4qao - Revision history

OCA at 17:30, 20 September 2023

OCA — Wed, 20 Sep 2023 17:30:36 GMT

←Older revision		Revision as of 17:30, 20 September 2023
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4qao]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QAO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4QAO FirstGlance]. <br>		<table><tr><td colspan='2'>[[4qao]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QAO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4QAO FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.103Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4qao FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qao OCA], [https://pdbe.org/4qao PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4qao RCSB], [https://www.ebi.ac.uk/pdbsum/4qao PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4qao ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4qao FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qao OCA], [https://pdbe.org/4qao PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4qao RCSB], [https://www.ebi.ac.uk/pdbsum/4qao PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4qao ProSAT]</span></td></tr>
	</table>		</table>

OCA at 11:21, 15 February 2023

OCA — Wed, 15 Feb 2023 11:21:14 GMT

←Older revision		Revision as of 11:21, 15 February 2023
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	<StructureSection load='4qao' size='340' side='right'caption='[[4qao]], [[Resolution\|resolution]] 2.10Å' scene=''>		<StructureSection load='4qao' size='340' side='right'caption='[[4qao]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4qao]] is a 3 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Atcc_18824 Atcc 18824~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QAO OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4QAO FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4qao]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QAO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4QAO FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>~~</td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
-	~~<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4q5p\|4q5p]]</td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4qao FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qao OCA], [https://pdbe.org/4qao PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4qao RCSB], [https://www.ebi.ac.uk/pdbsum/4qao PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4qao ProSAT]</span></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">CYC1, YJR048W, J1653 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 ATCC 18824])</td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4qao FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qao OCA], [~~http~~://pdbe.org/4qao PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4qao RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4qao PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4qao ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/CYC1_YEAST CYC1_YEAST]] Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	+	[https://www.uniprot.org/uniprot/CYC1_YEAST CYC1_YEAST] Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.

	==See Also==		==See Also==
Line 16:		Line 14:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Atcc 18824]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Amacher, J F~~]]	+	[[Category: Saccharomyces cerevisiae]]
-	[[Category: ~~Madden, D R~~]]	+	[[Category: Amacher JF]]
-	[[Category: ~~Pletneva, E K~~]]	+	[[Category: Madden DR]]
-	[[Category: ~~Zhong, F~~]]	+	[[Category: Pletneva EK]]
-	[[Category: ~~Zhu, M Q~~]]	+	[[Category: Zhong F]]
-	[[Category: ~~Electron transport~~]]	+	[[Category: Zhu MQ]]

OCA at 12:14, 17 July 2019

OCA — Wed, 17 Jul 2019 12:14:38 GMT

←Older revision		Revision as of 12:14, 17 July 2019
Line 1:		Line 1:

	==Lysine-ligated cytochrome c with F82H==		==Lysine-ligated cytochrome c with F82H==
-	<StructureSection load='4qao' size='340' side='right' caption='[[4qao]], [[Resolution\|resolution]] 2.10Å' scene=''>	+	<StructureSection load='4qao' size='340' side='right'caption='[[4qao]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4qao]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_18824 Atcc 18824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QAO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4QAO FirstGlance]. <br>		<table><tr><td colspan='2'>[[4qao]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_18824 Atcc 18824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QAO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4QAO FirstGlance]. <br>
Line 11:		Line 11:
	== Function ==		== Function ==
	[[http://www.uniprot.org/uniprot/CYC1_YEAST CYC1_YEAST]] Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.		[[http://www.uniprot.org/uniprot/CYC1_YEAST CYC1_YEAST]] Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
		+
		+	==See Also==
		+	*[[Cytochrome C 3D structures\|Cytochrome C 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Atcc 18824]]		[[Category: Atcc 18824]]
		+	[[Category: Large Structures]]
	[[Category: Amacher, J F]]		[[Category: Amacher, J F]]
	[[Category: Madden, D R]]		[[Category: Madden, D R]]

OCA at 08:51, 22 November 2017

OCA — Wed, 22 Nov 2017 08:51:16 GMT

←Older revision		Revision as of 08:51, 22 November 2017
Line 3:		Line 3:
	<StructureSection load='4qao' size='340' side='right' caption='[[4qao]], [[Resolution\|resolution]] 2.10Å' scene=''>		<StructureSection load='4qao' size='340' side='right' caption='[[4qao]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4qao]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QAO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4QAO FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4qao]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_18824 Atcc 18824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QAO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4QAO FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4q5p\|4q5p]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4q5p\|4q5p]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">CYC1, YJR048W, J1653 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 ATCC 18824])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4qao FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qao OCA], [http://pdbe.org/4qao PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4qao RCSB], [http://www.ebi.ac.uk/pdbsum/4qao PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4qao ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4qao FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qao OCA], [http://pdbe.org/4qao PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4qao RCSB], [http://www.ebi.ac.uk/pdbsum/4qao PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4qao ProSAT]</span></td></tr>
	</table>		</table>
Line 12:		Line 13:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Atcc 18824]]
	[[Category: Amacher, J F]]		[[Category: Amacher, J F]]
	[[Category: Madden, D R]]		[[Category: Madden, D R]]

OCA at 13:25, 10 May 2017

OCA — Wed, 10 May 2017 13:25:11 GMT

←Older revision		Revision as of 13:25, 10 May 2017
Line 1:		Line 1:
		+
	==Lysine-ligated cytochrome c with F82H==		==Lysine-ligated cytochrome c with F82H==
	<StructureSection load='4qao' size='340' side='right' caption='[[4qao]], [[Resolution\|resolution]] 2.10Å' scene=''>		<StructureSection load='4qao' size='340' side='right' caption='[[4qao]], [[Resolution\|resolution]] 2.10Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4q5p\|4q5p]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4q5p\|4q5p]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4qao FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qao OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4qao RCSB], [http://www.ebi.ac.uk/pdbsum/4qao PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4qao FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qao OCA], [http://pdbe.org/4qao PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4qao RCSB], [http://www.ebi.ac.uk/pdbsum/4qao PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4qao ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==

OCA at 20:08, 5 August 2015

OCA — Wed, 05 Aug 2015 20:08:53 GMT

←Older revision		Revision as of 20:08, 5 August 2015
Line 1:		Line 1:
-	'''~~Unreleased structure~~'''	+	==Lysine-ligated cytochrome c with F82H==
-		+	<StructureSection load='4qao' size='340' side='right' caption='[[4qao]], [[Resolution\|resolution]] 2.10Å' scene=''>
-	~~The entry~~ 4qao is ~~ON HOLD until Aug 05 2016~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[4qao]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QAO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4QAO FirstGlance]. <br>
-	~~Authors~~: ~~Amacher, J~~.F.~~, Zhu, M~~.Q., ~~Zhong, F~~., ~~Pletneva, E~~.K., ~~Madden, D~~.R.	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
-		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4q5p\|4q5p]]</td></tr>
-	~~Description~~: ~~Lysine-ligated~~ cytochrome c ~~with F82H~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4qao FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qao OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4qao RCSB], [http://www.ebi.ac.uk/pdbsum/4qao PDBsum]</span></td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/CYC1_YEAST CYC1_YEAST]] Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Amacher, J F]]
		+	[[Category: Madden, D R]]
		+	[[Category: Pletneva, E K]]
	[[Category: Zhong, F]]		[[Category: Zhong, F]]
-	~~[[Category: Pletneva, E.K]]~~	+	[[Category: Zhu, M Q]]
-	[[Category: Zhu, M.Q]]	+	[[Category: Electron transport]]
-	[[Category: ~~Amacher, J.F]]~~	+
-	~~[[Category: Madden, D.R~~]]	+

OCA at 08:04, 15 April 2015

OCA — Wed, 15 Apr 2015 08:04:18 GMT

←Older revision		Revision as of 08:04, 15 April 2015
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4qao is ON HOLD until ~~Paper Publication~~	+	The entry 4qao is ON HOLD until Aug 05 2016

	Authors: Amacher, J.F., Zhu, M.Q., Zhong, F., Pletneva, E.K., Madden, D.R.		Authors: Amacher, J.F., Zhu, M.Q., Zhong, F., Pletneva, E.K., Madden, D.R.

OCA at 15:30, 24 December 2014

OCA — Wed, 24 Dec 2014 15:30:25 GMT

←Older revision		Revision as of 15:30, 24 December 2014
Line 6:		Line 6:

	Description: Lysine-ligated cytochrome c with F82H		Description: Lysine-ligated cytochrome c with F82H
		+	[[Category: Unreleased Structures]]
		+	[[Category: Zhong, F]]
		+	[[Category: Pletneva, E.K]]
		+	[[Category: Zhu, M.Q]]
		+	[[Category: Amacher, J.F]]
		+	[[Category: Madden, D.R]]

OCA at 08:07, 24 September 2014

OCA — Wed, 24 Sep 2014 08:07:39 GMT

←Older revision		Revision as of 08:07, 24 September 2014
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4qao is ON HOLD	+	The entry 4qao is ON HOLD until Paper Publication

	Authors: Amacher, J.F., Zhu, M.Q., Zhong, F., Pletneva, E.K., Madden, D.R.		Authors: Amacher, J.F., Zhu, M.Q., Zhong, F., Pletneva, E.K., Madden, D.R.

	Description: Lysine-ligated cytochrome c with F82H		Description: Lysine-ligated cytochrome c with F82H

OCA: Protected "4qao" [edit=sysop:move=sysop]

OCA — Wed, 14 May 2014 07:11:01 GMT

Protected "4qao" [edit=sysop:move=sysop]

←Older revision

Revision as of 07:11, 14 May 2014