4qpw - Revision history

OCA at 12:47, 1 March 2024

OCA — Fri, 01 Mar 2024 12:47:57 GMT

←Older revision		Revision as of 12:47, 1 March 2024
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4qpw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_intestinalis_DSM_17393 Bacteroides intestinalis DSM 17393]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QPW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4QPW FirstGlance]. <br>		<table><tr><td colspan='2'>[[4qpw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_intestinalis_DSM_17393 Bacteroides intestinalis DSM 17393]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QPW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4QPW FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PRD_900117:4beta-beta-xylotriose'>PRD_900117</scene>, <scene name='pdbligand=XYP:BETA-D-XYLOPYRANOSE'>XYP</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.14Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PRD_900117:4beta-beta-xylotriose'>PRD_900117</scene>, <scene name='pdbligand=XYP:BETA-D-XYLOPYRANOSE'>XYP</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4qpw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qpw OCA], [https://pdbe.org/4qpw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4qpw RCSB], [https://www.ebi.ac.uk/pdbsum/4qpw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4qpw ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4qpw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qpw OCA], [https://pdbe.org/4qpw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4qpw RCSB], [https://www.ebi.ac.uk/pdbsum/4qpw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4qpw ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[https://www.uniprot.org/uniprot/B3CET4_9BACE B3CET4_9BACE]		[https://www.uniprot.org/uniprot/B3CET4_9BACE B3CET4_9BACE]
-	<div style="background-color:#fffaf0;">
-	== Publication Abstract from PubMed ==
-	Enzymes that degrade dietary and host-derived glycans represent the most abundant functional activities encoded by genes unique to the human gut microbiome. However, the biochemical activities of a vast majority of the glycan-degrading enzymes are poorly understood. Here, we use transcriptome sequencing to understand the diversity of genes expressed by the human gut bacteria Bacteroides intestinalis and Bacteroides ovatus grown in monoculture with the abundant dietary polysaccharide xylan. The most highly induced carbohydrate active genes encode a unique glycoside hydrolase (GH) family 10 endoxylanase (BiXyn10A or BACINT_04215 and BACOVA_04390) that is highly conserved in the Bacteroidetes xylan utilization system. The BiXyn10A modular architecture consists of a GH10 catalytic module disrupted by a 250 amino acid sequence of unknown function. Biochemical analysis of BiXyn10A demonstrated that such insertion sequences encode a new family of carbohydrate-binding modules (CBMs) that binds to xylose-configured oligosaccharide/polysaccharide ligands, the substrate of the BiXyn10A enzymatic activity. The crystal structures of CBM1 from BiXyn10A (1.8 A), a cocomplex of BiXyn10A CBM1 with xylohexaose (1.14 A), and the CBM from its homolog in the Prevotella bryantii B14 Xyn10C (1.68 A) reveal an unanticipated mode for ligand binding. A minimal enzyme mix, composed of the gene products of four of the most highly up-regulated genes during growth on wheat arabinoxylan, depolymerizes the polysaccharide into its component sugars. The combined biochemical and biophysical studies presented here provide a framework for understanding fiber metabolism by an important group within the commensal bacterial population known to influence human health.
-
-	Xylan utilization in human gut commensal bacteria is orchestrated by unique modular organization of polysaccharide-degrading enzymes.,Zhang M, Chekan JR, Dodd D, Hong PY, Radlinski L, Revindran V, Nair SK, Mackie RI, Cann I Proc Natl Acad Sci U S A. 2014 Aug 18. pii: 201406156. PMID:25136124<ref>PMID:25136124</ref>
-
-	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	</div>
-	<div class="pdbe-citations 4qpw" style="background-color:#fffaf0;"></div>
-	== References ==
-	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 13:46, 22 February 2023

OCA — Wed, 22 Feb 2023 13:46:24 GMT

←Older revision		Revision as of 13:46, 22 February 2023
Line 3:		Line 3:
	<StructureSection load='4qpw' size='340' side='right'caption='[[4qpw]], [[Resolution\|resolution]] 1.14Å' scene=''>		<StructureSection load='4qpw' size='340' side='right'caption='[[4qpw]], [[Resolution\|resolution]] 1.14Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4qpw]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Bacteroides_intestinalis_341~~ Bacteroides intestinalis ~~341~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QPW OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4QPW FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4qpw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_intestinalis_DSM_17393 Bacteroides intestinalis DSM 17393]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QPW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4QPW FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=~~XYP~~:~~BETA~~-D-~~XYLOPYRANOSE~~'>~~XYP~~</scene><~~/td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PRD_900117:4beta-beta-xylotriose'>PRD_900117</scene>, <scene name='pdbligand=XYP:BETA-D-XYLOPYRANOSE'>XYP</scene></td></tr>
-	~~<tr id~~='~~related'><td class~~=~~"sblockLbl"><b>[[Related_structure\|Related~~:~~]]</b></td><td class="sblockDat">[[4mgq\|4mgq]]</td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4qpw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qpw OCA], [https://pdbe.org/4qpw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4qpw RCSB], [https://www.ebi.ac.uk/pdbsum/4qpw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4qpw ProSAT]</span></td></tr>
-	~~<tr id='gene~~'>~~<td class="sblockLbl"><b>[[Gene\|Gene:]]~~</b>~~</td><td class="sblockDat">BACINT_04215 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=471870 Bacteroides intestinalis 341])~~</td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4qpw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qpw OCA], [~~http~~://pdbe.org/4qpw PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4qpw RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4qpw PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4qpw ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/B3CET4_9BACE B3CET4_9BACE]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 22:		Line 22:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Bacteroides intestinalis ~~341~~]]	+	[[Category: Bacteroides intestinalis DSM 17393]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Chekan~~, J R~~]]	+	[[Category: Chekan JR]]
-	[[Category: Nair~~, S K]]~~	+	[[Category: Nair SK]]
-	~~[[Category: Hydrolase~~]]	+

OCA at 09:39, 24 April 2019

OCA — Wed, 24 Apr 2019 09:39:37 GMT

←Older revision		Revision as of 09:39, 24 April 2019
Line 1:		Line 1:

	==BiXyn10A CBM1 with Xylohexaose Bound==		==BiXyn10A CBM1 with Xylohexaose Bound==
-	<StructureSection load='4qpw' size='340' side='right' caption='[[4qpw]], [[Resolution\|resolution]] 1.14Å' scene=''>	+	<StructureSection load='4qpw' size='340' side='right'caption='[[4qpw]], [[Resolution\|resolution]] 1.14Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4qpw]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QPW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4QPW FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4qpw]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_intestinalis_341 Bacteroides intestinalis 341]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QPW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4QPW FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=XYP:BETA-D-XYLOPYRANOSE'>XYP</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=XYP:BETA-D-XYLOPYRANOSE'>XYP</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4mgq\|4mgq]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4mgq\|4mgq]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BACINT_04215 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=471870 Bacteroides intestinalis 341])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4qpw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qpw OCA], [http://pdbe.org/4qpw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4qpw RCSB], [http://www.ebi.ac.uk/pdbsum/4qpw PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4qpw ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4qpw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qpw OCA], [http://pdbe.org/4qpw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4qpw RCSB], [http://www.ebi.ac.uk/pdbsum/4qpw PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4qpw ProSAT]</span></td></tr>
	</table>		</table>
Line 21:		Line 22:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Bacteroides intestinalis 341]]
		+	[[Category: Large Structures]]
	[[Category: Chekan, J R]]		[[Category: Chekan, J R]]
	[[Category: Nair, S K]]		[[Category: Nair, S K]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]

OCA at 09:45, 11 August 2016

OCA — Thu, 11 Aug 2016 09:45:04 GMT

←Older revision		Revision as of 09:45, 11 August 2016
Line 1:		Line 1:
		+
	==BiXyn10A CBM1 with Xylohexaose Bound==		==BiXyn10A CBM1 with Xylohexaose Bound==
	<StructureSection load='4qpw' size='340' side='right' caption='[[4qpw]], [[Resolution\|resolution]] 1.14Å' scene=''>		<StructureSection load='4qpw' size='340' side='right' caption='[[4qpw]], [[Resolution\|resolution]] 1.14Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=XYP:BETA-D-XYLOPYRANOSE'>XYP</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=XYP:BETA-D-XYLOPYRANOSE'>XYP</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4mgq\|4mgq]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4mgq\|4mgq]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4qpw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qpw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4qpw RCSB], [http://www.ebi.ac.uk/pdbsum/4qpw PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4qpw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qpw OCA], [http://pdbe.org/4qpw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4qpw RCSB], [http://www.ebi.ac.uk/pdbsum/4qpw PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4qpw ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 15:		Line 16:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 4qpw" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 10:55, 20 January 2015

OCA — Tue, 20 Jan 2015 10:55:16 GMT

←Older revision		Revision as of 10:55, 20 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4qpw]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QPW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4QPW FirstGlance]. <br>		<table><tr><td colspan='2'>[[4qpw]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QPW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4QPW FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=XYP:BETA-D-XYLOPYRANOSE'>XYP</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=XYP:BETA-D-XYLOPYRANOSE'>XYP</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4mgq\|4mgq]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4mgq\|4mgq]]</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4qpw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qpw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4qpw RCSB], [http://www.ebi.ac.uk/pdbsum/4qpw PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4qpw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qpw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4qpw RCSB], [http://www.ebi.ac.uk/pdbsum/4qpw PDBsum]</span></td></tr>
-	<table>	+	</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 19:		Line 19:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Chekan, J R.]]	+	[[Category: Chekan, J R]]
-	[[Category: Nair, S K.]]	+	[[Category: Nair, S K]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]

OCA at 22:31, 1 October 2014

OCA — Wed, 01 Oct 2014 22:31:35 GMT

←Older revision		Revision as of 22:31, 1 October 2014
Line 7:		Line 7:
	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4qpw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qpw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4qpw RCSB], [http://www.ebi.ac.uk/pdbsum/4qpw PDBsum]</span></td></tr>		<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4qpw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qpw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4qpw RCSB], [http://www.ebi.ac.uk/pdbsum/4qpw PDBsum]</span></td></tr>
	<table>		<table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Enzymes that degrade dietary and host-derived glycans represent the most abundant functional activities encoded by genes unique to the human gut microbiome. However, the biochemical activities of a vast majority of the glycan-degrading enzymes are poorly understood. Here, we use transcriptome sequencing to understand the diversity of genes expressed by the human gut bacteria Bacteroides intestinalis and Bacteroides ovatus grown in monoculture with the abundant dietary polysaccharide xylan. The most highly induced carbohydrate active genes encode a unique glycoside hydrolase (GH) family 10 endoxylanase (BiXyn10A or BACINT_04215 and BACOVA_04390) that is highly conserved in the Bacteroidetes xylan utilization system. The BiXyn10A modular architecture consists of a GH10 catalytic module disrupted by a 250 amino acid sequence of unknown function. Biochemical analysis of BiXyn10A demonstrated that such insertion sequences encode a new family of carbohydrate-binding modules (CBMs) that binds to xylose-configured oligosaccharide/polysaccharide ligands, the substrate of the BiXyn10A enzymatic activity. The crystal structures of CBM1 from BiXyn10A (1.8 A), a cocomplex of BiXyn10A CBM1 with xylohexaose (1.14 A), and the CBM from its homolog in the Prevotella bryantii B14 Xyn10C (1.68 A) reveal an unanticipated mode for ligand binding. A minimal enzyme mix, composed of the gene products of four of the most highly up-regulated genes during growth on wheat arabinoxylan, depolymerizes the polysaccharide into its component sugars. The combined biochemical and biophysical studies presented here provide a framework for understanding fiber metabolism by an important group within the commensal bacterial population known to influence human health.
		+
		+	Xylan utilization in human gut commensal bacteria is orchestrated by unique modular organization of polysaccharide-degrading enzymes.,Zhang M, Chekan JR, Dodd D, Hong PY, Radlinski L, Revindran V, Nair SK, Mackie RI, Cann I Proc Natl Acad Sci U S A. 2014 Aug 18. pii: 201406156. PMID:25136124<ref>PMID:25136124</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 09:17, 13 August 2014

OCA — Wed, 13 Aug 2014 09:17:09 GMT

←Older revision		Revision as of 09:17, 13 August 2014
Line 1:		Line 1:
-	'''~~Unreleased structure~~'''	+	==BiXyn10A CBM1 with Xylohexaose Bound==
-		+	<StructureSection load='4qpw' size='340' side='right' caption='[[4qpw]], [[Resolution\|resolution]] 1.14Å' scene=''>
-	~~The entry~~ 4qpw is ~~ON HOLD~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[4qpw]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QPW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4QPW FirstGlance]. <br>
-	~~Authors~~: Chekan, J.R., Nair, S.K.	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=XYP:BETA-D-XYLOPYRANOSE'>XYP</scene><br>
-		+	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4mgq\|4mgq]]</td></tr>
-	~~Description~~: ~~BiXyn10A CBM1 with Xylohexaose Bound~~	+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4qpw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qpw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4qpw RCSB], [http://www.ebi.ac.uk/pdbsum/4qpw PDBsum]</span></td></tr>
		+	<table>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Chekan, J R.]]
		+	[[Category: Nair, S K.]]
		+	[[Category: Hydrolase]]

OCA: Protected "4qpw" [edit=sysop:move=sysop]

OCA — Wed, 02 Jul 2014 07:28:21 GMT

Protected "4qpw" [edit=sysop:move=sysop]

←Older revision

Revision as of 07:28, 2 July 2014

OCA: New page: '''Unreleased structure''' The entry 4qpw is ON HOLD Authors: Chekan, J.R., Nair, S.K. Description: BiXyn10A CBM1 with Xylohexaose Bound

OCA — Wed, 02 Jul 2014 07:28:19 GMT

New page: '''Unreleased structure''' The entry 4qpw is ON HOLD Authors: Chekan, J.R., Nair, S.K. Description: BiXyn10A CBM1 with Xylohexaose Bound

New page

'''Unreleased structure'''

The entry 4qpw is ON HOLD

Authors: Chekan, J.R., Nair, S.K.

Description: BiXyn10A CBM1 with Xylohexaose Bound