4p8w - Revision history

OCA at 00:41, 28 December 2023

OCA — Thu, 28 Dec 2023 00:41:28 GMT

←Older revision		Revision as of 00:41, 28 December 2023
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4p8w]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4P8W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4P8W FirstGlance]. <br>		<table><tr><td colspan='2'>[[4p8w]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4P8W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4P8W FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.87Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4p8w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4p8w OCA], [https://pdbe.org/4p8w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4p8w RCSB], [https://www.ebi.ac.uk/pdbsum/4p8w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4p8w ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4p8w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4p8w OCA], [https://pdbe.org/4p8w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4p8w RCSB], [https://www.ebi.ac.uk/pdbsum/4p8w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4p8w ProSAT]</span></td></tr>
	</table>		</table>

OCA at 12:47, 1 February 2023

OCA — Wed, 01 Feb 2023 12:47:35 GMT

←Older revision		Revision as of 12:47, 1 February 2023
Line 3:		Line 3:
	<StructureSection load='4p8w' size='340' side='right'caption='[[4p8w]], [[Resolution\|resolution]] 1.87Å' scene=''>		<StructureSection load='4p8w' size='340' side='right'caption='[[4p8w]], [[Resolution\|resolution]] 1.87Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4p8w]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Human Human~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4P8W OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4P8W FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4p8w]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4P8W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4P8W FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>~~</td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	~~<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4p8x\|4p8x]], [[4p8u\|4p8u]]</td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4p8w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4p8w OCA], [https://pdbe.org/4p8w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4p8w RCSB], [https://www.ebi.ac.uk/pdbsum/4p8w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4p8w ProSAT]</span></td></tr>
-	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">CHI3L2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])~~</td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4p8w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4p8w OCA], [~~http~~://pdbe.org/4p8w PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4p8w RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4p8w PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4p8w ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/CH3L2_HUMAN CH3L2_HUMAN]] Lectin that binds chitooligosaccharides and other glycans with high affinity, but not heparin. Has no chitinase activity.<ref>PMID:22742450</ref>	+	[https://www.uniprot.org/uniprot/CH3L2_HUMAN CH3L2_HUMAN] Lectin that binds chitooligosaccharides and other glycans with high affinity, but not heparin. Has no chitinase activity.<ref>PMID:22742450</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 22:		Line 20:

	==See Also==		==See Also==
-	*[[Chitinase-3-like protein\|Chitinase-3-like protein]]	+	*[[Chitinase-3-like protein 3D structures\|Chitinase-3-like protein 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Human~~]]	+	[[Category: Homo sapiens]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Ranok, A]]	+	[[Category: Ranok A]]
-	[[Category: Robinson~~, R C~~]]	+	[[Category: Robinson RC]]
-	[[Category: Suginta, W]]	+	[[Category: Suginta W]]
-	[[Category: Wongsantichon, J]]	+	[[Category: Wongsantichon J]]
-	~~[[Category: Chitinase 3-like protein 2]]~~	+
-	~~[[Category: Family-18 chitinase]]~~	+
-	~~[[Category: Human ykl-39]]~~	+
-	~~[[Category: Sugar binding protein~~]]	+

OCA at 07:50, 17 April 2019

OCA — Wed, 17 Apr 2019 07:50:16 GMT

←Older revision		Revision as of 07:50, 17 April 2019
Line 1:		Line 1:

	==The crystal structures of YKL-39 in the presence of chitooligosaccharides (GlcNAc4) were solved to resolutions of 1.9 angstrom==		==The crystal structures of YKL-39 in the presence of chitooligosaccharides (GlcNAc4) were solved to resolutions of 1.9 angstrom==
-	<StructureSection load='4p8w' size='340' side='right' caption='[[4p8w]], [[Resolution\|resolution]] 1.87Å' scene=''>	+	<StructureSection load='4p8w' size='340' side='right'caption='[[4p8w]], [[Resolution\|resolution]] 1.87Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4p8w]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4P8W OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4P8W FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4p8w]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4P8W OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4P8W FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat">~~<scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>,~~ <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4p8x\|4p8x]], [[4p8u\|4p8u]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4p8x\|4p8x]], [[4p8u\|4p8u]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">CHI3L2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4p8w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4p8w OCA], [http://pdbe.org/4p8w PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4p8w RCSB], [http://www.ebi.ac.uk/pdbsum/4p8w PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4p8w ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4p8w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4p8w OCA], [http://pdbe.org/4p8w PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4p8w RCSB], [http://www.ebi.ac.uk/pdbsum/4p8w PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4p8w ProSAT]</span></td></tr>
	</table>		</table>
Line 19:		Line 20:
	</div>		</div>
	<div class="pdbe-citations 4p8w" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 4p8w" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Chitinase-3-like protein\|Chitinase-3-like protein]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Human]]
		+	[[Category: Large Structures]]
	[[Category: Ranok, A]]		[[Category: Ranok, A]]
	[[Category: Robinson, R C]]		[[Category: Robinson, R C]]
Line 30:		Line 36:
	[[Category: Family-18 chitinase]]		[[Category: Family-18 chitinase]]
	[[Category: Human ykl-39]]		[[Category: Human ykl-39]]
		+	[[Category: Sugar binding protein]]

OCA at 17:00, 4 January 2017

OCA — Wed, 04 Jan 2017 17:00:06 GMT

←Older revision		Revision as of 17:00, 4 January 2017
Line 1:		Line 1:
		+
	==The crystal structures of YKL-39 in the presence of chitooligosaccharides (GlcNAc4) were solved to resolutions of 1.9 angstrom==		==The crystal structures of YKL-39 in the presence of chitooligosaccharides (GlcNAc4) were solved to resolutions of 1.9 angstrom==
	<StructureSection load='4p8w' size='340' side='right' caption='[[4p8w]], [[Resolution\|resolution]] 1.87Å' scene=''>		<StructureSection load='4p8w' size='340' side='right' caption='[[4p8w]], [[Resolution\|resolution]] 1.87Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4p8x\|4p8x]], [[4p8u\|4p8u]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4p8x\|4p8x]], [[4p8u\|4p8u]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4p8w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4p8w OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4p8w RCSB], [http://www.ebi.ac.uk/pdbsum/4p8w PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4p8w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4p8w OCA], [http://pdbe.org/4p8w PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4p8w RCSB], [http://www.ebi.ac.uk/pdbsum/4p8w PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4p8w ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 17:		Line 18:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 4p8w" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 21:35, 25 December 2014

OCA — Thu, 25 Dec 2014 21:35:58 GMT

←Older revision		Revision as of 21:35, 25 December 2014
Line 7:		Line 7:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4p8w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4p8w OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4p8w RCSB], [http://www.ebi.ac.uk/pdbsum/4p8w PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4p8w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4p8w OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4p8w RCSB], [http://www.ebi.ac.uk/pdbsum/4p8w PDBsum]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/CH3L2_HUMAN CH3L2_HUMAN]] Lectin that binds chitooligosaccharides and other glycans with high affinity, but not heparin. Has no chitinase activity.<ref>PMID:22742450</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==

OCA at 08:33, 17 December 2014

OCA — Wed, 17 Dec 2014 08:33:01 GMT

←Older revision		Revision as of 08:33, 17 December 2014
Line 7:		Line 7:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4p8w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4p8w OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4p8w RCSB], [http://www.ebi.ac.uk/pdbsum/4p8w PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4p8w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4p8w OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4p8w RCSB], [http://www.ebi.ac.uk/pdbsum/4p8w PDBsum]</span></td></tr>
	</table>		</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Four crystal structures of human YKL-39 were solved in the absence and presence of chitooligosaccharides. The structure of YKL-39 comprises a major (beta/alpha)8 TIM barrel domain and a small alpha+beta insertion domain. Structural analysis demonstrates that YKL-39 interacts with chitooligosaccharides through hydrogen bonds and hydrophobic interactions. The binding of chitin fragments induces local conformational changes that facilitate tight binding. Compared with other GH-18 members, YKL-39 has the least extended chitin-binding cleft, containing five subsites for sugars, namely (-3)(-2)(-1)(+1)(+2), with Trp360 playing a prominent role in the sugar-protein interactions at the centre of the chitin-binding cleft. Evaluation of binding affinities obtained from isothermal titration calorimetry and intrinsic fluorescence spectroscopy suggests that YKL-39 binds to chitooligosaccharides with Kd values in the micromolar concentration range and that the binding energies increase with the chain length. There were no significant differences between the Kd values of chitopentaose and chitohexaose, supporting the structural evidence for the five-binding subsite topology. Thermodynamic analysis indicates that binding of chitooligosaccharide to YKL-39 is mainly driven by enthalpy.
		+
		+	Structural and thermodynamic insights into chitooligosaccharide binding to human cartilage chitinase 3-like protein 2 (CHI3L2 or YKL-39).,Ranok A, Wongsantichon J, Robinson RC, Suginta W J Biol Chem. 2014 Dec 4. pii: jbc.M114.588905. PMID:25477513<ref>PMID:25477513</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 09:41, 3 December 2014

OCA — Wed, 03 Dec 2014 09:41:14 GMT

←Older revision		Revision as of 09:41, 3 December 2014
Line 1:		Line 1:
-	'''~~Unreleased structure~~'''	+	==The crystal structures of YKL-39 in the presence of chitooligosaccharides (GlcNAc4) were solved to resolutions of 1.9 angstrom==
-		+	<StructureSection load='4p8w' size='340' side='right' caption='[[4p8w]], [[Resolution\|resolution]] 1.87Å' scene=''>
-	~~The entry~~ 4p8w is ~~ON HOLD until Paper Publication~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[4p8w]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4P8W OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4P8W FirstGlance]. <br>
-	~~Authors~~: ~~Suginta~~, W., ~~Ranok~~, A., Robinson, R.C., Wongsantichon, J.	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene></td></tr>
-		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4p8x\|4p8x]], [[4p8u\|4p8u]]</td></tr>
-	~~Description~~: ~~The crystal structures of YKL~~-39 ~~in the presence of chitooligosaccharides (GlcNAc4) were solved to resolutions of 1.9 angstrom~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4p8w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4p8w OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4p8w RCSB], [http://www.ebi.ac.uk/pdbsum/4p8w PDBsum]</span></td></tr>
		+	</table>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Ranok, A]]
		+	[[Category: Robinson, R C]]
		+	[[Category: Suginta, W]]
		+	[[Category: Wongsantichon, J]]
		+	[[Category: Chitinase 3-like protein 2]]
		+	[[Category: Family-18 chitinase]]
		+	[[Category: Human ykl-39]]

OCA at 00:54, 7 August 2014

OCA — Thu, 07 Aug 2014 00:54:20 GMT

←Older revision		Revision as of 00:54, 7 August 2014
Line 3:		Line 3:
	The entry 4p8w is ON HOLD until Paper Publication		The entry 4p8w is ON HOLD until Paper Publication

-	Authors: Suginta W., Ranok A., Robinson R.C., Wongsantichon J.	+	Authors: Suginta, W., Ranok, A., Robinson, R.C., Wongsantichon, J.

	Description: The crystal structures of YKL-39 in the presence of chitooligosaccharides (GlcNAc4) were solved to resolutions of 1.9 angstrom		Description: The crystal structures of YKL-39 in the presence of chitooligosaccharides (GlcNAc4) were solved to resolutions of 1.9 angstrom

OCA at 08:00, 21 May 2014

OCA — Wed, 21 May 2014 08:00:10 GMT

←Older revision		Revision as of 08:00, 21 May 2014
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4p8w is ON HOLD	+	The entry 4p8w is ON HOLD until Paper Publication

	Authors: Suginta W., Ranok A., Robinson R.C., Wongsantichon J.		Authors: Suginta W., Ranok A., Robinson R.C., Wongsantichon J.

-	Description: ~~The insight binding of chitooligosaccharides to YKL-39 was determined using crystallography.~~ The crystal structures of YKL-39 in the ~~absence and~~ presence of chitooligosaccharides (~~GlcNAc2-6~~) were solved to resolutions of 1.~~53-2.48 ?.~~	+	Description: The crystal structures of YKL-39 in the presence of chitooligosaccharides (GlcNAc4) were solved to resolutions of 1.9 angstrom

OCA: Protected "4p8w" [edit=sysop:move=sysop]

OCA — Wed, 09 Apr 2014 05:54:23 GMT

Protected "4p8w" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:54, 9 April 2014