4y0e - Revision history

OCA at 07:52, 27 September 2023

OCA — Wed, 27 Sep 2023 07:52:55 GMT

←Older revision		Revision as of 07:52, 27 September 2023
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4y0e]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacteroides_abscessus_ATCC_19977 Mycobacteroides abscessus ATCC 19977]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Y0E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4Y0E FirstGlance]. <br>		<table><tr><td colspan='2'>[[4y0e]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacteroides_abscessus_ATCC_19977 Mycobacteroides abscessus ATCC 19977]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Y0E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4Y0E FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.9Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4y0e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4y0e OCA], [https://pdbe.org/4y0e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4y0e RCSB], [https://www.ebi.ac.uk/pdbsum/4y0e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4y0e ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4y0e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4y0e OCA], [https://pdbe.org/4y0e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4y0e RCSB], [https://www.ebi.ac.uk/pdbsum/4y0e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4y0e ProSAT]</span></td></tr>
	</table>		</table>

OCA at 18:00, 26 April 2023

OCA — Wed, 26 Apr 2023 18:00:57 GMT

←Older revision		Revision as of 18:00, 26 April 2023
Line 3:		Line 3:
	<StructureSection load='4y0e' size='340' side='right'caption='[[4y0e]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='4y0e' size='340' side='right'caption='[[4y0e]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4y0e]] is a 8 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Myca9 Myca9~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Y0E OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4Y0E FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4y0e]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacteroides_abscessus_ATCC_19977 Mycobacteroides abscessus ATCC 19977]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Y0E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4Y0E FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>~~</td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene></td></tr>
-	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">MAB_4209c ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=561007 MYCA9])~~</td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4y0e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4y0e OCA], [https://pdbe.org/4y0e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4y0e RCSB], [https://www.ebi.ac.uk/pdbsum/4y0e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4y0e ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4y0e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4y0e OCA], [~~http~~://pdbe.org/4y0e PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4y0e RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4y0e PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4y0e ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/B1MIR1_MYCA9 B1MIR1_MYCA9]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Myca9]]~~	+	[[Category: Mycobacteroides abscessus ATCC 19977]]
-	~~[[Category: Structural genomic]]~~	+
-	~~[[Category: Dioxygenase]]~~	+
-	~~[[Category: Mycobacterium~~ abscessus]]	+
-	~~[[Category: Oxidoreductase]]~~	+
-	~~[[Category: Ssgcid~~]]	+

OCA at 15:51, 11 December 2019

OCA — Wed, 11 Dec 2019 15:51:03 GMT

←Older revision		Revision as of 15:51, 11 December 2019
Line 3:		Line 3:
	<StructureSection load='4y0e' size='340' side='right'caption='[[4y0e]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='4y0e' size='340' side='right'caption='[[4y0e]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4y0e]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Y0E OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4Y0E FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4y0e]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Myca9 Myca9]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Y0E OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4Y0E FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">MAB_4209c ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=561007 MYCA9])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4y0e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4y0e OCA], [http://pdbe.org/4y0e PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4y0e RCSB], [http://www.ebi.ac.uk/pdbsum/4y0e PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4y0e ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4y0e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4y0e OCA], [http://pdbe.org/4y0e PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4y0e RCSB], [http://www.ebi.ac.uk/pdbsum/4y0e PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4y0e ProSAT]</span></td></tr>
	</table>		</table>
Line 10:		Line 11:
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
		+	[[Category: Myca9]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Dioxygenase]]		[[Category: Dioxygenase]]

OCA at 07:24, 10 July 2019

OCA — Wed, 10 Jul 2019 07:24:32 GMT

←Older revision		Revision as of 07:24, 10 July 2019
Line 1:		Line 1:

	==X-ray Crystal Structure of a putative dioxygenase from Mycobacterium abscessus==		==X-ray Crystal Structure of a putative dioxygenase from Mycobacterium abscessus==
-	<StructureSection load='4y0e' size='340' side='right' caption='[[4y0e]], [[Resolution\|resolution]] 1.90Å' scene=''>	+	<StructureSection load='4y0e' size='340' side='right'caption='[[4y0e]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4y0e]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Y0E OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4Y0E FirstGlance]. <br>		<table><tr><td colspan='2'>[[4y0e]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Y0E OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4Y0E FirstGlance]. <br>
Line 9:		Line 9:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Dioxygenase]]		[[Category: Dioxygenase]]

OCA at 06:11, 6 October 2017

OCA — Fri, 06 Oct 2017 06:11:49 GMT

←Older revision		Revision as of 06:11, 6 October 2017
Line 1:		Line 1:
		+
	==X-ray Crystal Structure of a putative dioxygenase from Mycobacterium abscessus==		==X-ray Crystal Structure of a putative dioxygenase from Mycobacterium abscessus==
	<StructureSection load='4y0e' size='340' side='right' caption='[[4y0e]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='4y0e' size='340' side='right' caption='[[4y0e]], [[Resolution\|resolution]] 1.90Å' scene=''>
Line 4:		Line 5:
	<table><tr><td colspan='2'>[[4y0e]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Y0E OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4Y0E FirstGlance]. <br>		<table><tr><td colspan='2'>[[4y0e]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Y0E OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4Y0E FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4y0e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4y0e OCA], [http://pdbe.org/4y0e PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4y0e RCSB], [http://www.ebi.ac.uk/pdbsum/4y0e PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4y0e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4y0e OCA], [http://pdbe.org/4y0e PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4y0e RCSB], [http://www.ebi.ac.uk/pdbsum/4y0e PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4y0e ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__

OCA at 04:42, 1 December 2015

OCA — Tue, 01 Dec 2015 04:42:39 GMT

←Older revision		Revision as of 04:42, 1 December 2015
Line 1:		Line 1:
-	'''~~Unreleased structure~~'''	+	==X-ray Crystal Structure of a putative dioxygenase from Mycobacterium abscessus==
-		+	<StructureSection load='4y0e' size='340' side='right' caption='[[4y0e]], [[Resolution\|resolution]] 1.90Å' scene=''>
-	~~The entry~~ 4y0e is ~~ON HOLD~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[4y0e]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Y0E OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4Y0E FirstGlance]. <br>
-	~~Authors~~: ~~Seattle Structural Genomics Center for Infectious Disease~~ (~~SSGCID~~)	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene></td></tr>
-		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4y0e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4y0e OCA], [http://pdbe.org/4y0e PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4y0e RCSB], [http://www.ebi.ac.uk/pdbsum/4y0e PDBsum]</span></td></tr>
-	~~Description~~: X-~~ray Crystal Structure of a putative dioxygenase from~~ Mycobacterium abscessus	+	</table>
-	[[Category: ~~Unreleased Structures~~]]	+	__TOC__
-	[[Category: ~~Seattle Structural Genomics Center For Infectious Disease (~~Ssgcid)]]	+	</StructureSection>
		+	[[Category: Structural genomic]]
		+	[[Category: Dioxygenase]]
		+	[[Category: Mycobacterium abscessus]]
		+	[[Category: Oxidoreductase]]
		+	[[Category: Ssgcid]]

OCA: Protected "4y0e" [edit=sysop:move=sysop]

OCA — Thu, 12 Feb 2015 10:57:28 GMT

Protected "4y0e" [edit=sysop:move=sysop]

←Older revision

Revision as of 10:57, 12 February 2015

OCA: New page: '''Unreleased structure''' The entry 4y0e is ON HOLD Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID) Description: X-ray Crystal Structure of a putative diox...

OCA — Thu, 12 Feb 2015 10:57:27 GMT

New page: '''Unreleased structure''' The entry 4y0e is ON HOLD Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID) Description: X-ray Crystal Structure of a putative diox...

New page

'''Unreleased structure'''

The entry 4y0e is ON HOLD

Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Description: X-ray Crystal Structure of a putative dioxygenase from Mycobacterium abscessus
[[Category: Unreleased Structures]]
[[Category: Seattle Structural Genomics Center For Infectious Disease (Ssgcid)]]