4rsw - Revision history

OCA at 08:27, 8 March 2023

OCA — Wed, 08 Mar 2023 08:27:22 GMT

←Older revision		Revision as of 08:27, 8 March 2023
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	==The structure of the effector protein from Pseudomonas syringae pv. syringae strain 61==		==The structure of the effector protein from Pseudomonas syringae pv. syringae strain 61==
-	<StructureSection load='4rsw' size='340' side='right' caption='[[4rsw]], [[Resolution\|resolution]] 1.90Å' scene=''>	+	<StructureSection load='4rsw' size='340' side='right'caption='[[4rsw]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4rsw]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Psesy Psesy~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RSW OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4RSW FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4rsw]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_syringae_pv._syringae Pseudomonas syringae pv. syringae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RSW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4RSW FirstGlance]. <br>
-	</td></tr><tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>~~</td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	~~<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4rsx\|4rsx]]</td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4rsw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rsw OCA], [https://pdbe.org/4rsw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4rsw RCSB], [https://www.ebi.ac.uk/pdbsum/4rsw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4rsw ProSAT]</span></td></tr>
-	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">hopA1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=321 PSESY])~~</td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4rsw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rsw OCA], [~~http~~://pdbe.org/4rsw PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4rsw RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4rsw PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4rsw ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q83YM3_PSESY Q83YM3_PSESY]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Psesy~~]]	+	[[Category: Large Structures]]
-	[[Category: ~~Park, Y~~]]	+	[[Category: Pseudomonas syringae pv. syringae]]
-	[[Category: ~~Rhee, S~~]]	+	[[Category: Park Y]]
-	[[Category: ~~Shin, I~~]]	+	[[Category: Rhee S]]
-	[[Category: ~~Alpha/beta fold]]~~	+	[[Category: Shin I]]
-	~~[[Category: Effector]]~~	+
-	~~[[Category: Signaling protein~~]]	+

OCA at 09:09, 22 November 2017

OCA — Wed, 22 Nov 2017 09:09:37 GMT

←Older revision		Revision as of 09:09, 22 November 2017
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	<StructureSection load='4rsw' size='340' side='right' caption='[[4rsw]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='4rsw' size='340' side='right' caption='[[4rsw]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4rsw]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RSW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4RSW FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4rsw]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Psesy Psesy]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RSW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4RSW FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4rsx\|4rsx]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4rsx\|4rsx]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">hopA1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=321 PSESY])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4rsw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rsw OCA], [http://pdbe.org/4rsw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4rsw RCSB], [http://www.ebi.ac.uk/pdbsum/4rsw PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4rsw ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4rsw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rsw OCA], [http://pdbe.org/4rsw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4rsw RCSB], [http://www.ebi.ac.uk/pdbsum/4rsw PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4rsw ProSAT]</span></td></tr>
	</table>		</table>
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Psesy]]
	[[Category: Park, Y]]		[[Category: Park, Y]]
	[[Category: Rhee, S]]		[[Category: Rhee, S]]

OCA at 17:20, 18 January 2017

OCA — Wed, 18 Jan 2017 17:20:14 GMT

←Older revision		Revision as of 17:20, 18 January 2017
Line 1:		Line 1:
		+
	==The structure of the effector protein from Pseudomonas syringae pv. syringae strain 61==		==The structure of the effector protein from Pseudomonas syringae pv. syringae strain 61==
	<StructureSection load='4rsw' size='340' side='right' caption='[[4rsw]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='4rsw' size='340' side='right' caption='[[4rsw]], [[Resolution\|resolution]] 1.90Å' scene=''>
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	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4rsx\|4rsx]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4rsx\|4rsx]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4rsw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rsw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4rsw RCSB], [http://www.ebi.ac.uk/pdbsum/4rsw PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4rsw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rsw OCA], [http://pdbe.org/4rsw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4rsw RCSB], [http://www.ebi.ac.uk/pdbsum/4rsw PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4rsw ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
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	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 4rsw" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 11:47, 11 March 2015

OCA — Wed, 11 Mar 2015 11:47:46 GMT

←Older revision		Revision as of 11:47, 11 March 2015
Line 1:		Line 1:
-	'''~~Unreleased~~ structure'''	+	==The structure of the effector protein from Pseudomonas syringae pv. syringae strain 61==
		+	<StructureSection load='4rsw' size='340' side='right' caption='[[4rsw]], [[Resolution\|resolution]] 1.90Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[4rsw]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RSW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4RSW FirstGlance]. <br>
		+	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4rsx\|4rsx]]</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4rsw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rsw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4rsw RCSB], [http://www.ebi.ac.uk/pdbsum/4rsw PDBsum]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Plants have evolved to protect themselves against pathogen attack; in these competitions, many Gram-negative bacteria translocate pathogen-originated proteins known as effectors directly into plant cells to interfere with cellular processes. Effector-triggered immunity (ETI) is a plant defense mechanism in which plant resistance proteins recognize the presence of effectors and initiate immune responses. Enhanced disease susceptibility 1 (EDS1) in Arabidopsis thaliana serves as a central node protein for basal immune resistance and ETI by interacting dynamically with other immune regulatory or resistance proteins. Recently, the effector HopA1 from Pseudomonas syringae was shown to affect these EDS1 complexes by binding EDS1 directly and activating the immune response signaling pathway. Here, we report the crystal structure of the effector HopA1 from P. syringae pv. syringae strain 61 and tomato strain DC3000. HopA1, a sequence-unrelated protein to EDS1, has an alpha+beta fold in which the central antiparallel beta-sheet is flanked by helices. A similar structural domain, an alpha/beta fold, is one of the two domains in both EDS1 and the EDS1-interacting protein SAG101, and plays a crucial role in forming the EDS1 complex. Further analyses suggest structural similarity and differences between HopA1 and the alpha/beta fold of SAG101, as well as between two HopA1s from different pathovars. Our structural analysis provides a foundation for understanding the molecular basis of the effect of HopA1 on plant immunity.

-	~~The entry 4rsw is ON HOLD until Paper Publication~~	+	Crystal structure of the effector protein HopA1 from Pseudomonas syringae.,Park Y, Shin I, Rhee S J Struct Biol. 2015 Mar;189(3):276-80. doi: 10.1016/j.jsb.2015.02.002. Epub 2015 , Feb 11. PMID:25681297<ref>PMID:25681297</ref>

-	~~Authors: Park~~, Y.~~, Shin, I., Rhee,~~ S.	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~Description: The structure of the effector protein from Pseudomonas syringae pv. syringae strain 61~~	+	== References ==
-	~~[[Category: Unreleased Structures]]~~	+	<references/>
		+	__TOC__
		+	</StructureSection>
	[[Category: Park, Y]]		[[Category: Park, Y]]
	[[Category: Rhee, S]]		[[Category: Rhee, S]]
	[[Category: Shin, I]]		[[Category: Shin, I]]
		+	[[Category: Alpha/beta fold]]
		+	[[Category: Effector]]
		+	[[Category: Signaling protein]]

OCA at 17:19, 24 December 2014

OCA — Wed, 24 Dec 2014 17:19:17 GMT

←Older revision		Revision as of 17:19, 24 December 2014
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	Description: The structure of the effector protein from Pseudomonas syringae pv. syringae strain 61		Description: The structure of the effector protein from Pseudomonas syringae pv. syringae strain 61
		+	[[Category: Unreleased Structures]]
		+	[[Category: Park, Y]]
		+	[[Category: Rhee, S]]
		+	[[Category: Shin, I]]

OCA at 06:46, 26 November 2014

OCA — Wed, 26 Nov 2014 06:46:12 GMT

←Older revision		Revision as of 06:46, 26 November 2014
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4rsw is ON HOLD	+	The entry 4rsw is ON HOLD until Paper Publication

-	Authors: ~~Yangshin~~ Park, ~~Inchul~~ Shin, ~~Sangkee~~ Rhee	+	Authors: Park, Y., Shin, I., Rhee, S.

	Description: The structure of the effector protein from Pseudomonas syringae pv. syringae strain 61		Description: The structure of the effector protein from Pseudomonas syringae pv. syringae strain 61

OCA: Protected "4rsw" [edit=sysop:move=sysop]

OCA — Wed, 19 Nov 2014 11:33:34 GMT

Protected "4rsw" [edit=sysop:move=sysop]

←Older revision

Revision as of 11:33, 19 November 2014

OCA: New page: '''Unreleased structure''' The entry 4rsw is ON HOLD Authors: Yangshin Park, Inchul Shin, Sangkee Rhee Description: The structure of the effector protein from Pseudomonas syringae pv. ...

OCA — Wed, 19 Nov 2014 11:33:33 GMT

New page: '''Unreleased structure''' The entry 4rsw is ON HOLD Authors: Yangshin Park, Inchul Shin, Sangkee Rhee Description: The structure of the effector protein from Pseudomonas syringae pv. ...

New page

'''Unreleased structure'''

The entry 4rsw is ON HOLD

Authors: Yangshin Park, Inchul Shin, Sangkee Rhee

Description: The structure of the effector protein from Pseudomonas syringae pv. syringae strain 61