4zb9 - Revision history

OCA at 10:58, 10 January 2024

OCA — Wed, 10 Jan 2024 10:58:52 GMT

←Older revision		Revision as of 10:58, 10 January 2024
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4zb9]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Phanerodontia_chrysosporium Phanerodontia chrysosporium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ZB9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4ZB9 FirstGlance]. <br>		<table><tr><td colspan='2'>[[4zb9]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Phanerodontia_chrysosporium Phanerodontia chrysosporium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ZB9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4ZB9 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GDS:OXIDIZED+GLUTATHIONE+DISULFIDE'>GDS</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.403Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GDS:OXIDIZED+GLUTATHIONE+DISULFIDE'>GDS</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4zb9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4zb9 OCA], [https://pdbe.org/4zb9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4zb9 RCSB], [https://www.ebi.ac.uk/pdbsum/4zb9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4zb9 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4zb9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4zb9 OCA], [https://pdbe.org/4zb9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4zb9 RCSB], [https://www.ebi.ac.uk/pdbsum/4zb9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4zb9 ProSAT]</span></td></tr>
	</table>		</table>

OCA at 07:47, 10 May 2023

OCA — Wed, 10 May 2023 07:47:40 GMT

←Older revision		Revision as of 07:47, 10 May 2023
Line 3:		Line 3:
	<StructureSection load='4zb9' size='340' side='right'caption='[[4zb9]], [[Resolution\|resolution]] 2.40Å' scene=''>		<StructureSection load='4zb9' size='340' side='right'caption='[[4zb9]], [[Resolution\|resolution]] 2.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4zb9]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Chrysosporium_pruinosum_(gilman_&_abbott)_carmich. Chrysosporium pruinosum (gilman & abbott) carmich.~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ZB9 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4ZB9 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4zb9]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Phanerodontia_chrysosporium Phanerodontia chrysosporium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ZB9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4ZB9 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GDS:OXIDIZED+GLUTATHIONE+DISULFIDE'>GDS</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GDS:OXIDIZED+GLUTATHIONE+DISULFIDE'>GDS</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4zb9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4zb9 OCA], [~~http~~://pdbe.org/4zb9 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4zb9 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4zb9 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4zb9 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4zb9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4zb9 OCA], [https://pdbe.org/4zb9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4zb9 RCSB], [https://www.ebi.ac.uk/pdbsum/4zb9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4zb9 ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/A0A0R4I985_PHACH A0A0R4I985_PHACH]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
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	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Didierjean, C~~]]	+	[[Category: Phanerodontia chrysosporium]]
-	[[Category: ~~Roret, T~~]]	+	[[Category: Didierjean C]]
-	[[Category: ~~Glutathione transferase]]~~	+	[[Category: Roret T]]
-	~~[[Category: Gst fold]]~~	+
-	~~[[Category: Oxidized glutathione]]~~	+
-	~~[[Category: Transferase~~]]	+

OCA at 07:26, 19 June 2019

OCA — Wed, 19 Jun 2019 07:26:19 GMT

←Older revision		Revision as of 07:26, 19 June 2019
Line 1:		Line 1:
		+
	==Crystal structure of the glutathione transferase URE2P8 from Phanerochaete chrysosporium, with one glutathione disulfide bound per dimer.==		==Crystal structure of the glutathione transferase URE2P8 from Phanerochaete chrysosporium, with one glutathione disulfide bound per dimer.==
-	<StructureSection load='4zb9' size='340' side='right' caption='[[4zb9]], [[Resolution\|resolution]] 2.40Å' scene=''>	+	<StructureSection load='4zb9' size='340' side='right'caption='[[4zb9]], [[Resolution\|resolution]] 2.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4zb9]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ZB9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ZB9 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4zb9]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Chrysosporium_pruinosum_(gilman_&_abbott)_carmich. Chrysosporium pruinosum (gilman & abbott) carmich.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ZB9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ZB9 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GDS:OXIDIZED+GLUTATHIONE+DISULFIDE'>GDS</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GDS:OXIDIZED+GLUTATHIONE+DISULFIDE'>GDS</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4zb9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4zb9 OCA], [http://pdbe.org/4zb9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4zb9 RCSB], [http://www.ebi.ac.uk/pdbsum/4zb9 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4zb9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4zb9 OCA], [http://pdbe.org/4zb9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4zb9 RCSB], [http://www.ebi.ac.uk/pdbsum/4zb9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4zb9 ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 19:		Line 20:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Didierjean, C]]		[[Category: Didierjean, C]]
	[[Category: Roret, T]]		[[Category: Roret, T]]

OCA at 14:37, 30 September 2015

OCA — Wed, 30 Sep 2015 14:37:05 GMT

←Older revision		Revision as of 14:37, 30 September 2015
Line 1:		Line 1:
-	'''~~Unreleased~~ structure'''	+	==Crystal structure of the glutathione transferase URE2P8 from Phanerochaete chrysosporium, with one glutathione disulfide bound per dimer.==
		+	<StructureSection load='4zb9' size='340' side='right' caption='[[4zb9]], [[Resolution\|resolution]] 2.40Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[4zb9]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ZB9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ZB9 FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GDS:OXIDIZED+GLUTATHIONE+DISULFIDE'>GDS</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4zb9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4zb9 OCA], [http://pdbe.org/4zb9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4zb9 RCSB], [http://www.ebi.ac.uk/pdbsum/4zb9 PDBsum]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The intracellular systems of detoxification are crucial for the survival of wood degrading fungi. Within these systems, glutathione transferases could play a major role since this family of enzymes is specifically extended in lignolytic fungi. In particular the Ure2p class represents one third of the total GST number in Phanerochaete chrysosporium. These proteins have been phylogenetically split into two subclasses called Ure2pA and Ure2pB. Ure2pB can be classified as Nu GSTs because of shared structural and functional features with previously characterized bacterial isoforms. Ure2pA can rather be qualified as Nu-like GSTs since they exhibit a number of differences. Ure2pA possess a classical transferase activity, a more divergent catalytic site and a higher structural flexibility for some of them, compared to Nu GSTs. The characterization of four members of this Ure2pA subclass (PcUre2pA4, PcUre2pA5, PcUre2pA6 and PcUre2pA8) revealed specific functional and structural features, suggesting that these enzymes have rapidly evolved and differentiated, probably to adapt to the complex chemical environment associated with wood decomposition.

-	~~The entry 4zb9 is ON HOLD until Paper Publication~~	+	Evolutionary divergence of Ure2pA glutathione transferases in wood degrading fungi.,Roret T, Thuillier A, Favier F, Gelhaye E, Didierjean C, Morel-Rouhier M Fungal Genet Biol. 2015 Oct;83:103-12. doi: 10.1016/j.fgb.2015.09.002. Epub 2015 , Sep 5. PMID:26348000<ref>PMID:26348000</ref>

-	~~Authors: Roret~~, T.~~, Didierjean, C~~.	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~Description~~: ~~Crystal structure of the glutathione transferase URE2P8 from Phanerochaete chrysosporium, with one glutathione disulfide bound per dimer.~~	+	<div class="pdbe-citations 4zb9" style="background-color:#fffaf0;"></div>
-	~~[[Category: Unreleased Structures]]~~	+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
	[[Category: Didierjean, C]]		[[Category: Didierjean, C]]
	[[Category: Roret, T]]		[[Category: Roret, T]]
		+	[[Category: Glutathione transferase]]
		+	[[Category: Gst fold]]
		+	[[Category: Oxidized glutathione]]
		+	[[Category: Transferase]]

OCA at 10:09, 30 April 2015

OCA — Thu, 30 Apr 2015 10:09:14 GMT

←Older revision		Revision as of 10:09, 30 April 2015
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4zb9 is ON HOLD	+	The entry 4zb9 is ON HOLD until Paper Publication

	Authors: Roret, T., Didierjean, C.		Authors: Roret, T., Didierjean, C.

OCA: Protected "4zb9" [edit=sysop:move=sysop]

OCA — Wed, 22 Apr 2015 11:40:17 GMT

Protected "4zb9" [edit=sysop:move=sysop]

←Older revision

Revision as of 11:40, 22 April 2015

OCA: New page: '''Unreleased structure''' The entry 4zb9 is ON HOLD Authors: Roret, T., Didierjean, C. Description: Crystal structure of the glutathione transferase URE2P8 from Phanerochaete chrysosp...

OCA — Wed, 22 Apr 2015 11:40:15 GMT

New page: '''Unreleased structure''' The entry 4zb9 is ON HOLD Authors: Roret, T., Didierjean, C. Description: Crystal structure of the glutathione transferase URE2P8 from Phanerochaete chrysosp...

New page

'''Unreleased structure'''

The entry 4zb9 is ON HOLD

Authors: Roret, T., Didierjean, C.

Description: Crystal structure of the glutathione transferase URE2P8 from Phanerochaete chrysosporium, with one glutathione disulfide bound per dimer.
[[Category: Unreleased Structures]]
[[Category: Didierjean, C]]
[[Category: Roret, T]]