4pzk - Revision history

OCA at 17:24, 20 September 2023

OCA — Wed, 20 Sep 2023 17:24:57 GMT

←Older revision		Revision as of 17:24, 20 September 2023
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4pzk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_anthracis_str._'Ames_Ancestor' Bacillus anthracis str. 'Ames Ancestor']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PZK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4PZK FirstGlance]. <br>		<table><tr><td colspan='2'>[[4pzk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_anthracis_str._'Ames_Ancestor' Bacillus anthracis str. 'Ames Ancestor']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PZK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4PZK FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.5Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4pzk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pzk OCA], [https://pdbe.org/4pzk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4pzk RCSB], [https://www.ebi.ac.uk/pdbsum/4pzk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4pzk ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4pzk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pzk OCA], [https://pdbe.org/4pzk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4pzk RCSB], [https://www.ebi.ac.uk/pdbsum/4pzk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4pzk ProSAT]</span></td></tr>
	</table>		</table>

OCA at 07:38, 8 February 2023

OCA — Wed, 08 Feb 2023 07:38:29 GMT

←Older revision		Revision as of 07:38, 8 February 2023
Line 1:		Line 1:

	==Crystal strucrure of putative RNA methyltransferase from Bacillus anthracis.==		==Crystal strucrure of putative RNA methyltransferase from Bacillus anthracis.==
-	<StructureSection load='4pzk' size='340' side='right' caption='[[4pzk]], [[Resolution\|resolution]] 1.50Å' scene=''>	+	<StructureSection load='4pzk' size='340' side='right'caption='[[4pzk]], [[Resolution\|resolution]] 1.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4pzk]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Bacillus_anthracis_ames_"ancestor"~~ Bacillus anthracis ~~ames "ancestor"~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PZK OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4PZK FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4pzk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_anthracis_str._'Ames_Ancestor' Bacillus anthracis str. 'Ames Ancestor']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PZK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4PZK FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene~~></td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BAS0516, BA_0547, cspR, GBAA_0547 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=261594 Bacillus anthracis Ames "Ancestor"])</td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4pzk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pzk OCA], [https://pdbe.org/4pzk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4pzk RCSB], [https://www.ebi.ac.uk/pdbsum/4pzk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4pzk ProSAT]</span></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/tRNA_(cytidine(34)-2'-O)-methyltransferase tRNA (cytidine(34)-2'-O)-methyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.1.207 2.1.1.207] </span></td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4pzk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pzk OCA], [~~http~~://pdbe.org/4pzk PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4pzk RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4pzk PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4pzk ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/~~Q81YT5_BACAN Q81YT5_BACAN]~~] Could methylate the ribose at the nucleotide 34 wobble position in tRNA ~~(By similarity)~~.[HAMAP-Rule:MF_01885]	+	[https://www.uniprot.org/uniprot/A0A6L7HQJ3_BACAN A0A6L7HQJ3_BACAN] Could methylate the ribose at the nucleotide 34 wobble position in tRNA.[HAMAP-Rule:MF_01885]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Bacillus anthracis ~~ames ancestor~~]]	+	[[Category: Bacillus anthracis str. 'Ames Ancestor']]
-	[[Category: ~~Anderson, W F~~]]	+	[[Category: Large Structures]]
-	[[Category: ~~Structural genomic~~]]	+	[[Category: Anderson WF]]
-	[[Category: Joachimiak, A]]	+	[[Category: Joachimiak A]]
-	[[Category: Kim, Y]]	+	[[Category: Kim Y]]
-	[[Category: Maltseva, N]]	+	[[Category: Maltseva N]]
-	[[Category: Shatsman, S]]	+	[[Category: Shatsman S]]
-	~~[[Category: Alpha-beta-alpha sandwich]]~~	+
-	~~[[Category: Csgid]]~~	+
-	~~[[Category: Methyltransferase]]~~	+
-	~~[[Category: National institute of allergy and infectious disease]]~~	+
-	~~[[Category: Niaid]]~~	+
-	~~[[Category: Transferase~~]]	+

OCA at 20:14, 4 August 2016

OCA — Thu, 04 Aug 2016 20:14:12 GMT

←Older revision		Revision as of 20:14, 4 August 2016
Line 1:		Line 1:
		+
	==Crystal strucrure of putative RNA methyltransferase from Bacillus anthracis.==		==Crystal strucrure of putative RNA methyltransferase from Bacillus anthracis.==
	<StructureSection load='4pzk' size='340' side='right' caption='[[4pzk]], [[Resolution\|resolution]] 1.50Å' scene=''>		<StructureSection load='4pzk' size='340' side='right' caption='[[4pzk]], [[Resolution\|resolution]] 1.50Å' scene=''>
Line 6:		Line 7:
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BAS0516, BA_0547, cspR, GBAA_0547 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=261594 Bacillus anthracis Ames "Ancestor"])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BAS0516, BA_0547, cspR, GBAA_0547 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=261594 Bacillus anthracis Ames "Ancestor"])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/tRNA_(cytidine(34)-2'-O)-methyltransferase tRNA (cytidine(34)-2'-O)-methyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.1.207 2.1.1.207] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/tRNA_(cytidine(34)-2'-O)-methyltransferase tRNA (cytidine(34)-2'-O)-methyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.1.207 2.1.1.207] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4pzk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pzk OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4pzk RCSB], [http://www.ebi.ac.uk/pdbsum/4pzk PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4pzk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pzk OCA], [http://pdbe.org/4pzk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4pzk RCSB], [http://www.ebi.ac.uk/pdbsum/4pzk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4pzk ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==

OCA at 19:11, 24 December 2014

OCA — Wed, 24 Dec 2014 19:11:57 GMT

←Older revision		Revision as of 19:11, 24 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_4pzk\| PDB=4pzk \| SCENE= }}~~	+	==Crystal strucrure of putative RNA methyltransferase from Bacillus anthracis.==
-	===Crystal strucrure of putative RNA methyltransferase from Bacillus anthracis.===	+	<StructureSection load='4pzk' size='340' side='right' caption='[[4pzk]], [[Resolution\|resolution]] 1.50Å' scene=''>
-		+	== Structural highlights ==
-	==Function==	+	<table><tr><td colspan='2'>[[4pzk]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_anthracis_ames_"ancestor" Bacillus anthracis ames "ancestor"]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PZK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4PZK FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BAS0516, BA_0547, cspR, GBAA_0547 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=261594 Bacillus anthracis Ames "Ancestor"])</td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/tRNA_(cytidine(34)-2'-O)-methyltransferase tRNA (cytidine(34)-2'-O)-methyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.1.207 2.1.1.207] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4pzk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pzk OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4pzk RCSB], [http://www.ebi.ac.uk/pdbsum/4pzk PDBsum]</span></td></tr>
		+	</table>
		+	== Function ==
	[[http://www.uniprot.org/uniprot/Q81YT5_BACAN Q81YT5_BACAN]] Could methylate the ribose at the nucleotide 34 wobble position in tRNA (By similarity).[HAMAP-Rule:MF_01885]		[[http://www.uniprot.org/uniprot/Q81YT5_BACAN Q81YT5_BACAN]] Could methylate the ribose at the nucleotide 34 wobble position in tRNA (By similarity).[HAMAP-Rule:MF_01885]
-		+	__TOC__
-	~~==About this Structure==~~	+	</StructureSection>
-	[[~~4pzk~~]] ~~is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PZK OCA].~~	+	[[Category: Bacillus anthracis ames ancestor]]
-	[[Category: Anderson, W F.]]	+	[[Category: Anderson, W F]]
-	[[Category: ~~CSGID, Center for~~ Structural ~~Genomics of Infectious Diseases.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Joachimiak, A.]]	+	[[Category: Joachimiak, A]]
-	[[Category: Kim, Y.]]	+	[[Category: Kim, Y]]
-	[[Category: Maltseva, N.]]	+	[[Category: Maltseva, N]]
-	[[Category: Shatsman, S.]]	+	[[Category: Shatsman, S]]
	[[Category: Alpha-beta-alpha sandwich]]		[[Category: Alpha-beta-alpha sandwich]]
-	[[Category: Center for structural genomics of infectious disease]]
	[[Category: Csgid]]		[[Category: Csgid]]
	[[Category: Methyltransferase]]		[[Category: Methyltransferase]]
	[[Category: National institute of allergy and infectious disease]]		[[Category: National institute of allergy and infectious disease]]
	[[Category: Niaid]]		[[Category: Niaid]]
-	[[Category: Structural genomic]]
	[[Category: Transferase]]		[[Category: Transferase]]

OCA at 10:13, 16 April 2014

OCA — Wed, 16 Apr 2014 10:13:04 GMT

←Older revision		Revision as of 10:13, 16 April 2014
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	{{STRUCTURE_4pzk\| PDB=4pzk \| SCENE= }}
		+	===Crystal strucrure of putative RNA methyltransferase from Bacillus anthracis.===

-	~~The entry 4pzk is ON HOLD~~	+	==Function==
		+	[[http://www.uniprot.org/uniprot/Q81YT5_BACAN Q81YT5_BACAN]] Could methylate the ribose at the nucleotide 34 wobble position in tRNA (By similarity).[HAMAP-Rule:MF_01885]

-	~~Authors~~: ~~Maltseva, N~~.~~, Kim, Y~~.~~, Shatsman, S~~. , Anderson, W.F., Joachimiak, A., ~~CSGID~~, Center for ~~Structural Genomics~~ of ~~Infectious Diseases (CSGID)~~	+	==About this Structure==
-		+	[[4pzk]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PZK OCA].
-	~~Description~~: ~~Crystal strucrure~~ of ~~putative RNA methyltransferase from Bacillus anthracis.~~	+	[[Category: Anderson, W F.]]
		+	[[Category: CSGID, Center for Structural Genomics of Infectious Diseases.]]
		+	[[Category: Joachimiak, A.]]
		+	[[Category: Kim, Y.]]
		+	[[Category: Maltseva, N.]]
		+	[[Category: Shatsman, S.]]
		+	[[Category: Alpha-beta-alpha sandwich]]
		+	[[Category: Center for structural genomics of infectious disease]]
		+	[[Category: Csgid]]
		+	[[Category: Methyltransferase]]
		+	[[Category: National institute of allergy and infectious disease]]
		+	[[Category: Niaid]]
		+	[[Category: Structural genomic]]
		+	[[Category: Transferase]]

OCA: Protected "4pzk" [edit=sysop:move=sysop]

OCA — Wed, 09 Apr 2014 05:59:08 GMT

Protected "4pzk" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:59, 9 April 2014

OCA: New page: '''Unreleased structure''' The entry 4pzk is ON HOLD Authors: Maltseva, N., Kim, Y., Shatsman, S. , Anderson, W.F., Joachimiak, A., CSGID, Center for Structural Genomics of Infectious D...

OCA — Wed, 09 Apr 2014 05:59:07 GMT

New page: '''Unreleased structure''' The entry 4pzk is ON HOLD Authors: Maltseva, N., Kim, Y., Shatsman, S. , Anderson, W.F., Joachimiak, A., CSGID, Center for Structural Genomics of Infectious D...

New page

'''Unreleased structure'''

The entry 4pzk is ON HOLD

Authors: Maltseva, N., Kim, Y., Shatsman, S. , Anderson, W.F., Joachimiak, A., CSGID, Center for Structural Genomics of Infectious Diseases (CSGID)

Description: Crystal strucrure of putative RNA methyltransferase from Bacillus anthracis.