4qhb - Revision history

OCA at 11:59, 1 February 2023

OCA — Wed, 01 Feb 2023 11:59:27 GMT

←Older revision		Revision as of 11:59, 1 February 2023
Line 1:		Line 1:

	==Crystal structure of a putative hydrolase (BVU_2763) from Bacteroides vulgatus ATCC 8482 at 2.44 A resolution==		==Crystal structure of a putative hydrolase (BVU_2763) from Bacteroides vulgatus ATCC 8482 at 2.44 A resolution==
-	<StructureSection load='4qhb' size='340' side='right' caption='[[4qhb]], [[Resolution\|resolution]] 2.44Å' scene=''>	+	<StructureSection load='4qhb' size='340' side='right'caption='[[4qhb]], [[Resolution\|resolution]] 2.44Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4qhb]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Bacv8 Bacv8~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QHB OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4QHB FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4qhb]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Phocaeicola_vulgatus_ATCC_8482 Phocaeicola vulgatus ATCC 8482]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QHB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4QHB FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>~~</td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	~~<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4qhb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qhb OCA], [https://pdbe.org/4qhb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4qhb RCSB], [https://www.ebi.ac.uk/pdbsum/4qhb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4qhb ProSAT]</span></td></tr>
-	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BVU_2763 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=435590 BACV8])~~</td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4qhb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qhb OCA], [~~http~~://pdbe.org/4qhb PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4qhb RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4qhb PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4qhb ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/A6L3Z9_PHOV8 A6L3Z9_PHOV8]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Bacv8~~]]	+	[[Category: Large Structures]]
-	[[Category: ~~Structural genomic]]~~	+	[[Category: Phocaeicola vulgatus ATCC 8482]]
-	~~[[Category: Hydrolase]]~~	+
-	~~[[Category: Jcsg]]~~	+
-	~~[[Category: PSI, Protein structure initiative]]~~	+
-	~~[[Category: Psi-biology]]~~	+
-	~~[[Category: Two domain protein~~]]	+

OCA at 08:53, 22 November 2017

OCA — Wed, 22 Nov 2017 08:53:33 GMT

←Older revision		Revision as of 08:53, 22 November 2017
Line 3:		Line 3:
	<StructureSection load='4qhb' size='340' side='right' caption='[[4qhb]], [[Resolution\|resolution]] 2.44Å' scene=''>		<StructureSection load='4qhb' size='340' side='right' caption='[[4qhb]], [[Resolution\|resolution]] 2.44Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4qhb]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QHB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4QHB FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4qhb]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacv8 Bacv8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QHB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4QHB FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BVU_2763 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=435590 BACV8])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4qhb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qhb OCA], [http://pdbe.org/4qhb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4qhb RCSB], [http://www.ebi.ac.uk/pdbsum/4qhb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4qhb ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4qhb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qhb OCA], [http://pdbe.org/4qhb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4qhb RCSB], [http://www.ebi.ac.uk/pdbsum/4qhb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4qhb ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Bacv8]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]

OCA at 19:17, 4 August 2016

OCA — Thu, 04 Aug 2016 19:17:49 GMT

←Older revision		Revision as of 19:17, 4 August 2016
Line 1:		Line 1:
		+
	==Crystal structure of a putative hydrolase (BVU_2763) from Bacteroides vulgatus ATCC 8482 at 2.44 A resolution==		==Crystal structure of a putative hydrolase (BVU_2763) from Bacteroides vulgatus ATCC 8482 at 2.44 A resolution==
	<StructureSection load='4qhb' size='340' side='right' caption='[[4qhb]], [[Resolution\|resolution]] 2.44Å' scene=''>		<StructureSection load='4qhb' size='340' side='right' caption='[[4qhb]], [[Resolution\|resolution]] 2.44Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4qhb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qhb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4qhb RCSB], [http://www.ebi.ac.uk/pdbsum/4qhb PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4qhb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qhb OCA], [http://pdbe.org/4qhb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4qhb RCSB], [http://www.ebi.ac.uk/pdbsum/4qhb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4qhb ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__

OCA at 11:28, 24 December 2014

OCA — Wed, 24 Dec 2014 11:28:11 GMT

←Older revision		Revision as of 11:28, 24 December 2014
Line 1:		Line 1:
-	==Crystal structure of a ~~hypothetical protein~~ (BVU_2763) from Bacteroides vulgatus ATCC 8482 at 2.44 A resolution==	+	==Crystal structure of a putative hydrolase (BVU_2763) from Bacteroides vulgatus ATCC 8482 at 2.44 A resolution==
	<StructureSection load='4qhb' size='340' side='right' caption='[[4qhb]], [[Resolution\|resolution]] 2.44Å' scene=''>		<StructureSection load='4qhb' size='340' side='right' caption='[[4qhb]], [[Resolution\|resolution]] 2.44Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4qhb]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QHB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4QHB FirstGlance]. <br>		<table><tr><td colspan='2'>[[4qhb]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QHB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4QHB FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>	+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4qhb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qhb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4qhb RCSB], [http://www.ebi.ac.uk/pdbsum/4qhb PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4qhb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qhb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4qhb RCSB], [http://www.ebi.ac.uk/pdbsum/4qhb PDBsum]</span></td></tr>
-	<table>	+	</table>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~JCSG, Joint Center for~~ Structural ~~Genomics.~~]]	+	[[Category: Structural genomic]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]
	[[Category: Jcsg]]		[[Category: Jcsg]]
-	[[Category: ~~Joint center for structural genomic]]~~	+	[[Category: PSI, Protein structure initiative]]
-	~~[[Category:~~ Protein structure initiative]]	+
	[[Category: Psi-biology]]		[[Category: Psi-biology]]
-	[[Category: Structural genomic]]
	[[Category: Two domain protein]]		[[Category: Two domain protein]]

OCA at 08:24, 18 June 2014

OCA — Wed, 18 Jun 2014 08:24:54 GMT

←Older revision		Revision as of 08:24, 18 June 2014
Line 1:		Line 1:
-	'''~~Unreleased structure~~'''	+	==Crystal structure of a hypothetical protein (BVU_2763) from Bacteroides vulgatus ATCC 8482 at 2.44 A resolution==
-		+	<StructureSection load='4qhb' size='340' side='right' caption='[[4qhb]], [[Resolution\|resolution]] 2.44Å' scene=''>
-	~~The entry~~ 4qhb is ~~ON HOLD~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[4qhb]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QHB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4QHB FirstGlance]. <br>
-	~~Authors~~: Joint Center for Structural Genomics ~~(JCSG)~~	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene><br>
-		+	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	~~Description~~: ~~Crystal~~ structure ~~of a hypothetical~~ protein ~~(BVU_2763) from Bacteroides vulgatus ATCC 8482 at 2.44 A resolution~~	+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4qhb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qhb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4qhb RCSB], [http://www.ebi.ac.uk/pdbsum/4qhb PDBsum]</span></td></tr>
		+	<table>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: JCSG, Joint Center for Structural Genomics.]]
		+	[[Category: Hydrolase]]
		+	[[Category: Jcsg]]
		+	[[Category: Joint center for structural genomic]]
		+	[[Category: Protein structure initiative]]
		+	[[Category: Psi-biology]]
		+	[[Category: Structural genomic]]
		+	[[Category: Two domain protein]]

OCA: Protected "4qhb" [edit=sysop:move=sysop]

OCA — Wed, 04 Jun 2014 04:58:52 GMT

Protected "4qhb" [edit=sysop:move=sysop]

←Older revision

Revision as of 04:58, 4 June 2014

OCA: New page: '''Unreleased structure''' The entry 4qhb is ON HOLD Authors: Joint Center for Structural Genomics (JCSG) Description: Crystal structure of a hypothetical protein (BVU_2763) from Bacte...

OCA — Wed, 04 Jun 2014 04:58:52 GMT

New page: '''Unreleased structure''' The entry 4qhb is ON HOLD Authors: Joint Center for Structural Genomics (JCSG) Description: Crystal structure of a hypothetical protein (BVU_2763) from Bacte...

New page

'''Unreleased structure'''

The entry 4qhb is ON HOLD

Authors: Joint Center for Structural Genomics (JCSG)

Description: Crystal structure of a hypothetical protein (BVU_2763) from Bacteroides vulgatus ATCC 8482 at 2.44 A resolution