5c5w - Revision history

OCA at 11:44, 9 May 2024

OCA — Thu, 09 May 2024 11:44:37 GMT

←Older revision		Revision as of 11:44, 9 May 2024
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[5c5w]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces Saccharomyces]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5C5W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5C5W FirstGlance]. <br>		<table><tr><td colspan='2'>[[5c5w]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces Saccharomyces]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5C5W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5C5W FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5c5w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5c5w OCA], [https://pdbe.org/5c5w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5c5w RCSB], [https://www.ebi.ac.uk/pdbsum/5c5w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5c5w ProSAT]</span></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.25Å</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5c5w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5c5w OCA], [https://pdbe.org/5c5w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5c5w RCSB], [https://www.ebi.ac.uk/pdbsum/5c5w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5c5w ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 06:21, 7 June 2023

OCA — Wed, 07 Jun 2023 06:21:09 GMT

←Older revision		Revision as of 06:21, 7 June 2023
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	<StructureSection load='5c5w' size='340' side='right'caption='[[5c5w]], [[Resolution\|resolution]] 1.25Å' scene=''>		<StructureSection load='5c5w' size='340' side='right'caption='[[5c5w]], [[Resolution\|resolution]] 1.25Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5c5w]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5C5W OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5C5W FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5c5w]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces Saccharomyces]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5C5W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5C5W FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5c5w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5c5w OCA], [~~http~~://pdbe.org/5c5w PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5c5w RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5c5w PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5c5w ProSAT]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5c5w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5c5w OCA], [https://pdbe.org/5c5w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5c5w RCSB], [https://www.ebi.ac.uk/pdbsum/5c5w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5c5w ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
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	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Stewart, M~~]]	+	[[Category: Saccharomyces]]
-	[[Category: ~~Valkov, E~~]]	+	[[Category: Stewart M]]
-	[[Category: ~~A-c]]~~	+	[[Category: Valkov E]]
-	~~[[Category: C-c]]~~	+
-	~~[[Category: Duplex]]~~	+
-	~~[[Category: G-u base pairing]]~~	+
-	~~[[Category: Rna~~]]	+

OCA at 11:13, 18 March 2020

OCA — Wed, 18 Mar 2020 11:13:28 GMT

←Older revision		Revision as of 11:13, 18 March 2020
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	==1.25 A resolution structure of an RNA 20-mer==		==1.25 A resolution structure of an RNA 20-mer==
-	<StructureSection load='5c5w' size='340' side='right' caption='[[5c5w]], [[Resolution\|resolution]] 1.25Å' scene=''>	+	<StructureSection load='5c5w' size='340' side='right'caption='[[5c5w]], [[Resolution\|resolution]] 1.25Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[5c5w]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5C5W OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5C5W FirstGlance]. <br>		<table><tr><td colspan='2'>[[5c5w]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5C5W OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5C5W FirstGlance]. <br>
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Stewart, M]]		[[Category: Stewart, M]]
	[[Category: Valkov, E]]		[[Category: Valkov, E]]

OCA at 10:26, 13 September 2017

OCA — Wed, 13 Sep 2017 10:26:47 GMT

←Older revision		Revision as of 10:26, 13 September 2017
Line 1:		Line 1:
		+
	==1.25 A resolution structure of an RNA 20-mer==		==1.25 A resolution structure of an RNA 20-mer==
	<StructureSection load='5c5w' size='340' side='right' caption='[[5c5w]], [[Resolution\|resolution]] 1.25Å' scene=''>		<StructureSection load='5c5w' size='340' side='right' caption='[[5c5w]], [[Resolution\|resolution]] 1.25Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[5c5w]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5C5W OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5C5W FirstGlance]. <br>		<table><tr><td colspan='2'>[[5c5w]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5C5W OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5C5W FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5c5w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5c5w OCA], [http://pdbe.org/5c5w PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5c5w RCSB], [http://www.ebi.ac.uk/pdbsum/5c5w PDBsum]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5c5w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5c5w OCA], [http://pdbe.org/5c5w PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5c5w RCSB], [http://www.ebi.ac.uk/pdbsum/5c5w PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5c5w ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 20:24, 30 November 2015

OCA — Mon, 30 Nov 2015 20:24:42 GMT

←Older revision		Revision as of 20:24, 30 November 2015
Line 5:		Line 5:
	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5c5w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5c5w OCA], [http://pdbe.org/5c5w PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5c5w RCSB], [http://www.ebi.ac.uk/pdbsum/5c5w PDBsum]</span></td></tr>		</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5c5w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5c5w OCA], [http://pdbe.org/5c5w PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5c5w RCSB], [http://www.ebi.ac.uk/pdbsum/5c5w PDBsum]</span></td></tr>
	</table>		</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The 1.25 A resolution H32:R crystal structure of a 20 nt ribonucleotide that binds to the TREX-2 complex with high affinity shows a double-stranded RNA duplex arranged along a crystallographic 31 axis in which the antiparallel chains overlap by 18 nucleotides and are related by a crystallographic twofold axis. The duplex shows C-A, U-U and C-C noncanonical base pairings together with canonical Watson-Crick A-U and G-C pairs and a G-U wobble.
		+
		+	1.25 A resolution structure of an RNA 20-mer that binds to the TREX2 complex.,Valkov E, Stewart M Acta Crystallogr F Struct Biol Commun. 2015 Oct 1;71(Pt 10):1318-21. doi:, 10.1107/S2053230X1501643X. Epub 2015 Sep 23. PMID:26457524<ref>PMID:26457524</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 5c5w" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 04:07, 16 October 2015

OCA — Fri, 16 Oct 2015 04:07:25 GMT

←Older revision		Revision as of 04:07, 16 October 2015
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-	'''~~Unreleased structure~~'''	+	==1.25 A resolution structure of an RNA 20-mer==
-		+	<StructureSection load='5c5w' size='340' side='right' caption='[[5c5w]], [[Resolution\|resolution]] 1.25Å' scene=''>
-	~~The entry~~ 5c5w is ~~ON HOLD until Paper Publication~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[5c5w]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5C5W OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5C5W FirstGlance]. <br>
-	~~Authors~~: ~~Stewart, M~~.~~, Valkov, E~~.	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5c5w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5c5w OCA], [http://pdbe.org/5c5w PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5c5w RCSB], [http://www.ebi.ac.uk/pdbsum/5c5w PDBsum]</span></td></tr>
-		+	</table>
-	~~Description: 1~~.~~25 A resolution~~ structure ~~of an RNA 20~~-~~mer~~	+	__TOC__
-	[[~~Category~~: ~~Unreleased Structures~~]]	+	</StructureSection>
-	[~~[Category~~: ~~Valkov~~, E]]	+
	[[Category: Stewart, M]]		[[Category: Stewart, M]]
		+	[[Category: Valkov, E]]
		+	[[Category: A-c]]
		+	[[Category: C-c]]
		+	[[Category: Duplex]]
		+	[[Category: G-u base pairing]]
		+	[[Category: Rna]]

OCA: Protected "5c5w" [edit=sysop:move=sysop]

OCA — Wed, 01 Jul 2015 11:10:44 GMT

Protected "5c5w" [edit=sysop:move=sysop]

←Older revision

Revision as of 11:10, 1 July 2015

OCA: New page: '''Unreleased structure''' The entry 5c5w is ON HOLD until Paper Publication Authors: Stewart, M., Valkov, E. Description: 1.25 A resolution structure of an RNA 20-mer [[Category: Unre...

OCA — Wed, 01 Jul 2015 11:10:43 GMT

New page: '''Unreleased structure''' The entry 5c5w is ON HOLD until Paper Publication Authors: Stewart, M., Valkov, E. Description: 1.25 A resolution structure of an RNA 20-mer [[Category: Unre...

New page

'''Unreleased structure'''

The entry 5c5w is ON HOLD until Paper Publication

Authors: Stewart, M., Valkov, E.

Description: 1.25 A resolution structure of an RNA 20-mer
[[Category: Unreleased Structures]]
[[Category: Valkov, E]]
[[Category: Stewart, M]]