4ycc - Revision history

OCA at 07:56, 27 September 2023

OCA — Wed, 27 Sep 2023 07:56:36 GMT

←Older revision		Revision as of 07:56, 27 September 2023
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4ycc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Acetobacter_aceti_1023 Acetobacter aceti 1023]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YCC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4YCC FirstGlance]. <br>		<table><tr><td colspan='2'>[[4ycc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Acetobacter_aceti_1023 Acetobacter aceti 1023]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YCC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4YCC FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.257Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ycc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ycc OCA], [https://pdbe.org/4ycc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ycc RCSB], [https://www.ebi.ac.uk/pdbsum/4ycc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ycc ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ycc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ycc OCA], [https://pdbe.org/4ycc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ycc RCSB], [https://www.ebi.ac.uk/pdbsum/4ycc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ycc ProSAT]</span></td></tr>
	</table>		</table>

OCA at 08:08, 3 May 2023

OCA — Wed, 03 May 2023 08:08:18 GMT

←Older revision		Revision as of 08:08, 3 May 2023
Line 3:		Line 3:
	<StructureSection load='4ycc' size='340' side='right'caption='[[4ycc]], [[Resolution\|resolution]] 2.26Å' scene=''>		<StructureSection load='4ycc' size='340' side='right'caption='[[4ycc]], [[Resolution\|resolution]] 2.26Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4ycc]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Acetobacter_aceti_1023 Acetobacter aceti 1023]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YCC OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4YCC FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4ycc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Acetobacter_aceti_1023 Acetobacter aceti 1023]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YCC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4YCC FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene~~></td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	~~<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1u11\|1u11]], [[4ycb\|4ycb]], [[4ycd\|4ycd]], [[4ycj\|4ycj]]</td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ycc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ycc OCA], [https://pdbe.org/4ycc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ycc RCSB], [https://www.ebi.ac.uk/pdbsum/4ycc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ycc ProSAT]</span></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">purE, AZ09_02690 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1457393 Acetobacter aceti 1023])</td></tr>	+
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/5-(carboxyamino)imidazole_ribonucleotide_mutase 5-(carboxyamino)imidazole ribonucleotide mutase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.4.99.18 5.4.99.18] </span></td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4ycc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ycc OCA], [~~http~~://pdbe.org/4ycc PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4ycc RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4ycc PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4ycc ProSAT]</span></td></tr>	+
	</table>		</table>
-	== ~~Function~~ ==	+
-	[[~~http://www.uniprot.org/uniprot/A0A063X4U8_ACEAC A0A063X4U8_ACEAC~~]~~] Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).[HAMAP-Rule:MF_01929~~]	+	==See Also==
		+	*[[Phosphoribosylaminoimidazole carboxylase 3D structures\|Phosphoribosylaminoimidazole carboxylase 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Acetobacter aceti 1023]]		[[Category: Acetobacter aceti 1023]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Kappock~~, T J~~]]	+	[[Category: Kappock TJ]]
-	[[Category: Sullivan~~, K L]]~~	+	[[Category: Sullivan KL]]
-	~~[[Category: Acidophile]]~~	+
-	~~[[Category: Isomerase]]~~	+
-	~~[[Category: Pure]]~~	+
-	~~[[Category: Purine biosynthesis~~]]	+

OCA at 06:31, 12 June 2019

OCA — Wed, 12 Jun 2019 06:31:37 GMT

←Older revision		Revision as of 06:31, 12 June 2019
Line 1:		Line 1:

	==Structure of a single tryptophan mutant of Acetobacter aceti PurE with Y154L mutation==		==Structure of a single tryptophan mutant of Acetobacter aceti PurE with Y154L mutation==
-	<StructureSection load='4ycc' size='340' side='right' caption='[[4ycc]], [[Resolution\|resolution]] 2.26Å' scene=''>	+	<StructureSection load='4ycc' size='340' side='right'caption='[[4ycc]], [[Resolution\|resolution]] 2.26Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4ycc]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YCC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4YCC FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4ycc]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Acetobacter_aceti_1023 Acetobacter aceti 1023]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YCC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4YCC FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1u11\|1u11]], [[4ycb\|4ycb]], [[4ycd\|4ycd]], [[4ycj\|4ycj]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1u11\|1u11]], [[4ycb\|4ycb]], [[4ycd\|4ycd]], [[4ycj\|4ycj]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">purE, AZ09_02690 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1457393 Acetobacter aceti 1023])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/5-(carboxyamino)imidazole_ribonucleotide_mutase 5-(carboxyamino)imidazole ribonucleotide mutase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.4.99.18 5.4.99.18] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/5-(carboxyamino)imidazole_ribonucleotide_mutase 5-(carboxyamino)imidazole ribonucleotide mutase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.4.99.18 5.4.99.18] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ycc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ycc OCA], [http://pdbe.org/4ycc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ycc RCSB], [http://www.ebi.ac.uk/pdbsum/4ycc PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ycc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ycc OCA], [http://pdbe.org/4ycc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ycc RCSB], [http://www.ebi.ac.uk/pdbsum/4ycc PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ycc ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 13:		Line 14:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Acetobacter aceti 1023]]
		+	[[Category: Large Structures]]
	[[Category: Kappock, T J]]		[[Category: Kappock, T J]]
	[[Category: Sullivan, K L]]		[[Category: Sullivan, K L]]

OCA at 07:28, 1 June 2016

OCA — Wed, 01 Jun 2016 07:28:05 GMT

←Older revision		Revision as of 07:28, 1 June 2016
Line 1:		Line 1:

-	==Structure of a single tryptophan mutant of Acetobacter aceti PurE with ~~Y514L~~ mutation==	+	==Structure of a single tryptophan mutant of Acetobacter aceti PurE with Y154L mutation==
	<StructureSection load='4ycc' size='340' side='right' caption='[[4ycc]], [[Resolution\|resolution]] 2.26Å' scene=''>		<StructureSection load='4ycc' size='340' side='right' caption='[[4ycc]], [[Resolution\|resolution]] 2.26Å' scene=''>
	== Structural highlights ==		== Structural highlights ==

OCA at 18:15, 26 February 2016

OCA — Fri, 26 Feb 2016 18:15:30 GMT

←Older revision		Revision as of 18:15, 26 February 2016
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry~~ 4ycc is ~~ON HOLD until Feb 24 2017~~	+	==Structure of a single tryptophan mutant of Acetobacter aceti PurE with Y514L mutation==
-		+	<StructureSection load='4ycc' size='340' side='right' caption='[[4ycc]], [[Resolution\|resolution]] 2.26Å' scene=''>
-	~~Authors~~: ~~Kappock~~, T.J., ~~Sullivan~~, K.L.	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[4ycc]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YCC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4YCC FirstGlance]. <br>
-	~~Description~~:	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1u11\|1u11]], [[4ycb\|4ycb]], [[4ycd\|4ycd]], [[4ycj\|4ycj]]</td></tr>
-	[[Category: Sullivan, K.L]]	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/5-(carboxyamino)imidazole_ribonucleotide_mutase 5-(carboxyamino)imidazole ribonucleotide mutase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.4.99.18 5.4.99.18] </span></td></tr>
-	[[Category: ~~Kappock, T.J~~]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ycc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ycc OCA], [http://pdbe.org/4ycc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ycc RCSB], [http://www.ebi.ac.uk/pdbsum/4ycc PDBsum]</span></td></tr>
		+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/A0A063X4U8_ACEAC A0A063X4U8_ACEAC]] Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).[HAMAP-Rule:MF_01929]
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Kappock, T J]]
		+	[[Category: Sullivan, K L]]
		+	[[Category: Acidophile]]
		+	[[Category: Isomerase]]
		+	[[Category: Pure]]
		+	[[Category: Purine biosynthesis]]

OCA at 13:40, 13 January 2016

OCA — Wed, 13 Jan 2016 13:40:48 GMT

←Older revision		Revision as of 13:40, 13 January 2016
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4ycc is ON HOLD until ~~Paper Publication~~	+	The entry 4ycc is ON HOLD until Feb 24 2017

	Authors: Kappock, T.J., Sullivan, K.L.		Authors: Kappock, T.J., Sullivan, K.L.

OCA at 10:12, 15 July 2015

OCA — Wed, 15 Jul 2015 10:12:33 GMT

←Older revision		Revision as of 10:12, 15 July 2015
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4ycc is ON HOLD	+	The entry 4ycc is ON HOLD until Paper Publication

	Authors: Kappock, T.J., Sullivan, K.L.		Authors: Kappock, T.J., Sullivan, K.L.

OCA at 11:39, 8 July 2015

OCA — Wed, 08 Jul 2015 11:39:21 GMT

←Older revision		Revision as of 11:39, 8 July 2015
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4ycc is ON HOLD ~~until Paper Publication~~	+	The entry 4ycc is ON HOLD

	Authors: Kappock, T.J., Sullivan, K.L.		Authors: Kappock, T.J., Sullivan, K.L.

OCA at 10:44, 6 May 2015

OCA — Wed, 06 May 2015 10:44:58 GMT

←Older revision		Revision as of 10:44, 6 May 2015
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4ycc is ON HOLD	+	The entry 4ycc is ON HOLD until Paper Publication

	Authors: Kappock, T.J., Sullivan, K.L.		Authors: Kappock, T.J., Sullivan, K.L.

OCA at 09:16, 30 April 2015

OCA — Thu, 30 Apr 2015 09:16:22 GMT

←Older revision		Revision as of 09:16, 30 April 2015
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4ycc is ON HOLD ~~until Paper Publication~~	+	The entry 4ycc is ON HOLD

	Authors: Kappock, T.J., Sullivan, K.L.		Authors: Kappock, T.J., Sullivan, K.L.