4q0g - Revision history

OCA at 17:25, 20 September 2023

OCA — Wed, 20 Sep 2023 17:25:51 GMT

←Older revision		Revision as of 17:25, 20 September 2023
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4q0g]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Q0G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4Q0G FirstGlance]. <br>		<table><tr><td colspan='2'>[[4q0g]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Q0G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4Q0G FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.31Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4q0g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4q0g OCA], [https://pdbe.org/4q0g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4q0g RCSB], [https://www.ebi.ac.uk/pdbsum/4q0g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4q0g ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4q0g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4q0g OCA], [https://pdbe.org/4q0g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4q0g RCSB], [https://www.ebi.ac.uk/pdbsum/4q0g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4q0g ProSAT]</span></td></tr>
	</table>		</table>

OCA at 07:39, 8 February 2023

OCA — Wed, 08 Feb 2023 07:39:27 GMT

←Older revision		Revision as of 07:39, 8 February 2023
Line 1:		Line 1:

	==Crystal structure of beta subunit of acyl-CoA carboxylase AccD1 from Mycobacterium tuberculosis==		==Crystal structure of beta subunit of acyl-CoA carboxylase AccD1 from Mycobacterium tuberculosis==
-	<StructureSection load='4q0g' size='340' side='right' caption='[[4q0g]], [[Resolution\|resolution]] 2.31Å' scene=''>	+	<StructureSection load='4q0g' size='340' side='right'caption='[[4q0g]], [[Resolution\|resolution]] 2.31Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4q0g]] is a 3 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~"bacillus_tuberculosis"_(zopf_1883)_klein_1884 "bacillus~~ tuberculosis~~" (zopf 1883) klein 1884~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Q0G OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4Q0G FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4q0g]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Q0G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4Q0G FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene~~></td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">pccB-3, accD1, MT2577, Rv2502c ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1773 "Bacillus tuberculosis" (Zopf 1883) Klein 1884])</td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4q0g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4q0g OCA], [https://pdbe.org/4q0g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4q0g RCSB], [https://www.ebi.ac.uk/pdbsum/4q0g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4q0g ProSAT]</span></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Propionyl-CoA_carboxylase Propionyl-CoA carboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.4.1.3 6.4.1.3] </span></td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4q0g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4q0g OCA], [~~http~~://pdbe.org/4q0g PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4q0g RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4q0g PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4q0g ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/ACCD1_MYCTU ACCD1_MYCTU] Component of a biotin-dependent acyl-CoA carboxylase complex. This subunit transfers the CO2 from carboxybiotin to the CoA ester substrate (PubMed:25695631). When associated with the alpha1 subunit AccA1, is involved in branched amino-acid catabolism with methylcrotonyl coenzyme A as the substrate (PubMed:25695631). Shows residual with propionyl-CoA and acetyl-CoA (PubMed:25695631).<ref>PMID:25695631</ref>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Propionyl-CoA carboxylase~~]]	+	[[Category: Large Structures]]
-	[[Category: ~~Bie, H Y~~]]	+	[[Category: Mycobacterium tuberculosis]]
-	[[Category: ~~James, M N.G~~]]	+	[[Category: Bie HY]]
-	[[Category: ~~Structural genomic~~]]	+	[[Category: James MNG]]
-	[[Category: Yin, J]]	+	[[Category: Yin J]]
-	~~[[Category: Accd1]]~~	+
-	~~[[Category: Acyl-coa carboxylase beta subunit]]~~	+
-	~~[[Category: Crotonase folding]]~~	+
-	~~[[Category: Ligase]]~~	+
-	~~[[Category: Tbsgc~~]]	+

OCA at 12:23, 16 November 2017

OCA — Thu, 16 Nov 2017 12:23:53 GMT

←Older revision		Revision as of 12:23, 16 November 2017
Line 3:		Line 3:
	<StructureSection load='4q0g' size='340' side='right' caption='[[4q0g]], [[Resolution\|resolution]] 2.31Å' scene=''>		<StructureSection load='4q0g' size='340' side='right' caption='[[4q0g]], [[Resolution\|resolution]] 2.31Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4q0g]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Q0G OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4Q0G FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4q0g]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_tuberculosis"_(zopf_1883)_klein_1884 "bacillus tuberculosis" (zopf 1883) klein 1884]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Q0G OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4Q0G FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">pccB-3, accD1, MT2577, Rv2502c ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1773 "Bacillus tuberculosis" (Zopf 1883) Klein 1884])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Propionyl-CoA_carboxylase Propionyl-CoA carboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.4.1.3 6.4.1.3] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Propionyl-CoA_carboxylase Propionyl-CoA carboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.4.1.3 6.4.1.3] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4q0g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4q0g OCA], [http://pdbe.org/4q0g PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4q0g RCSB], [http://www.ebi.ac.uk/pdbsum/4q0g PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4q0g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4q0g OCA], [http://pdbe.org/4q0g PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4q0g RCSB], [http://www.ebi.ac.uk/pdbsum/4q0g PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4q0g ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__

OCA at 18:37, 12 May 2016

OCA — Thu, 12 May 2016 18:37:35 GMT

←Older revision		Revision as of 18:37, 12 May 2016
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry~~ 4q0g is ~~ON HOLD until Paper Publication~~	+	==Crystal structure of beta subunit of acyl-CoA carboxylase AccD1 from Mycobacterium tuberculosis==
-		+	<StructureSection load='4q0g' size='340' side='right' caption='[[4q0g]], [[Resolution\|resolution]] 2.31Å' scene=''>
-	~~Authors~~: ~~Bie~~, H.Y., ~~Yin~~, J., ~~James, M~~.N.G., ~~TB Structural Genomics Consortium (TBSGC)~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[4q0g]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Q0G OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4Q0G FirstGlance]. <br>
-	~~Description: Crystal structure of beta subunit of acyl-CoA carboxylase AccD1 from Mycobacterium tuberculosis~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Propionyl-CoA_carboxylase Propionyl-CoA carboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.4.1.3 6.4.1.3] </span></td></tr>
-	[[Category: Bie, H.Y]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4q0g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4q0g OCA], [http://pdbe.org/4q0g PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4q0g RCSB], [http://www.ebi.ac.uk/pdbsum/4q0g PDBsum]</span></td></tr>
-	[[Category: James, M.N.G]]	+	</table>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Propionyl-CoA carboxylase]]
		+	[[Category: Bie, H Y]]
		+	[[Category: James, M N.G]]
		+	[[Category: Structural genomic]]
	[[Category: Yin, J]]		[[Category: Yin, J]]
-	[[Category: ~~Tb Structural Genomics Consortium (~~Tbsgc)]]	+	[[Category: Accd1]]
		+	[[Category: Acyl-coa carboxylase beta subunit]]
		+	[[Category: Crotonase folding]]
		+	[[Category: Ligase]]
		+	[[Category: Tbsgc]]

OCA at 15:21, 24 December 2014

OCA — Wed, 24 Dec 2014 15:21:50 GMT

←Older revision		Revision as of 15:21, 24 December 2014
Line 6:		Line 6:

	Description: Crystal structure of beta subunit of acyl-CoA carboxylase AccD1 from Mycobacterium tuberculosis		Description: Crystal structure of beta subunit of acyl-CoA carboxylase AccD1 from Mycobacterium tuberculosis
		+	[[Category: Unreleased Structures]]
		+	[[Category: Bie, H.Y]]
		+	[[Category: James, M.N.G]]
		+	[[Category: Yin, J]]
		+	[[Category: Tb Structural Genomics Consortium (Tbsgc)]]

OCA at 06:37, 30 April 2014

OCA — Wed, 30 Apr 2014 06:37:53 GMT

←Older revision		Revision as of 06:37, 30 April 2014
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4q0g is ON HOLD	+	The entry 4q0g is ON HOLD until Paper Publication

	Authors: Bie, H.Y., Yin, J., James, M.N.G., TB Structural Genomics Consortium (TBSGC)		Authors: Bie, H.Y., Yin, J., James, M.N.G., TB Structural Genomics Consortium (TBSGC)

	Description: Crystal structure of beta subunit of acyl-CoA carboxylase AccD1 from Mycobacterium tuberculosis		Description: Crystal structure of beta subunit of acyl-CoA carboxylase AccD1 from Mycobacterium tuberculosis

OCA at 09:09, 16 April 2014

OCA — Wed, 16 Apr 2014 09:09:31 GMT

←Older revision		Revision as of 09:09, 16 April 2014
Line 5:		Line 5:
	Authors: Bie, H.Y., Yin, J., James, M.N.G., TB Structural Genomics Consortium (TBSGC)		Authors: Bie, H.Y., Yin, J., James, M.N.G., TB Structural Genomics Consortium (TBSGC)

-	Description: Crystal structure of subunit of acyl-CoA carboxylase AccD1 from Mycobacterium tuberculosis	+	Description: Crystal structure of beta subunit of acyl-CoA carboxylase AccD1 from Mycobacterium tuberculosis

OCA: Protected "4q0g" [edit=sysop:move=sysop]

OCA — Wed, 09 Apr 2014 06:00:07 GMT

Protected "4q0g" [edit=sysop:move=sysop]

←Older revision

Revision as of 06:00, 9 April 2014

OCA: New page: '''Unreleased structure''' The entry 4q0g is ON HOLD Authors: Bie, H.Y., Yin, J., James, M.N.G., TB Structural Genomics Consortium (TBSGC) Description: Crystal structure of subunit of ...

OCA — Wed, 09 Apr 2014 06:00:06 GMT

New page: '''Unreleased structure''' The entry 4q0g is ON HOLD Authors: Bie, H.Y., Yin, J., James, M.N.G., TB Structural Genomics Consortium (TBSGC) Description: Crystal structure of subunit of ...

New page

'''Unreleased structure'''

The entry 4q0g is ON HOLD

Authors: Bie, H.Y., Yin, J., James, M.N.G., TB Structural Genomics Consortium (TBSGC)

Description: Crystal structure of subunit of acyl-CoA carboxylase AccD1 from Mycobacterium tuberculosis