5a4n - Revision history

OCA at 11:03, 10 January 2024

OCA — Wed, 10 Jan 2024 11:03:48 GMT

←Older revision		Revision as of 11:03, 10 January 2024
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[5a4n]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Burkholderia_pseudomallei_K96243 Burkholderia pseudomallei K96243]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5A4N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5A4N FirstGlance]. <br>		<table><tr><td colspan='2'>[[5a4n]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Burkholderia_pseudomallei_K96243 Burkholderia pseudomallei K96243]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5A4N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5A4N FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.96Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5a4n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5a4n OCA], [https://pdbe.org/5a4n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5a4n RCSB], [https://www.ebi.ac.uk/pdbsum/5a4n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5a4n ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5a4n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5a4n OCA], [https://pdbe.org/5a4n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5a4n RCSB], [https://www.ebi.ac.uk/pdbsum/5a4n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5a4n ProSAT]</span></td></tr>
	</table>		</table>

OCA at 04:39, 25 May 2023

OCA — Thu, 25 May 2023 04:39:14 GMT

←Older revision		Revision as of 04:39, 25 May 2023
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	<StructureSection load='5a4n' size='340' side='right'caption='[[5a4n]], [[Resolution\|resolution]] 1.96Å' scene=''>		<StructureSection load='5a4n' size='340' side='right'caption='[[5a4n]], [[Resolution\|resolution]] 1.96Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5a4n]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Burps Burps~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5A4N OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5A4N FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5a4n]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Burkholderia_pseudomallei_K96243 Burkholderia pseudomallei K96243]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5A4N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5A4N FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>~~</td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
-	~~<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5a4o\|5a4o]]~~</td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5a4n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5a4n OCA], [https://pdbe.org/5a4n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5a4n RCSB], [https://www.ebi.ac.uk/pdbsum/5a4n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5a4n ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5a4n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5a4n OCA], [~~http~~://pdbe.org/5a4n PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5a4n RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5a4n PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5a4n ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q63VU8_BURPS Q63VU8_BURPS]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Burps~~]]	+	[[Category: Burkholderia pseudomallei K96243]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Bayer, N]]	+	[[Category: Bayer N]]
-	[[Category: Hinrichs, W]]	+	[[Category: Hinrichs W]]
-	[[Category: Werten, S]]	+	[[Category: Werten S]]
-	~~[[Category: Dna binding protein]]~~	+
-	~~[[Category: Dna replication]]~~	+
-	~~[[Category: Dna-binding protein]]~~	+
-	~~[[Category: Recombination and repair]]~~	+
-	~~[[Category: Transcription~~]]	+

OCA at 12:55, 10 May 2019

OCA — Fri, 10 May 2019 12:55:55 GMT

←Older revision		Revision as of 12:55, 10 May 2019
Line 1:		Line 1:

	==Crystal structure of BPSL1147, a PC4 homolog from Burkholderia pseudomallei K96243 (tetragonal crystal form)==		==Crystal structure of BPSL1147, a PC4 homolog from Burkholderia pseudomallei K96243 (tetragonal crystal form)==
-	<StructureSection load='5a4n' size='340' side='right' caption='[[5a4n]], [[Resolution\|resolution]] 1.96Å' scene=''>	+	<StructureSection load='5a4n' size='340' side='right'caption='[[5a4n]], [[Resolution\|resolution]] 1.96Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5a4n]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5A4N OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5A4N FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5a4n]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Burps Burps]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5A4N OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5A4N FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5a4o\|5a4o]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5a4o\|5a4o]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5a4n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5a4n OCA], [http://pdbe.org/5a4n PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5a4n RCSB], [http://www.ebi.ac.uk/pdbsum/5a4n PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5a4n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5a4n OCA], [http://pdbe.org/5a4n PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5a4n RCSB], [http://www.ebi.ac.uk/pdbsum/5a4n PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5a4n ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 21:		Line 21:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Burps]]
		+	[[Category: Large Structures]]
	[[Category: Bayer, N]]		[[Category: Bayer, N]]
	[[Category: Hinrichs, W]]		[[Category: Hinrichs, W]]
	[[Category: Werten, S]]		[[Category: Werten, S]]
		+	[[Category: Dna binding protein]]
	[[Category: Dna replication]]		[[Category: Dna replication]]
	[[Category: Dna-binding protein]]		[[Category: Dna-binding protein]]
	[[Category: Recombination and repair]]		[[Category: Recombination and repair]]
	[[Category: Transcription]]		[[Category: Transcription]]

OCA at 04:04, 12 May 2016

OCA — Thu, 12 May 2016 04:04:15 GMT

←Older revision		Revision as of 04:04, 12 May 2016
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry~~ 5a4n is ~~ON HOLD until Paper~~ Publication	+	==Crystal structure of BPSL1147, a PC4 homolog from Burkholderia pseudomallei K96243 (tetragonal crystal form)==
		+	<StructureSection load='5a4n' size='340' side='right' caption='[[5a4n]], [[Resolution\|resolution]] 1.96Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[5a4n]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5A4N OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5A4N FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5a4o\|5a4o]]</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5a4n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5a4n OCA], [http://pdbe.org/5a4n PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5a4n RCSB], [http://www.ebi.ac.uk/pdbsum/5a4n PDBsum]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Homologs of the eukaryotic transcription coactivator PC4, which also functions in DNA repair and oxidative stress, were recently identified in prokaryotes. Crystallographic analysis of BPSL1147, a putative homolog from the pathogen Burkholderia pseudomallei K96243, reveals a highly conserved core structure and suggests a nucleic acid binding mode similar to that of PC4. Knock-out and complementation experiments do not reveal distinguishing phenotypes under normal growth conditions or in the presence of H2O2, arguing against a critical role in repair or the oxidative stress response of Burkholderia. These results may reflect redundancy or point at a bacteriophage origin of Burkholderia PC4 homologs.

-	~~Authors: Werten~~, S., Bayer, N., Hinrichs, W.	+	Structural analysis and knock-out of a Burkholderia pseudomallei homolog of the eukaryotic transcription coactivator PC4.,Werten S, Kohler C, Bayer NJ, Steinmetz I, Hinrichs W Gene. 2016 Feb 15;577(2):140-7. doi: 10.1016/j.gene.2015.11.037. Epub 2015 Nov, 25. PMID:26625975<ref>PMID:26625975</ref>

-	~~Description: Crystal structure of BPSL1147~~, a ~~PC4 homolog from Burkholderia pseudomallei K96243 (tetragonal crystal form)~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	[[Category: ~~Unreleased Structures~~]]	+	</div>
		+	<div class="pdbe-citations 5a4n" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Bayer, N]]
	[[Category: Hinrichs, W]]		[[Category: Hinrichs, W]]
	[[Category: Werten, S]]		[[Category: Werten, S]]
-	[[Category: ~~Bayer, N~~]]	+	[[Category: Dna replication]]
		+	[[Category: Dna-binding protein]]
		+	[[Category: Recombination and repair]]
		+	[[Category: Transcription]]

OCA at 00:19, 1 December 2015

OCA — Tue, 01 Dec 2015 00:19:50 GMT

←Older revision		Revision as of 00:19, 1 December 2015
Line 8:		Line 8:
	[[Category: Unreleased Structures]]		[[Category: Unreleased Structures]]
	[[Category: Hinrichs, W]]		[[Category: Hinrichs, W]]
-	[[Category: Bayer, N]]
	[[Category: Werten, S]]		[[Category: Werten, S]]
		+	[[Category: Bayer, N]]

OCA at 13:01, 8 July 2015

OCA — Wed, 08 Jul 2015 13:01:15 GMT

←Older revision		Revision as of 13:01, 8 July 2015
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 5a4n is ON HOLD	+	The entry 5a4n is ON HOLD until Paper Publication

	Authors: Werten, S., Bayer, N., Hinrichs, W.		Authors: Werten, S., Bayer, N., Hinrichs, W.

OCA: Protected "5a4n" [edit=sysop:move=sysop]

OCA — Wed, 17 Jun 2015 13:32:32 GMT

Protected "5a4n" [edit=sysop:move=sysop]

←Older revision

Revision as of 13:32, 17 June 2015

OCA: New page: '''Unreleased structure''' The entry 5a4n is ON HOLD Authors: Werten, S., Bayer, N., Hinrichs, W. Description: Crystal structure of BPSL1147, a PC4 homolog from Burkholderia pseudomall...

OCA — Wed, 17 Jun 2015 13:32:31 GMT

New page: '''Unreleased structure''' The entry 5a4n is ON HOLD Authors: Werten, S., Bayer, N., Hinrichs, W. Description: Crystal structure of BPSL1147, a PC4 homolog from Burkholderia pseudomall...

New page

'''Unreleased structure'''

The entry 5a4n is ON HOLD

Authors: Werten, S., Bayer, N., Hinrichs, W.

Description: Crystal structure of BPSL1147, a PC4 homolog from Burkholderia pseudomallei K96243 (tetragonal crystal form)
[[Category: Unreleased Structures]]
[[Category: Hinrichs, W]]
[[Category: Bayer, N]]
[[Category: Werten, S]]