5cv9 - Revision history

OCA at 08:40, 27 September 2023

OCA — Wed, 27 Sep 2023 08:40:52 GMT

←Older revision		Revision as of 08:40, 27 September 2023
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[5cv9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5CV9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5CV9 FirstGlance]. <br>		<table><tr><td colspan='2'>[[5cv9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5CV9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5CV9 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=THP:THYMIDINE-3,5-DIPHOSPHATE'>THP</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.62Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=THP:THYMIDINE-3,5-DIPHOSPHATE'>THP</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5cv9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5cv9 OCA], [https://pdbe.org/5cv9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5cv9 RCSB], [https://www.ebi.ac.uk/pdbsum/5cv9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5cv9 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5cv9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5cv9 OCA], [https://pdbe.org/5cv9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5cv9 RCSB], [https://www.ebi.ac.uk/pdbsum/5cv9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5cv9 ProSAT]</span></td></tr>
	</table>		</table>

OCA at 10:09, 21 June 2023

OCA — Wed, 21 Jun 2023 10:09:13 GMT

←Older revision		Revision as of 10:09, 21 June 2023
Line 3:		Line 3:
	<StructureSection load='5cv9' size='340' side='right'caption='[[5cv9]], [[Resolution\|resolution]] 1.62Å' scene=''>		<StructureSection load='5cv9' size='340' side='right'caption='[[5cv9]], [[Resolution\|resolution]] 1.62Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5cv9]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~"micrococcus_aureus"_(rosenbach_1884)_zopf_1885 "micrococcus~~ aureus~~" (rosenbach 1884) zopf 1885~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5CV9 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5CV9 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5cv9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5CV9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5CV9 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=THP:THYMIDINE-3,5-DIPHOSPHATE'>THP</scene~~></td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=THP:THYMIDINE-3,5-DIPHOSPHATE'>THP</scene></td></tr>
-	~~<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3bdc\|3bdc]]</td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5cv9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5cv9 OCA], [https://pdbe.org/5cv9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5cv9 RCSB], [https://www.ebi.ac.uk/pdbsum/5cv9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5cv9 ProSAT]</span></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">nuc ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 "Micrococcus aureus" (Rosenbach 1884) Zopf 1885])</td></tr>	+
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Micrococcal_nuclease Micrococcal nuclease], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.31.1 3.1.31.1] </span></td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5cv9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5cv9 OCA], [~~http~~://pdbe.org/5cv9 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5cv9 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5cv9 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5cv9 ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/NUC_STAAU NUC_STAAU]] Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond.	+	[https://www.uniprot.org/uniprot/NUC_STAAU NUC_STAAU] Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond.

	==See Also==		==See Also==
-	*[[Staphylococcal nuclease\|Staphylococcal nuclease]]	+	*[[Staphylococcal nuclease 3D structures\|Staphylococcal nuclease 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Micrococcal nuclease~~]]	+	[[Category: Staphylococcus aureus]]
-	[[Category: ~~E., B~~ Garcia-Moreno]]	+	[[Category: Garcia-Moreno E B]]
-	[[Category: Robinson~~, A C~~]]	+	[[Category: Robinson AC]]
-	[[Category: Schlessman~~, J L~~]]	+	[[Category: Schlessman JL]]
-	[[Category: Theodoru, A]]	+	[[Category: Theodoru A]]
-	~~[[Category: Hydrolase]]~~	+
-	~~[[Category: Hyperstable]]~~	+
-	~~[[Category: Ionizable group]]~~	+
-	~~[[Category: Nuclease]]~~	+
-	~~[[Category: Pdtp~~]]	+

OCA at 11:16, 25 December 2019

OCA — Wed, 25 Dec 2019 11:16:29 GMT

←Older revision		Revision as of 11:16, 25 December 2019
Line 1:		Line 1:

	==Crystal structure of Staphylococcal nuclease variant Delta+PHS L36E/V66H at cryogenic temperature==		==Crystal structure of Staphylococcal nuclease variant Delta+PHS L36E/V66H at cryogenic temperature==
-	<StructureSection load='5cv9' size='340' side='right' caption='[[5cv9]], [[Resolution\|resolution]] 1.62Å' scene=''>	+	<StructureSection load='5cv9' size='340' side='right'caption='[[5cv9]], [[Resolution\|resolution]] 1.62Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5cv9]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5CV9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5CV9 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5cv9]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"micrococcus_aureus"_(rosenbach_1884)_zopf_1885 "micrococcus aureus" (rosenbach 1884) zopf 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5CV9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5CV9 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=THP:THYMIDINE-3,5-DIPHOSPHATE'>THP</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=THP:THYMIDINE-3,5-DIPHOSPHATE'>THP</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3bdc\|3bdc]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3bdc\|3bdc]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">nuc ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 "Micrococcus aureus" (Rosenbach 1884) Zopf 1885])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Micrococcal_nuclease Micrococcal nuclease], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.31.1 3.1.31.1] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Micrococcal_nuclease Micrococcal nuclease], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.31.1 3.1.31.1] </span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5cv9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5cv9 OCA], [http://pdbe.org/5cv9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5cv9 RCSB], [http://www.ebi.ac.uk/pdbsum/5cv9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5cv9 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5cv9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5cv9 OCA], [http://pdbe.org/5cv9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5cv9 RCSB], [http://www.ebi.ac.uk/pdbsum/5cv9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5cv9 ProSAT]</span></td></tr>
Line 16:		Line 17:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Micrococcal nuclease]]		[[Category: Micrococcal nuclease]]
	[[Category: E., B Garcia-Moreno]]		[[Category: E., B Garcia-Moreno]]

OCA at 06:36, 6 October 2017

OCA — Fri, 06 Oct 2017 06:36:49 GMT

←Older revision		Revision as of 06:36, 6 October 2017
Line 11:		Line 11:
	== Function ==		== Function ==
	[[http://www.uniprot.org/uniprot/NUC_STAAU NUC_STAAU]] Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond.		[[http://www.uniprot.org/uniprot/NUC_STAAU NUC_STAAU]] Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond.
		+
		+	==See Also==
		+	*[[Staphylococcal nuclease\|Staphylococcal nuclease]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 16:09, 17 May 2017

OCA — Wed, 17 May 2017 16:09:16 GMT

←Older revision		Revision as of 16:09, 17 May 2017
Line 1:		Line 1:
		+
	==Crystal structure of Staphylococcal nuclease variant Delta+PHS L36E/V66H at cryogenic temperature==		==Crystal structure of Staphylococcal nuclease variant Delta+PHS L36E/V66H at cryogenic temperature==
	<StructureSection load='5cv9' size='340' side='right' caption='[[5cv9]], [[Resolution\|resolution]] 1.62Å' scene=''>		<StructureSection load='5cv9' size='340' side='right' caption='[[5cv9]], [[Resolution\|resolution]] 1.62Å' scene=''>
Line 6:		Line 7:
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3bdc\|3bdc]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3bdc\|3bdc]]</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Micrococcal_nuclease Micrococcal nuclease], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.31.1 3.1.31.1] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Micrococcal_nuclease Micrococcal nuclease], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.31.1 3.1.31.1] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5cv9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5cv9 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=5cv9 RCSB], [http://www.ebi.ac.uk/pdbsum/5cv9 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5cv9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5cv9 OCA], [http://pdbe.org/5cv9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5cv9 RCSB], [http://www.ebi.ac.uk/pdbsum/5cv9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5cv9 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==

OCA at 14:57, 12 August 2015

OCA — Wed, 12 Aug 2015 14:57:03 GMT

←Older revision		Revision as of 14:57, 12 August 2015
Line 1:		Line 1:
-	'''~~Unreleased structure~~'''	+	==Crystal structure of Staphylococcal nuclease variant Delta+PHS L36E/V66H at cryogenic temperature==
-		+	<StructureSection load='5cv9' size='340' side='right' caption='[[5cv9]], [[Resolution\|resolution]] 1.62Å' scene=''>
-	~~The entry~~ 5cv9 is ~~ON HOLD~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[5cv9]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5CV9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5CV9 FirstGlance]. <br>
-	~~Authors~~: ~~Theodoru~~, A., ~~Robinson, A~~.C., ~~Schlessman, J~~.L., ~~Garcia~~-~~Moreno E~~., B.	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=THP:THYMIDINE-3,5-DIPHOSPHATE'>THP</scene></td></tr>
-		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3bdc\|3bdc]]</td></tr>
-	~~Description~~: ~~Crystal structure of Staphylococcal nuclease variant Delta+PHS L36E~~/~~V66H~~ at ~~cryogenic temperature~~	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Micrococcal_nuclease Micrococcal nuclease], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.31.1 3.1.31.1] </span></td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5cv9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5cv9 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=5cv9 RCSB], [http://www.ebi.ac.uk/pdbsum/5cv9 PDBsum]</span></td></tr>
-	[[Category: ~~Schlessman, J~~.L]]	+	</table>
-	[[Category: ~~Garcia-Moreno E~~]]	+	== Function ==
-	[[Category: B]]	+	[[http://www.uniprot.org/uniprot/NUC_STAAU NUC_STAAU]] Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond.
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Micrococcal nuclease]]
		+	[[Category: E., B Garcia-Moreno]]
		+	[[Category: Robinson, A C]]
		+	[[Category: Schlessman, J L]]
	[[Category: Theodoru, A]]		[[Category: Theodoru, A]]
-	[[Category: ~~Robinson, A.C~~]]	+	[[Category: Hydrolase]]
		+	[[Category: Hyperstable]]
		+	[[Category: Ionizable group]]
		+	[[Category: Nuclease]]
		+	[[Category: Pdtp]]

OCA: Protected "5cv9" [edit=sysop:move=sysop]

OCA — Wed, 05 Aug 2015 19:00:05 GMT

Protected "5cv9" [edit=sysop:move=sysop]

←Older revision

Revision as of 19:00, 5 August 2015

OCA: New page: '''Unreleased structure''' The entry 5cv9 is ON HOLD Authors: Theodoru, A., Robinson, A.C., Schlessman, J.L., Garcia-Moreno E., B. Description: Crystal structure of Staphylococcal nucl...

OCA — Wed, 05 Aug 2015 19:00:04 GMT

New page: '''Unreleased structure''' The entry 5cv9 is ON HOLD Authors: Theodoru, A., Robinson, A.C., Schlessman, J.L., Garcia-Moreno E., B. Description: Crystal structure of Staphylococcal nucl...

New page

'''Unreleased structure'''

The entry 5cv9 is ON HOLD

Authors: Theodoru, A., Robinson, A.C., Schlessman, J.L., Garcia-Moreno E., B.

Description: Crystal structure of Staphylococcal nuclease variant Delta+PHS L36E/V66H at cryogenic temperature
[[Category: Unreleased Structures]]
[[Category: Schlessman, J.L]]
[[Category: Garcia-Moreno E]]
[[Category: B]]
[[Category: Theodoru, A]]
[[Category: Robinson, A.C]]