4ubh - Revision history

OCA at 07:27, 27 September 2023

OCA — Wed, 27 Sep 2023 07:27:30 GMT

←Older revision		Revision as of 07:27, 27 September 2023
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4ubh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4UBH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4UBH FirstGlance]. <br>		<table><tr><td colspan='2'>[[4ubh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4UBH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4UBH FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.81Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ubh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ubh OCA], [https://pdbe.org/4ubh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ubh RCSB], [https://www.ebi.ac.uk/pdbsum/4ubh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ubh ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ubh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ubh OCA], [https://pdbe.org/4ubh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ubh RCSB], [https://www.ebi.ac.uk/pdbsum/4ubh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ubh ProSAT]</span></td></tr>
	</table>		</table>

OCA at 08:13, 22 March 2023

OCA — Wed, 22 Mar 2023 08:13:19 GMT

←Older revision		Revision as of 08:13, 22 March 2023
Line 1:		Line 1:

	==Resting state of rat cysteine dioxygenase Y157F variant==		==Resting state of rat cysteine dioxygenase Y157F variant==
-	<StructureSection load='4ubh' size='340' side='right' caption='[[4ubh]], [[Resolution\|resolution]] 1.81Å' scene=''>	+	<StructureSection load='4ubh' size='340' side='right'caption='[[4ubh]], [[Resolution\|resolution]] 1.81Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4ubh]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Buffalo_rat Buffalo rat~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4UBH OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4UBH FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4ubh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4UBH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4UBH FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene~~></td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Cdo1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10116 Buffalo rat])</td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ubh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ubh OCA], [https://pdbe.org/4ubh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ubh RCSB], [https://www.ebi.ac.uk/pdbsum/4ubh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ubh ProSAT]</span></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cysteine_dioxygenase Cysteine dioxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.13.11.20 1.13.11.20] </span></td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4ubh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ubh OCA], [~~http~~://pdbe.org/4ubh PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4ubh RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4ubh PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4ubh ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/CDO1_RAT CDO1_RAT]
		+
		+	==See Also==
		+	*[[Dioxygenase 3D structures\|Dioxygenase 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Buffalo rat~~]]	+	[[Category: Large Structures]]
-	[[Category: ~~Cysteine dioxygenase~~]]	+	[[Category: Rattus norvegicus]]
-	[[Category: Fellner, M]]	+	[[Category: Fellner M]]
-	[[Category: Jameson~~, G N.L~~]]	+	[[Category: Jameson GNL]]
-	[[Category: Tchesnokov~~, E P~~]]	+	[[Category: Tchesnokov EP]]
-	[[Category: Wilbanks~~, S M]]~~	+	[[Category: Wilbanks SM]]
-	~~[[Category: Cupin]]~~	+
-	~~[[Category: Non-heme mono-iron]]~~	+
-	~~[[Category: Oxidoreductase]]~~	+
-	~~[[Category: Tyrosine to phenylalanine substitution~~]]	+

OCA at 09:22, 22 November 2017

OCA — Wed, 22 Nov 2017 09:22:01 GMT

←Older revision		Revision as of 09:22, 22 November 2017
Line 3:		Line 3:
	<StructureSection load='4ubh' size='340' side='right' caption='[[4ubh]], [[Resolution\|resolution]] 1.81Å' scene=''>		<StructureSection load='4ubh' size='340' side='right' caption='[[4ubh]], [[Resolution\|resolution]] 1.81Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4ubh]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4UBH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4UBH FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4ubh]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Buffalo_rat Buffalo rat]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4UBH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4UBH FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Cdo1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10116 Buffalo rat])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cysteine_dioxygenase Cysteine dioxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.13.11.20 1.13.11.20] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cysteine_dioxygenase Cysteine dioxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.13.11.20 1.13.11.20] </span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ubh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ubh OCA], [http://pdbe.org/4ubh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ubh RCSB], [http://www.ebi.ac.uk/pdbsum/4ubh PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ubh ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ubh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ubh OCA], [http://pdbe.org/4ubh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ubh RCSB], [http://www.ebi.ac.uk/pdbsum/4ubh PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ubh ProSAT]</span></td></tr>
	</table>		</table>
-
-	==See Also==
-	*[[Dioxygenase\|Dioxygenase]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Buffalo rat]]
	[[Category: Cysteine dioxygenase]]		[[Category: Cysteine dioxygenase]]
	[[Category: Fellner, M]]		[[Category: Fellner, M]]

OCA at 01:11, 19 January 2017

OCA — Thu, 19 Jan 2017 01:11:29 GMT

←Older revision		Revision as of 01:11, 19 January 2017
Line 1:		Line 1:
		+
	==Resting state of rat cysteine dioxygenase Y157F variant==		==Resting state of rat cysteine dioxygenase Y157F variant==
	<StructureSection load='4ubh' size='340' side='right' caption='[[4ubh]], [[Resolution\|resolution]] 1.81Å' scene=''>		<StructureSection load='4ubh' size='340' side='right' caption='[[4ubh]], [[Resolution\|resolution]] 1.81Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cysteine_dioxygenase Cysteine dioxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.13.11.20 1.13.11.20] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cysteine_dioxygenase Cysteine dioxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.13.11.20 1.13.11.20] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ubh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ubh OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ubh RCSB], [http://www.ebi.ac.uk/pdbsum/4ubh PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ubh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ubh OCA], [http://pdbe.org/4ubh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ubh RCSB], [http://www.ebi.ac.uk/pdbsum/4ubh PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ubh ProSAT]</span></td></tr>
	</table>		</table>
		+
		+	==See Also==
		+	*[[Dioxygenase\|Dioxygenase]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 12:02, 12 February 2015

OCA — Thu, 12 Feb 2015 12:02:12 GMT

←Older revision		Revision as of 12:02, 12 February 2015
Line 1:		Line 1:
-	'''~~Unreleased structure~~'''	+	==Resting state of rat cysteine dioxygenase Y157F variant==
-		+	<StructureSection load='4ubh' size='340' side='right' caption='[[4ubh]], [[Resolution\|resolution]] 1.81Å' scene=''>
-	~~The entry~~ 4ubh is ~~ON HOLD until Paper Publication~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[4ubh]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4UBH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4UBH FirstGlance]. <br>
-	~~Authors~~: ~~Tchesnokov~~, E.P., ~~Fellner, M~~., ~~Jameson, G~~.N.L., ~~Wilbanks, S~~.M.	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cysteine_dioxygenase Cysteine dioxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.13.11.20 1.13.11.20] </span></td></tr>
-	~~Description: Resting state of rat cysteine dioxygenase Y157F variant~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ubh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ubh OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ubh RCSB], [http://www.ebi.ac.uk/pdbsum/4ubh PDBsum]</span></td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	</table>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Cysteine dioxygenase]]
	[[Category: Fellner, M]]		[[Category: Fellner, M]]
-	[[Category: ~~Tchesnokov~~, E.P]]	+	[[Category: Jameson, G N.L]]
-	[[Category: ~~Jameson~~, ~~G.N.L~~]]	+	[[Category: Tchesnokov, E P]]
-	[[Category: Wilbanks, S.M]]	+	[[Category: Wilbanks, S M]]
		+	[[Category: Cupin]]
		+	[[Category: Non-heme mono-iron]]
		+	[[Category: Oxidoreductase]]
		+	[[Category: Tyrosine to phenylalanine substitution]]

OCA at 18:19, 24 December 2014

OCA — Wed, 24 Dec 2014 18:19:27 GMT

←Older revision		Revision as of 18:19, 24 December 2014
Line 6:		Line 6:

	Description: Resting state of rat cysteine dioxygenase Y157F variant		Description: Resting state of rat cysteine dioxygenase Y157F variant
		+	[[Category: Unreleased Structures]]
		+	[[Category: Fellner, M]]
		+	[[Category: Tchesnokov, E.P]]
		+	[[Category: Jameson, G.N.L]]
		+	[[Category: Wilbanks, S.M]]

OCA at 08:41, 10 September 2014

OCA — Wed, 10 Sep 2014 08:41:35 GMT

←Older revision		Revision as of 08:41, 10 September 2014
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4ubh is ON HOLD	+	The entry 4ubh is ON HOLD until Paper Publication

	Authors: Tchesnokov, E.P., Fellner, M., Jameson, G.N.L., Wilbanks, S.M.		Authors: Tchesnokov, E.P., Fellner, M., Jameson, G.N.L., Wilbanks, S.M.

	Description: Resting state of rat cysteine dioxygenase Y157F variant		Description: Resting state of rat cysteine dioxygenase Y157F variant

OCA: Protected "4ubh" [edit=sysop:move=sysop]

OCA — Wed, 20 Aug 2014 15:08:37 GMT

Protected "4ubh" [edit=sysop:move=sysop]

←Older revision

Revision as of 15:08, 20 August 2014

OCA: New page: '''Unreleased structure''' The entry 4ubh is ON HOLD Authors: Tchesnokov, E.P., Fellner, M., Jameson, G.N.L., Wilbanks, S.M. Description: Resting state of rat cysteine dioxygenase Y157...

OCA — Wed, 20 Aug 2014 15:08:35 GMT

New page: '''Unreleased structure''' The entry 4ubh is ON HOLD Authors: Tchesnokov, E.P., Fellner, M., Jameson, G.N.L., Wilbanks, S.M. Description: Resting state of rat cysteine dioxygenase Y157...

New page

'''Unreleased structure'''

The entry 4ubh is ON HOLD

Authors: Tchesnokov, E.P., Fellner, M., Jameson, G.N.L., Wilbanks, S.M.

Description: Resting state of rat cysteine dioxygenase Y157F variant