4pgp - Revision history

OCA at 00:43, 28 December 2023

OCA — Thu, 28 Dec 2023 00:43:36 GMT

←Older revision		Revision as of 00:43, 28 December 2023
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4pgp]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Oleidesulfovibrio_alaskensis_G20 Oleidesulfovibrio alaskensis G20]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PGP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4PGP FirstGlance]. <br>		<table><tr><td colspan='2'>[[4pgp]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Oleidesulfovibrio_alaskensis_G20 Oleidesulfovibrio alaskensis G20]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PGP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4PGP FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=IAC:1H-INDOL-3-YLACETIC+ACID'>IAC</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.25Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=IAC:1H-INDOL-3-YLACETIC+ACID'>IAC</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4pgp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pgp OCA], [https://pdbe.org/4pgp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4pgp RCSB], [https://www.ebi.ac.uk/pdbsum/4pgp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4pgp ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4pgp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pgp OCA], [https://pdbe.org/4pgp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4pgp RCSB], [https://www.ebi.ac.uk/pdbsum/4pgp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4pgp ProSAT]</span></td></tr>
	</table>		</table>

OCA at 13:01, 1 February 2023

OCA — Wed, 01 Feb 2023 13:01:22 GMT

←Older revision		Revision as of 13:01, 1 February 2023
Line 3:		Line 3:
	<StructureSection load='4pgp' size='340' side='right'caption='[[4pgp]], [[Resolution\|resolution]] 2.25Å' scene=''>		<StructureSection load='4pgp' size='340' side='right'caption='[[4pgp]], [[Resolution\|resolution]] 2.25Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4pgp]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Desag Desag~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PGP OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4PGP FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4pgp]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Oleidesulfovibrio_alaskensis_G20 Oleidesulfovibrio alaskensis G20]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PGP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4PGP FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=IAC:1H-INDOL-3-YLACETIC+ACID'>IAC</scene>~~</td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=IAC:1H-INDOL-3-YLACETIC+ACID'>IAC</scene></td></tr>
-	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Dde_0634 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=207559 DESAG])~~</td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4pgp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pgp OCA], [https://pdbe.org/4pgp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4pgp RCSB], [https://www.ebi.ac.uk/pdbsum/4pgp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4pgp ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4pgp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pgp OCA], [~~http~~://pdbe.org/4pgp PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4pgp RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4pgp PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4pgp ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/DCTP2_OLEA2 DCTP2_OLEA2] Solute-binding protein that binds indole-3-pyruvate and indole-3-acetate (in vitro). Can also bind D-tryptophan (in vitro), but that is probably not a physiological ligand (PubMed:25540822). Probably part of a tripartite ATP-independent periplasmic (TRAP) transport system that mediates solute transport into the cytoplasm.<ref>PMID:25540822</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 21:		Line 22:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Desag]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Almo, S C~~]]	+	[[Category: Oleidesulfovibrio alaskensis G20]]
-	[[Category: ~~Attonito, J D~~]]	+	[[Category: Al Obaidi NF]]
-	[[Category: ~~Chowdhury, S~~]]	+	[[Category: Almo SC]]
-	[[Category: ~~EFI, Enzyme Function Initiative~~]]	+	[[Category: Attonito JD]]
-	[[Category: ~~Evans, B~~]]	+	[[Category: Chowdhury S]]
-	[[Category: ~~Gerlt, J A~~]]	+	[[Category: Evans B]]
-	[[Category: ~~Glenn, A Scott~~]]	+	[[Category: Gerlt JA]]
-	[[Category: Hillerich, B]]	+	[[Category: Hillerich B]]
-	[[Category: Love, J]]	+	[[Category: Love J]]
-	[[Category: Morisco~~, L L~~]]	+	[[Category: Morisco LL]]
-	[[Category: ~~Obaidi, N F.Al~~]]	+	[[Category: Scott Glenn A]]
-	[[Category: Seidel~~, R D~~]]	+	[[Category: Seidel RD]]
-	[[Category: Stead, M]]	+	[[Category: Stead M]]
-	[[Category: Vetting~~, M W~~]]	+	[[Category: Vetting MW]]
-	[[Category: Wasserman~~, S R~~]]	+	[[Category: Wasserman SR]]
-	[[Category: Whalen~~, K L]]~~	+	[[Category: Whalen KL]]
-	~~[[Category: Efi]]~~	+
-	~~[[Category: Enzyme function initiative]]~~	+
-	~~[[Category: Solute-binding protein]]~~	+
-	~~[[Category: Structural genomic]]~~	+
-	~~[[Category: Trap periplasmic solute binding family~~]]	+

OCA at 10:12, 25 December 2019

OCA — Wed, 25 Dec 2019 10:12:55 GMT

←Older revision		Revision as of 10:12, 25 December 2019
Line 1:		Line 1:

	==CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM DESULFOVIBRIO ALASKENSIS G20 (Dde_0634, TARGET EFI-510120) WITH BOUND 3-INDOLE ACETIC ACID==		==CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM DESULFOVIBRIO ALASKENSIS G20 (Dde_0634, TARGET EFI-510120) WITH BOUND 3-INDOLE ACETIC ACID==
-	<StructureSection load='4pgp' size='340' side='right' caption='[[4pgp]], [[Resolution\|resolution]] 2.25Å' scene=''>	+	<StructureSection load='4pgp' size='340' side='right'caption='[[4pgp]], [[Resolution\|resolution]] 2.25Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4pgp]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Desag Desag]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PGP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4PGP FirstGlance]. <br>		<table><tr><td colspan='2'>[[4pgp]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Desag Desag]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PGP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4PGP FirstGlance]. <br>
Line 22:		Line 22:
	</StructureSection>		</StructureSection>
	[[Category: Desag]]		[[Category: Desag]]
		+	[[Category: Large Structures]]
	[[Category: Almo, S C]]		[[Category: Almo, S C]]
	[[Category: Attonito, J D]]		[[Category: Attonito, J D]]

OCA at 12:00, 6 November 2017

OCA — Mon, 06 Nov 2017 12:00:29 GMT

←Older revision		Revision as of 12:00, 6 November 2017
Line 3:		Line 3:
	<StructureSection load='4pgp' size='340' side='right' caption='[[4pgp]], [[Resolution\|resolution]] 2.25Å' scene=''>		<StructureSection load='4pgp' size='340' side='right' caption='[[4pgp]], [[Resolution\|resolution]] 2.25Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4pgp]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PGP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4PGP FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4pgp]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Desag Desag]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PGP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4PGP FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=IAC:1H-INDOL-3-YLACETIC+ACID'>IAC</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=IAC:1H-INDOL-3-YLACETIC+ACID'>IAC</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Dde_0634 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=207559 DESAG])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4pgp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pgp OCA], [http://pdbe.org/4pgp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4pgp RCSB], [http://www.ebi.ac.uk/pdbsum/4pgp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4pgp ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4pgp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pgp OCA], [http://pdbe.org/4pgp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4pgp RCSB], [http://www.ebi.ac.uk/pdbsum/4pgp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4pgp ProSAT]</span></td></tr>
	</table>		</table>
Line 20:		Line 21:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Desag]]
	[[Category: Almo, S C]]		[[Category: Almo, S C]]
	[[Category: Attonito, J D]]		[[Category: Attonito, J D]]
Line 38:		Line 40:
	[[Category: Efi]]		[[Category: Efi]]
	[[Category: Enzyme function initiative]]		[[Category: Enzyme function initiative]]
		+	[[Category: Solute-binding protein]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Trap periplasmic solute binding family]]		[[Category: Trap periplasmic solute binding family]]

OCA at 17:01, 4 January 2017

OCA — Wed, 04 Jan 2017 17:01:30 GMT

←Older revision		Revision as of 17:01, 4 January 2017
Line 1:		Line 1:
		+
	==CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM DESULFOVIBRIO ALASKENSIS G20 (Dde_0634, TARGET EFI-510120) WITH BOUND 3-INDOLE ACETIC ACID==		==CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM DESULFOVIBRIO ALASKENSIS G20 (Dde_0634, TARGET EFI-510120) WITH BOUND 3-INDOLE ACETIC ACID==
	<StructureSection load='4pgp' size='340' side='right' caption='[[4pgp]], [[Resolution\|resolution]] 2.25Å' scene=''>		<StructureSection load='4pgp' size='340' side='right' caption='[[4pgp]], [[Resolution\|resolution]] 2.25Å' scene=''>
Line 4:		Line 5:
	<table><tr><td colspan='2'>[[4pgp]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PGP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4PGP FirstGlance]. <br>		<table><tr><td colspan='2'>[[4pgp]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PGP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4PGP FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=IAC:1H-INDOL-3-YLACETIC+ACID'>IAC</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=IAC:1H-INDOL-3-YLACETIC+ACID'>IAC</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4pgp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pgp OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4pgp RCSB], [http://www.ebi.ac.uk/pdbsum/4pgp PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4pgp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pgp OCA], [http://pdbe.org/4pgp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4pgp RCSB], [http://www.ebi.ac.uk/pdbsum/4pgp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4pgp ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 14:		Line 15:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 4pgp" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 07:50, 25 February 2015

OCA — Wed, 25 Feb 2015 07:50:07 GMT

←Older revision		Revision as of 07:50, 25 February 2015
Line 6:		Line 6:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4pgp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pgp OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4pgp RCSB], [http://www.ebi.ac.uk/pdbsum/4pgp PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4pgp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pgp OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4pgp RCSB], [http://www.ebi.ac.uk/pdbsum/4pgp PDBsum]</span></td></tr>
	</table>		</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The rate at which genome sequencing data is accruing demands enhanced methods for functional annotation and metabolism discovery. Solute binding proteins (SBPs) facilitate the transport of the first reactant in a metabolic pathway, thereby constraining the regions of chemical space and the chemistries that must be considered for pathway reconstruction. We describe high-throughput protein production and differential scanning fluorimetry platforms, which enabled the screening of 158 SBPs against a 189 component library specifically tailored for this class of proteins. Like all screening efforts, this approach is limited by the practical constraints imposed by construction of the library, i.e., we can study only those metabolites that are known to exist and which can be made in sufficient quantities for experimentation. To move beyond these inherent limitations, we illustrate the promise of crystallographic- and mass spectrometric-based approaches for the unbiased use of entire metabolomes as screening libraries. Together, our approaches identified 40 new SBP ligands, generated experiment-based annotations for 2084 SBPs in 71 isofunctional clusters, and defined numerous metabolic pathways, including novel catabolic pathways for the utilization of ethanolamine as sole nitrogen source and the use of d-Ala-d-Ala as sole carbon source. These efforts begin to define an integrated strategy for realizing the full value of amassing genome sequence data.
		+
		+	Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes.,Vetting MW, Al-Obaidi N, Zhao S, San Francisco B, Kim J, Wichelecki DJ, Bouvier JT, Solbiati JO, Vu H, Zhang X, Rodionov DA, Love JD, Hillerich BS, Seidel RD, Quinn RJ, Osterman AL, Cronan JE, Jacobson MP, Gerlt JA, Almo SC Biochemistry. 2015 Jan 27;54(3):909-31. doi: 10.1021/bi501388y. Epub 2015 Jan 16. PMID:25540822<ref>PMID:25540822</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 09:12, 5 January 2015

OCA — Mon, 05 Jan 2015 09:12:43 GMT

←Older revision		Revision as of 09:12, 5 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4pgp]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PGP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4PGP FirstGlance]. <br>		<table><tr><td colspan='2'>[[4pgp]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PGP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4PGP FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=IAC:1H-INDOL-3-YLACETIC+ACID'>IAC</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=IAC:1H-INDOL-3-YLACETIC+ACID'>IAC</scene></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4pgp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pgp OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4pgp RCSB], [http://www.ebi.ac.uk/pdbsum/4pgp PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4pgp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pgp OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4pgp RCSB], [http://www.ebi.ac.uk/pdbsum/4pgp PDBsum]</span></td></tr>
-	<table>	+	</table>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Almo, S C.]]	+	[[Category: Almo, S C]]
-	[[Category: Attonito, J D.]]	+	[[Category: Attonito, J D]]
-	[[Category: Chowdhury, S.]]	+	[[Category: Chowdhury, S]]
-	[[Category: EFI, Enzyme Function Initiative.]]	+	[[Category: EFI, Enzyme Function Initiative]]
-	[[Category: Evans, B.]]	+	[[Category: Evans, B]]
-	[[Category: Gerlt, J A.]]	+	[[Category: Gerlt, J A]]
-	[[Category: Glenn, A Scott.]]	+	[[Category: Glenn, A Scott]]
-	[[Category: Hillerich, B.]]	+	[[Category: Hillerich, B]]
-	[[Category: Love, J.]]	+	[[Category: Love, J]]
-	[[Category: Morisco, L L.]]	+	[[Category: Morisco, L L]]
-	[[Category: Obaidi, N F.Al.]]	+	[[Category: Obaidi, N F.Al]]
-	[[Category: Seidel, R D.]]	+	[[Category: Seidel, R D]]
-	[[Category: Stead, M.]]	+	[[Category: Stead, M]]
-	[[Category: Vetting, M W.]]	+	[[Category: Vetting, M W]]
-	[[Category: Wasserman, S R.]]	+	[[Category: Wasserman, S R]]
-	[[Category: Whalen, K L.]]	+	[[Category: Whalen, K L]]
	[[Category: Efi]]		[[Category: Efi]]
	[[Category: Enzyme function initiative]]		[[Category: Enzyme function initiative]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Trap periplasmic solute binding family]]		[[Category: Trap periplasmic solute binding family]]

OCA at 08:19, 18 June 2014

OCA — Wed, 18 Jun 2014 08:19:20 GMT

←Older revision		Revision as of 08:19, 18 June 2014
Line 1:		Line 1:
-	'''~~Unreleased structure~~'''	+	==CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM DESULFOVIBRIO ALASKENSIS G20 (Dde_0634, TARGET EFI-510120) WITH BOUND 3-INDOLE ACETIC ACID==
-		+	<StructureSection load='4pgp' size='340' side='right' caption='[[4pgp]], [[Resolution\|resolution]] 2.25Å' scene=''>
-	~~The entry~~ 4pgp is ~~ON HOLD~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[4pgp]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PGP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4PGP FirstGlance]. <br>
-	~~Authors~~: ~~Vetting, M~~.W., ~~Al Obaidi~~, N.F., ~~Morisco, L~~.L., ~~Wasserman, S~~.R., ~~Stead, M~~., Attonito, J.D.~~, Scott Glenn, A.,~~ Chowdhury, S., Evans, B., Hillerich, B., Love, J., Seidel, R.D., ~~Whalen, K.L~~., ~~Gerlt, J.A~~.~~, Almo~~, S.C., Enzyme ~~Function Initiative (EFI)~~	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=IAC:1H-INDOL-3-YLACETIC+ACID'>IAC</scene><br>
-		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4pgp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pgp OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4pgp RCSB], [http://www.ebi.ac.uk/pdbsum/4pgp PDBsum]</span></td></tr>
-	~~Description~~: ~~CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM DESULFOVIBRIO ALASKENSIS G20 (Dde_0634, TARGET EFI-510120) WITH BOUND 3-INDOLE ACETIC ACID~~	+	<table>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Almo, S C.]]
		+	[[Category: Attonito, J D.]]
		+	[[Category: Chowdhury, S.]]
		+	[[Category: EFI, Enzyme Function Initiative.]]
		+	[[Category: Evans, B.]]
		+	[[Category: Gerlt, J A.]]
		+	[[Category: Glenn, A Scott.]]
		+	[[Category: Hillerich, B.]]
		+	[[Category: Love, J.]]
		+	[[Category: Morisco, L L.]]
		+	[[Category: Obaidi, N F.Al.]]
		+	[[Category: Seidel, R D.]]
		+	[[Category: Stead, M.]]
		+	[[Category: Vetting, M W.]]
		+	[[Category: Wasserman, S R.]]
		+	[[Category: Whalen, K L.]]
		+	[[Category: Efi]]
		+	[[Category: Enzyme function initiative]]
		+	[[Category: Structural genomic]]
		+	[[Category: Trap periplasmic solute binding family]]

OCA: Protected "4pgp" [edit=sysop:move=sysop]

OCA — Wed, 14 May 2014 07:07:53 GMT

Protected "4pgp" [edit=sysop:move=sysop]

←Older revision

Revision as of 07:07, 14 May 2014

OCA: New page: '''Unreleased structure''' The entry 4pgp is ON HOLD Authors: Vetting, M.W., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Stead, M., Attonito, J.D., Scott Glenn, A., Chowdhury, S., ...

OCA — Wed, 14 May 2014 07:07:52 GMT

New page: '''Unreleased structure''' The entry 4pgp is ON HOLD Authors: Vetting, M.W., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Stead, M., Attonito, J.D., Scott Glenn, A., Chowdhury, S., ...

New page

'''Unreleased structure'''

The entry 4pgp is ON HOLD

Authors: Vetting, M.W., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Stead, M., Attonito, J.D., Scott Glenn, A., Chowdhury, S., Evans, B., Hillerich, B., Love, J., Seidel, R.D., Whalen, K.L., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)

Description: CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM DESULFOVIBRIO ALASKENSIS G20 (Dde_0634, TARGET EFI-510120) WITH BOUND 3-INDOLE ACETIC ACID