[[Category: Schlessman, J L.]]	+	[[Category: Schlessman, J L]]
-	[[Category: Sorenson, J L.]]	+	[[Category: Sorenson, J L]]
	[[Category: Cavity]]		[[Category: Cavity]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]

OCA at 13:55, 11 December 2013

OCA — Wed, 11 Dec 2013 13:55:04 GMT

←Older revision		Revision as of 13:55, 11 December 2013
Line 1:		Line 1:
-	~~'''Unreleased~~ structure~~'''~~	+	{{STRUCTURE_4nmz\| PDB=4nmz \| SCENE= }}
		+	===Crystal structure of Staphylococcal nuclease variant Delta+PHS V23Q/V66A at cryogenic temperature===

-	~~The entry 4nmz is ON HOLD~~	+	==Function==
		+	[[http://www.uniprot.org/uniprot/NUC_STAAU NUC_STAAU]] Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond.

-	~~Authors~~: ~~Caro, J~~.A.~~, Sorenson, J~~.L.~~, Schlessman~~, J.L., Heroux, A., ~~Garcia-Moreno E~~., B.	+	==About this Structure==
-		+	[[4nmz]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NMZ OCA].
-	~~Description~~: ~~Crystal structure of~~ Staphylococcal nuclease ~~variant Delta+PHS V23Q/V66A at cryogenic temperature~~	+	[[Category: Micrococcal nuclease]]
		+	[[Category: Caro, J A.]]
		+	[[Category: E., B Garcia-Moreno.]]
		+	[[Category: Heroux, A.]]
		+	[[Category: Schlessman, J L.]]
		+	[[Category: Sorenson, J L.]]
		+	[[Category: Cavity]]
		+	[[Category: Hydrolase]]
		+	[[Category: Hyperstable variant]]
		+	[[Category: Pdtp]]
		+	[[Category: Pressure]]
		+	[[Category: Staphylococcal nuclease]]

OCA: Protected "4nmz" [edit=sysop:move=sysop]

OCA — Wed, 27 Nov 2013 09:51:39 GMT

Protected "4nmz" [edit=sysop:move=sysop]

←Older revision

Revision as of 09:51, 27 November 2013

OCA: New page: '''Unreleased structure''' The entry 4nmz is ON HOLD Authors: Caro, J.A., Sorenson, J.L., Schlessman, J.L., Heroux, A., Garcia-Moreno E., B. Description: Crystal structure of Staphyloc...

OCA — Wed, 27 Nov 2013 09:51:38 GMT

New page: '''Unreleased structure''' The entry 4nmz is ON HOLD Authors: Caro, J.A., Sorenson, J.L., Schlessman, J.L., Heroux, A., Garcia-Moreno E., B. Description: Crystal structure of Staphyloc...

New page

'''Unreleased structure'''

The entry 4nmz is ON HOLD

Authors: Caro, J.A., Sorenson, J.L., Schlessman, J.L., Heroux, A., Garcia-Moreno E., B.

Description: Crystal structure of Staphylococcal nuclease variant Delta+PHS V23Q/V66A at cryogenic temperature