4rt5 - Revision history

OCA at 08:27, 8 March 2023

OCA — Wed, 08 Mar 2023 08:27:37 GMT

←Older revision		Revision as of 08:27, 8 March 2023
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	<StructureSection load='4rt5' size='340' side='right'caption='[[4rt5]], [[Resolution\|resolution]] 1.50Å' scene=''>		<StructureSection load='4rt5' size='340' side='right'caption='[[4rt5]], [[Resolution\|resolution]] 1.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4rt5]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Plal2 Plal2~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RT5 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4RT5 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4rt5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Planctopirus_limnophila_DSM_3776 Planctopirus limnophila DSM 3776]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RT5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4RT5 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene~~></td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
-	~~<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4rt5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rt5 OCA], [https://pdbe.org/4rt5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4rt5 RCSB], [https://www.ebi.ac.uk/pdbsum/4rt5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4rt5 ProSAT]</span></td></tr>
-	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Plim_1428 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=521674 PLAL2])</td></tr>~~	+
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lactoylglutathione_lyase Lactoylglutathione lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.4.1.5 4.4.1.5] </span></td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4rt5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rt5 OCA], [~~http~~://pdbe.org/4rt5 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4rt5 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4rt5 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4rt5 ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/D5SVJ2_PLAL2 D5SVJ2_PLAL2]

	==See Also==		==See Also==
-	*[[Dioxygenase\|Dioxygenase]]	+	*[[Dioxygenase 3D structures\|Dioxygenase 3D structures]]
		+	*[[Glyoxalase 3D structures\|Glyoxalase 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Lactoylglutathione lyase]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Plal2~~]]	+	[[Category: Planctopirus limnophila DSM 3776]]
-	[[Category: Bearden, J]]	+	[[Category: Bearden J]]
-	[[Category: Joachimiak, A]]	+	[[Category: Joachimiak A]]
-	[[Category: Kim, Y]]	+	[[Category: Kim Y]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Wu R]]
-	[[Category: Wu, R]]	+
-	~~[[Category: A/b fold]]~~	+
-	~~[[Category: Cytosolic]]~~	+
-	~~[[Category: Mcsg]]~~	+
-	~~[[Category: Oxidoreductase]]~~	+
-	~~[[Category: Psi-biology~~]]	+

OCA at 10:05, 1 May 2019

OCA — Wed, 01 May 2019 10:05:23 GMT

←Older revision		Revision as of 10:05, 1 May 2019
Line 1:		Line 1:

	==The crystal structure of a glyoxalase/bleomycin resistance protein/dioxygenase protein from planctomyces limnophilus dsm 3776==		==The crystal structure of a glyoxalase/bleomycin resistance protein/dioxygenase protein from planctomyces limnophilus dsm 3776==
-	<StructureSection load='4rt5' size='340' side='right' caption='[[4rt5]], [[Resolution\|resolution]] 1.50Å' scene=''>	+	<StructureSection load='4rt5' size='340' side='right'caption='[[4rt5]], [[Resolution\|resolution]] 1.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4rt5]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RT5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4RT5 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4rt5]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Plal2 Plal2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RT5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4RT5 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Plim_1428 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=521674 PLAL2])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lactoylglutathione_lyase Lactoylglutathione lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.4.1.5 4.4.1.5] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lactoylglutathione_lyase Lactoylglutathione lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.4.1.5 4.4.1.5] </span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4rt5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rt5 OCA], [http://pdbe.org/4rt5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4rt5 RCSB], [http://www.ebi.ac.uk/pdbsum/4rt5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4rt5 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4rt5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rt5 OCA], [http://pdbe.org/4rt5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4rt5 RCSB], [http://www.ebi.ac.uk/pdbsum/4rt5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4rt5 ProSAT]</span></td></tr>
Line 15:		Line 16:
	</StructureSection>		</StructureSection>
	[[Category: Lactoylglutathione lyase]]		[[Category: Lactoylglutathione lyase]]
		+	[[Category: Large Structures]]
		+	[[Category: Plal2]]
	[[Category: Bearden, J]]		[[Category: Bearden, J]]
	[[Category: Joachimiak, A]]		[[Category: Joachimiak, A]]

OCA at 17:32, 18 January 2017

OCA — Wed, 18 Jan 2017 17:32:58 GMT

←Older revision		Revision as of 17:32, 18 January 2017
Line 1:		Line 1:
		+
	==The crystal structure of a glyoxalase/bleomycin resistance protein/dioxygenase protein from planctomyces limnophilus dsm 3776==		==The crystal structure of a glyoxalase/bleomycin resistance protein/dioxygenase protein from planctomyces limnophilus dsm 3776==
	<StructureSection load='4rt5' size='340' side='right' caption='[[4rt5]], [[Resolution\|resolution]] 1.50Å' scene=''>		<StructureSection load='4rt5' size='340' side='right' caption='[[4rt5]], [[Resolution\|resolution]] 1.50Å' scene=''>
Line 6:		Line 7:
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lactoylglutathione_lyase Lactoylglutathione lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.4.1.5 4.4.1.5] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lactoylglutathione_lyase Lactoylglutathione lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.4.1.5 4.4.1.5] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4rt5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rt5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4rt5 RCSB], [http://www.ebi.ac.uk/pdbsum/4rt5 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4rt5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rt5 OCA], [http://pdbe.org/4rt5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4rt5 RCSB], [http://www.ebi.ac.uk/pdbsum/4rt5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4rt5 ProSAT]</span></td></tr>
	</table>		</table>
		+
		+	==See Also==
		+	*[[Dioxygenase\|Dioxygenase]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 09:45, 3 December 2014

OCA — Wed, 03 Dec 2014 09:45:35 GMT

←Older revision		Revision as of 09:45, 3 December 2014
Line 1:		Line 1:
-	'''~~Unreleased structure~~'''	+	==The crystal structure of a glyoxalase/bleomycin resistance protein/dioxygenase protein from planctomyces limnophilus dsm 3776==
-		+	<StructureSection load='4rt5' size='340' side='right' caption='[[4rt5]], [[Resolution\|resolution]] 1.50Å' scene=''>
-	~~The entry~~ 4rt5 is ~~ON HOLD~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[4rt5]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RT5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4RT5 FirstGlance]. <br>
-	~~Authors~~: Wu, R., ~~Bearden~~, J., ~~Kim, Y~~., Joachimiak, A., ~~Midwest Center for~~ Structural ~~Genomics (MCSG)~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
-		+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	~~Description~~: ~~The crystal structure of a glyoxalase/bleomycin resistance protein~~/~~dioxygenase protein from planctomyces limnophilus dsm 3776~~	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lactoylglutathione_lyase Lactoylglutathione lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.4.1.5 4.4.1.5] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4rt5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rt5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4rt5 RCSB], [http://www.ebi.ac.uk/pdbsum/4rt5 PDBsum]</span></td></tr>
		+	</table>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Lactoylglutathione lyase]]
		+	[[Category: Bearden, J]]
		+	[[Category: Joachimiak, A]]
		+	[[Category: Kim, Y]]
		+	[[Category: Structural genomic]]
		+	[[Category: Wu, R]]
		+	[[Category: A/b fold]]
		+	[[Category: Cytosolic]]
		+	[[Category: Mcsg]]
		+	[[Category: Oxidoreductase]]
		+	[[Category: Psi-biology]]

OCA: Protected "4rt5" [edit=sysop:move=sysop]

OCA — Wed, 19 Nov 2014 11:33:56 GMT

Protected "4rt5" [edit=sysop:move=sysop]

←Older revision

Revision as of 11:33, 19 November 2014

OCA: New page: '''Unreleased structure''' The entry 4rt5 is ON HOLD Authors: Wu, R., Bearden, J., Kim, Y., Joachimiak, A., Midwest Center for Structural Genomics (MCSG) Description: The crystal struc...

OCA — Wed, 19 Nov 2014 11:33:55 GMT

New page: '''Unreleased structure''' The entry 4rt5 is ON HOLD Authors: Wu, R., Bearden, J., Kim, Y., Joachimiak, A., Midwest Center for Structural Genomics (MCSG) Description: The crystal struc...

New page

'''Unreleased structure'''

The entry 4rt5 is ON HOLD

Authors: Wu, R., Bearden, J., Kim, Y., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Description: The crystal structure of a glyoxalase/bleomycin resistance protein/dioxygenase protein from planctomyces limnophilus dsm 3776