5buc - Revision history

OCA at 08:30, 27 September 2023

OCA — Wed, 27 Sep 2023 08:30:21 GMT

←Older revision		Revision as of 08:30, 27 September 2023
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[5buc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5BUC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5BUC FirstGlance]. <br>		<table><tr><td colspan='2'>[[5buc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5BUC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5BUC FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ET:ETHIDIUM'>ET</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.867Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ET:ETHIDIUM'>ET</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5buc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5buc OCA], [https://pdbe.org/5buc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5buc RCSB], [https://www.ebi.ac.uk/pdbsum/5buc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5buc ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5buc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5buc OCA], [https://pdbe.org/5buc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5buc RCSB], [https://www.ebi.ac.uk/pdbsum/5buc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5buc ProSAT]</span></td></tr>
	</table>		</table>

OCA at 06:08, 7 June 2023

OCA — Wed, 07 Jun 2023 06:08:30 GMT

←Older revision		Revision as of 06:08, 7 June 2023
Line 1:		Line 1:

	==Oxidized quinone reductase 2 in complex with ethidium==		==Oxidized quinone reductase 2 in complex with ethidium==
-	<StructureSection load='5buc' size='340' side='right' caption='[[5buc]], [[Resolution\|resolution]] 1.87Å' scene=''>	+	<StructureSection load='5buc' size='340' side='right'caption='[[5buc]], [[Resolution\|resolution]] 1.87Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5buc]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Human Human~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5BUC OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5BUC FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5buc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5BUC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5BUC FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ET:ETHIDIUM'>ET</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene~~></td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ET:ETHIDIUM'>ET</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NQO2, NMOR2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5buc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5buc OCA], [https://pdbe.org/5buc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5buc RCSB], [https://www.ebi.ac.uk/pdbsum/5buc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5buc ProSAT]</span></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribosyldihydronicotinamide_dehydrogenase_(quinone) Ribosyldihydronicotinamide dehydrogenase (quinone)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.10.99.2 1.10.99.2] </span></td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5buc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5buc OCA], [~~http~~://pdbe.org/5buc PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5buc RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5buc PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5buc ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/NQO2_HUMAN NQO2_HUMAN]] The enzyme apparently serves as a quinone reductase in connection with conjugation reactions of hydroquinones involved in detoxification pathways as well as in biosynthetic processes such as the vitamin K-dependent gamma-carboxylation of glutamate residues in prothrombin synthesis.<ref>PMID:18254726</ref>	+	[https://www.uniprot.org/uniprot/NQO2_HUMAN NQO2_HUMAN] The enzyme apparently serves as a quinone reductase in connection with conjugation reactions of hydroquinones involved in detoxification pathways as well as in biosynthetic processes such as the vitamin K-dependent gamma-carboxylation of glutamate residues in prothrombin synthesis.<ref>PMID:18254726</ref>
		+
		+	==See Also==
		+	*[[Quinone reductase\|Quinone reductase]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Human~~]]	+	[[Category: Homo sapiens]]
-	[[Category: ~~Leung, K K~~]]	+	[[Category: Large Structures]]
-	[[Category: ~~Shilton, B H~~]]	+	[[Category: Leung KK]]
-	[[Category: ~~Oxidoreductase-oxidoreductase inhibitor complex]]~~	+	[[Category: Shilton BH]]
-	~~[[Category: Quinone reductase 2~~]]	+

OCA at 09:47, 22 November 2017

OCA — Wed, 22 Nov 2017 09:47:35 GMT

←Older revision		Revision as of 09:47, 22 November 2017
Line 3:		Line 3:
	<StructureSection load='5buc' size='340' side='right' caption='[[5buc]], [[Resolution\|resolution]] 1.87Å' scene=''>		<StructureSection load='5buc' size='340' side='right' caption='[[5buc]], [[Resolution\|resolution]] 1.87Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5buc]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5BUC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5BUC FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5buc]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5BUC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5BUC FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ET:ETHIDIUM'>ET</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ET:ETHIDIUM'>ET</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NQO2, NMOR2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribosyldihydronicotinamide_dehydrogenase_(quinone) Ribosyldihydronicotinamide dehydrogenase (quinone)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.10.99.2 1.10.99.2] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribosyldihydronicotinamide_dehydrogenase_(quinone) Ribosyldihydronicotinamide dehydrogenase (quinone)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.10.99.2 1.10.99.2] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5buc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5buc OCA], [http://pdbe.org/5buc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5buc RCSB], [http://www.ebi.ac.uk/pdbsum/5buc PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5buc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5buc OCA], [http://pdbe.org/5buc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5buc RCSB], [http://www.ebi.ac.uk/pdbsum/5buc PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5buc ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 14:		Line 15:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Human]]
	[[Category: Leung, K K]]		[[Category: Leung, K K]]
	[[Category: Shilton, B H]]		[[Category: Shilton, B H]]
	[[Category: Oxidoreductase-oxidoreductase inhibitor complex]]		[[Category: Oxidoreductase-oxidoreductase inhibitor complex]]
	[[Category: Quinone reductase 2]]		[[Category: Quinone reductase 2]]

OCA at 22:22, 20 June 2016

OCA — Mon, 20 Jun 2016 22:22:14 GMT

←Older revision		Revision as of 22:22, 20 June 2016
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry~~ 5buc is ~~ON HOLD until Paper Publication~~	+	==Oxidized quinone reductase 2 in complex with ethidium==
-		+	<StructureSection load='5buc' size='340' side='right' caption='[[5buc]], [[Resolution\|resolution]] 1.87Å' scene=''>
-	~~Authors~~: ~~Leung~~, K.K., ~~Shilton~~, B.H.	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[5buc]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5BUC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5BUC FirstGlance]. <br>
-	~~Description: Oxidized quinone reductase 2 in complex with ethidium~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ET:ETHIDIUM'>ET</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	[[~~Category~~: ~~Unreleased Structures~~]]	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribosyldihydronicotinamide_dehydrogenase_(quinone) Ribosyldihydronicotinamide dehydrogenase (quinone)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.10.99.2 1.10.99.2] </span></td></tr>
-	[[Category: Leung, K.K]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5buc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5buc OCA], [http://pdbe.org/5buc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5buc RCSB], [http://www.ebi.ac.uk/pdbsum/5buc PDBsum]</span></td></tr>
-	[[Category: Shilton, B.H]]	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/NQO2_HUMAN NQO2_HUMAN]] The enzyme apparently serves as a quinone reductase in connection with conjugation reactions of hydroquinones involved in detoxification pathways as well as in biosynthetic processes such as the vitamin K-dependent gamma-carboxylation of glutamate residues in prothrombin synthesis.<ref>PMID:18254726</ref>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Leung, K K]]
		+	[[Category: Shilton, B H]]
		+	[[Category: Oxidoreductase-oxidoreductase inhibitor complex]]
		+	[[Category: Quinone reductase 2]]

OCA at 13:54, 17 June 2015

OCA — Wed, 17 Jun 2015 13:54:25 GMT

←Older revision		Revision as of 13:54, 17 June 2015
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 5buc is ON HOLD	+	The entry 5buc is ON HOLD until Paper Publication

	Authors: Leung, K.K., Shilton, B.H.		Authors: Leung, K.K., Shilton, B.H.

OCA: Protected "5buc" [edit=sysop:move=sysop]

OCA — Wed, 10 Jun 2015 13:04:34 GMT

Protected "5buc" [edit=sysop:move=sysop]

←Older revision

Revision as of 13:04, 10 June 2015

OCA: New page: '''Unreleased structure''' The entry 5buc is ON HOLD Authors: Leung, K.K., Shilton, B.H. Description: Oxidized quinone reductase 2 in complex with ethidium [[Category: Unreleased Struc...

OCA — Wed, 10 Jun 2015 13:04:33 GMT

New page: '''Unreleased structure''' The entry 5buc is ON HOLD Authors: Leung, K.K., Shilton, B.H. Description: Oxidized quinone reductase 2 in complex with ethidium [[Category: Unreleased Struc...

New page

'''Unreleased structure'''

The entry 5buc is ON HOLD

Authors: Leung, K.K., Shilton, B.H.

Description: Oxidized quinone reductase 2 in complex with ethidium
[[Category: Unreleased Structures]]
[[Category: Leung, K.K]]
[[Category: Shilton, B.H]]