4xbk - Revision history

OCA at 09:02, 20 March 2024

OCA — Wed, 20 Mar 2024 09:02:19 GMT

←Older revision		Revision as of 09:02, 20 March 2024
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4xbk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Levilactobacillus_brevis_ATCC_14869_=_DSM_20054 Levilactobacillus brevis ATCC 14869 = DSM 20054]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4XBK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4XBK FirstGlance]. <br>		<table><tr><td colspan='2'>[[4xbk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Levilactobacillus_brevis_ATCC_14869_=_DSM_20054 Levilactobacillus brevis ATCC 14869 = DSM 20054]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4XBK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4XBK FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.951Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4xbk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4xbk OCA], [https://pdbe.org/4xbk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4xbk RCSB], [https://www.ebi.ac.uk/pdbsum/4xbk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4xbk ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4xbk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4xbk OCA], [https://pdbe.org/4xbk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4xbk RCSB], [https://www.ebi.ac.uk/pdbsum/4xbk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4xbk ProSAT]</span></td></tr>
	</table>		</table>

OCA at 21:21, 12 April 2023

OCA — Wed, 12 Apr 2023 21:21:23 GMT

←Older revision		Revision as of 21:21, 12 April 2023
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	<StructureSection load='4xbk' size='340' side='right'caption='[[4xbk]], [[Resolution\|resolution]] 1.95Å' scene=''>		<StructureSection load='4xbk' size='340' side='right'caption='[[4xbk]], [[Resolution\|resolution]] 1.95Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4xbk]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Lactobacillus_brevis_atcc_14869 Lactobacillus~~ brevis ~~atcc~~ 14869]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4XBK OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4XBK FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4xbk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Levilactobacillus_brevis_ATCC_14869_=_DSM_20054 Levilactobacillus brevis ATCC 14869 = DSM 20054]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4XBK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4XBK FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene~~></td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">deoC, HMPREF0495_01319 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=649758 Lactobacillus brevis ATCC 14869])</td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4xbk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4xbk OCA], [https://pdbe.org/4xbk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4xbk RCSB], [https://www.ebi.ac.uk/pdbsum/4xbk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4xbk ProSAT]</span></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Deoxyribose-phosphate_aldolase Deoxyribose-phosphate aldolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.2.4 4.1.2.4] </span></td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4xbk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4xbk OCA], [~~http~~://pdbe.org/4xbk PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4xbk RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4xbk PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4xbk ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/~~U2PI02_LACBR U2PI02_LACBR]~~] Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate.[HAMAP-Rule:MF_00114~~][SAAS:SAAS00678635~~]	+	[https://www.uniprot.org/uniprot/U2PI02_LEVBR U2PI02_LEVBR] Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate.[HAMAP-Rule:MF_00114]

	==See Also==		==See Also==
Line 16:		Line 14:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Deoxyribose-phosphate aldolase]]
-	[[Category: Lactobacillus brevis atcc 14869]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Chen, Q]]	+	[[Category: Levilactobacillus brevis ATCC 14869 = DSM 20054]]
-	[[Category: Jiao, X C]]	+	[[Category: Chen Q]]
-	[[Category: Kong, X D]]	+	[[Category: Jiao X-C]]
-	[[Category: Pan, J]]	+	[[Category: Kong X-D]]
-	[[Category: Xu, G C]]	+	[[Category: Pan J]]
-	[[Category: Xu, J H]]	+	[[Category: Xu G-C]]
-	[[Category: Zhang, Z J]]	+	[[Category: Xu J-H]]
-	~~[[Category: Lyase~~]]	+	[[Category: Zhang Z-J]]

OCA at 07:22, 29 May 2019

OCA — Wed, 29 May 2019 07:22:21 GMT

←Older revision		Revision as of 07:22, 29 May 2019
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry~~ 4xbk is ~~ON HOLD until Paper Publication~~	+	==2-deoxyribose-5-phosphate aldolase from Lactobacillus brevis==
		+	<StructureSection load='4xbk' size='340' side='right'caption='[[4xbk]], [[Resolution\|resolution]] 1.95Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[4xbk]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactobacillus_brevis_atcc_14869 Lactobacillus brevis atcc 14869]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4XBK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4XBK FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">deoC, HMPREF0495_01319 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=649758 Lactobacillus brevis ATCC 14869])</td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Deoxyribose-phosphate_aldolase Deoxyribose-phosphate aldolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.2.4 4.1.2.4] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4xbk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4xbk OCA], [http://pdbe.org/4xbk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4xbk RCSB], [http://www.ebi.ac.uk/pdbsum/4xbk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4xbk ProSAT]</span></td></tr>
		+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/U2PI02_LACBR U2PI02_LACBR]] Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate.[HAMAP-Rule:MF_00114][SAAS:SAAS00678635]

-	~~Authors: Jiao, X.-C., Pan, J., Xu, G.-C., Kong, X.-D., Chen, Q., Zhang, Z.-J., Xu, J.-H.~~	+	==See Also==
-		+	*[[Aldolase 3D structures\|Aldolase 3D structures]]
-	~~Description: 2-deoxyribose-5-phosphate aldolase from Lactobacillus brevis~~	+	__TOC__
-	[[~~Category: Unreleased Structures~~]]	+	</StructureSection>
-	~~[[Category: Xu, G.-C]]~~	+	[[Category: Deoxyribose-phosphate aldolase]]
-	~~[[Category: Jiao, X.-C]]~~	+	[[Category: Lactobacillus brevis atcc 14869]]
-	[[Category: ~~Xu, J.~~-H]]	+	[[Category: Large Structures]]
-	[[Category: ~~Kong, X.-D~~]]	+
-	[[Category: ~~Zhang, Z.-J~~]]	+
	[[Category: Chen, Q]]		[[Category: Chen, Q]]
		+	[[Category: Jiao, X C]]
		+	[[Category: Kong, X D]]
	[[Category: Pan, J]]		[[Category: Pan, J]]
		+	[[Category: Xu, G C]]
		+	[[Category: Xu, J H]]
		+	[[Category: Zhang, Z J]]
		+	[[Category: Lyase]]

OCA at 07:59, 2 September 2015

OCA — Wed, 02 Sep 2015 07:59:47 GMT

←Older revision		Revision as of 07:59, 2 September 2015
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4xbk is ON HOLD	+	The entry 4xbk is ON HOLD until Paper Publication

	Authors: Jiao, X.-C., Pan, J., Xu, G.-C., Kong, X.-D., Chen, Q., Zhang, Z.-J., Xu, J.-H.		Authors: Jiao, X.-C., Pan, J., Xu, G.-C., Kong, X.-D., Chen, Q., Zhang, Z.-J., Xu, J.-H.

OCA at 20:49, 24 December 2014

OCA — Wed, 24 Dec 2014 20:49:17 GMT

←Older revision		Revision as of 20:49, 24 December 2014
Line 6:		Line 6:

	Description: 2-deoxyribose-5-phosphate aldolase from Lactobacillus brevis		Description: 2-deoxyribose-5-phosphate aldolase from Lactobacillus brevis
		+	[[Category: Unreleased Structures]]
		+	[[Category: Xu, G.-C]]
		+	[[Category: Jiao, X.-C]]
		+	[[Category: Xu, J.-H]]
		+	[[Category: Kong, X.-D]]
		+	[[Category: Zhang, Z.-J]]
		+	[[Category: Chen, Q]]
		+	[[Category: Pan, J]]

OCA: Protected "4xbk" [edit=sysop:move=sysop]

OCA — Wed, 24 Dec 2014 10:05:20 GMT

Protected "4xbk" [edit=sysop:move=sysop]

←Older revision

Revision as of 10:05, 24 December 2014

OCA: New page: '''Unreleased structure''' The entry 4xbk is ON HOLD Authors: Jiao, X.-C., Pan, J., Xu, G.-C., Kong, X.-D., Chen, Q., Zhang, Z.-J., Xu, J.-H. Description: 2-deoxyribose-5-phosphate ald...

OCA — Wed, 24 Dec 2014 10:05:19 GMT

New page: '''Unreleased structure''' The entry 4xbk is ON HOLD Authors: Jiao, X.-C., Pan, J., Xu, G.-C., Kong, X.-D., Chen, Q., Zhang, Z.-J., Xu, J.-H. Description: 2-deoxyribose-5-phosphate ald...

New page

'''Unreleased structure'''

The entry 4xbk is ON HOLD

Authors: Jiao, X.-C., Pan, J., Xu, G.-C., Kong, X.-D., Chen, Q., Zhang, Z.-J., Xu, J.-H.

Description: 2-deoxyribose-5-phosphate aldolase from Lactobacillus brevis