4r4g - Revision history

OCA at 11:59, 1 February 2023

OCA — Wed, 01 Feb 2023 11:59:56 GMT

←Older revision		Revision as of 11:59, 1 February 2023
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	==Crystal structure of a putative lipoprotein (ycdA) from Bacillus subtilis subsp. subtilis str. 168 at 2.62 A resolution==		==Crystal structure of a putative lipoprotein (ycdA) from Bacillus subtilis subsp. subtilis str. 168 at 2.62 A resolution==
-	<StructureSection load='4r4g' size='340' side='right' caption='[[4r4g]], [[Resolution\|resolution]] 2.62Å' scene=''>	+	<StructureSection load='4r4g' size='340' side='right'caption='[[4r4g]], [[Resolution\|resolution]] 2.62Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4r4g]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Bacsu Bacsu~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4R4G OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4R4G FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4r4g]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis_str._168 Bacillus subtilis subsp. subtilis str. 168]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4R4G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4R4G FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"~~><scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>
-	~~<tr~~ id~~='NonStdRes'><td class~~="~~sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat~~"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene><~~/td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4r4g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4r4g OCA], [https://pdbe.org/4r4g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4r4g RCSB], [https://www.ebi.ac.uk/pdbsum/4r4g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4r4g ProSAT]</span></td></tr>
-	~~<tr id~~='~~gene'><td class~~=~~"sblockLbl"><b>[[Gene\|Gene~~:~~]]</b~~></td>~~<td class="sblockDat">ycdA, BSU02780 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224308 BACSU])~~</td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4r4g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4r4g OCA], [~~http~~://pdbe.org/4r4g PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4r4g RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4r4g PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4r4g ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/YCDA_BACSU YCDA_BACSU]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Bacsu~~]]	+	[[Category: Bacillus subtilis subsp. subtilis str. 168]]
-	[[Category: ~~Structural genomic]]~~	+	[[Category: Large Structures]]
-	~~[[Category: Domains connected by kinked-helix]]~~	+
-	~~[[Category: Jcsg]]~~	+
-	~~[[Category: N-terminal domain has ig-like fold]]~~	+
-	~~[[Category: PSI, Protein structure initiative]]~~	+
-	~~[[Category: Psi-biology]]~~	+
-	~~[[Category: Two domain protein]]~~	+
-	~~[[Category: Unknown function~~]]	+

OCA at 09:01, 22 November 2017

OCA — Wed, 22 Nov 2017 09:01:09 GMT

←Older revision		Revision as of 09:01, 22 November 2017
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	<StructureSection load='4r4g' size='340' side='right' caption='[[4r4g]], [[Resolution\|resolution]] 2.62Å' scene=''>		<StructureSection load='4r4g' size='340' side='right' caption='[[4r4g]], [[Resolution\|resolution]] 2.62Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4r4g]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4R4G OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4R4G FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4r4g]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacsu Bacsu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4R4G OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4R4G FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ycdA, BSU02780 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224308 BACSU])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4r4g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4r4g OCA], [http://pdbe.org/4r4g PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4r4g RCSB], [http://www.ebi.ac.uk/pdbsum/4r4g PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4r4g ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4r4g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4r4g OCA], [http://pdbe.org/4r4g PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4r4g RCSB], [http://www.ebi.ac.uk/pdbsum/4r4g PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4r4g ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Bacsu]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Domains connected by kinked-helix]]		[[Category: Domains connected by kinked-helix]]

OCA at 17:28, 18 January 2017

OCA — Wed, 18 Jan 2017 17:28:01 GMT

←Older revision		Revision as of 17:28, 18 January 2017
Line 1:		Line 1:
		+
	==Crystal structure of a putative lipoprotein (ycdA) from Bacillus subtilis subsp. subtilis str. 168 at 2.62 A resolution==		==Crystal structure of a putative lipoprotein (ycdA) from Bacillus subtilis subsp. subtilis str. 168 at 2.62 A resolution==
	<StructureSection load='4r4g' size='340' side='right' caption='[[4r4g]], [[Resolution\|resolution]] 2.62Å' scene=''>		<StructureSection load='4r4g' size='340' side='right' caption='[[4r4g]], [[Resolution\|resolution]] 2.62Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4r4g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4r4g OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4r4g RCSB], [http://www.ebi.ac.uk/pdbsum/4r4g PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4r4g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4r4g OCA], [http://pdbe.org/4r4g PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4r4g RCSB], [http://www.ebi.ac.uk/pdbsum/4r4g PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4r4g ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__

OCA at 14:54, 5 January 2015

OCA — Mon, 05 Jan 2015 14:54:23 GMT

←Older revision		Revision as of 14:54, 5 January 2015
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	==Crystal structure of a putative lipoprotein (ycdA) from Bacillus subtilis subsp. subtilis str. 168 at 2.62 A resolution==
-		+	<StructureSection load='4r4g' size='340' side='right' caption='[[4r4g]], [[Resolution\|resolution]] 2.62Å' scene=''>
-	~~The entry 4r4g is ON HOLD~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[4r4g]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4R4G OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4R4G FirstGlance]. <br>
-	~~Authors: Joint Center for Structural Genomics (JCSG)~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>
-		+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	~~Description:~~ Crystal structure of a putative lipoprotein (ycdA) from Bacillus subtilis subsp. subtilis str. 168 at 2.62 A resolution	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4r4g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4r4g OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4r4g RCSB], [http://www.ebi.ac.uk/pdbsum/4r4g PDBsum]</span></td></tr>
		+	</table>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Structural genomic]]
		+	[[Category: Domains connected by kinked-helix]]
		+	[[Category: Jcsg]]
		+	[[Category: N-terminal domain has ig-like fold]]
		+	[[Category: PSI, Protein structure initiative]]
		+	[[Category: Psi-biology]]
		+	[[Category: Two domain protein]]
		+	[[Category: Unknown function]]

OCA: Protected "4r4g" [edit=sysop:move=sysop]

OCA — Wed, 27 Aug 2014 07:00:18 GMT

Protected "4r4g" [edit=sysop:move=sysop]

←Older revision

Revision as of 07:00, 27 August 2014

OCA: New page: '''Unreleased structure''' The entry 4r4g is ON HOLD Authors: Joint Center for Structural Genomics (JCSG) Description: Crystal structure of a putative lipoprotein (ycdA) from Bacillus ...

OCA — Wed, 27 Aug 2014 07:00:15 GMT

New page: '''Unreleased structure''' The entry 4r4g is ON HOLD Authors: Joint Center for Structural Genomics (JCSG) Description: Crystal structure of a putative lipoprotein (ycdA) from Bacillus ...

New page

'''Unreleased structure'''

The entry 4r4g is ON HOLD

Authors: Joint Center for Structural Genomics (JCSG)

Description: Crystal structure of a putative lipoprotein (ycdA) from Bacillus subtilis subsp. subtilis str. 168 at 2.62 A resolution