5dla - Revision history

OCA at 21:47, 28 June 2023

OCA — Wed, 28 Jun 2023 21:47:36 GMT

←Older revision		Revision as of 21:47, 28 June 2023
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	==Structure of Tetragonal Lysozyme solved by UWO Students==		==Structure of Tetragonal Lysozyme solved by UWO Students==
-	<StructureSection load='5dla' size='340' side='right' caption='[[5dla]], [[Resolution\|resolution]] 1.22Å' scene=''>	+	<StructureSection load='5dla' size='340' side='right'caption='[[5dla]], [[Resolution\|resolution]] 1.22Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5dla]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Chick Chick~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DLA OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5DLA FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5dla]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DLA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5DLA FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat"~~><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.22Å</td></tr>
-	~~<tr~~ id~~='related'><td class~~="~~sblockLbl~~">~~<b>~~[[~~Related_structure~~\|~~Related:]]</b></td><td class="sblockDat">[[5dl9\|5dl9~~]]</td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat"~~>LYZ ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&~~id=~~9031 CHICK])</td~~><~~/tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5dla FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dla OCA], [https://pdbe.org/5dla PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5dla RCSB], [https://www.ebi.ac.uk/pdbsum/5dla PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5dla ProSAT]</span></td></tr>
-	~~<tr id~~='~~activity'><td class~~=~~"sblockLbl"><b>Activity~~:~~</b~~></td><~~td class~~=~~"sblockDat"><span class~~=~~'plainlinks'>[http~~:~~//en.wikipedia.org/wiki/Lysozyme Lysozyme]~~, ~~with EC number [http://www.brenda~~-~~enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17]~~ </~~span~~></td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5dla FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dla OCA], [~~http~~://pdbe.org/5dla PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5dla RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5dla PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5dla ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK]] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>	+	[https://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>
		+
		+	==See Also==
		+	*[[Lysozyme 3D structures\|Lysozyme 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Chick~~]]	+	[[Category: Gallus gallus]]
-	[[Category: ~~Lysozyme~~]]	+	[[Category: Large Structures]]
-	[[Category: Bednarski, R]]	+	[[Category: Bednarski R]]
-	[[Category: Bianchetti~~, C M~~]]	+	[[Category: Bianchetti CM]]
-	[[Category: Cirricione, N]]	+	[[Category: Cirricione N]]
-	[[Category: Greco, A]]	+	[[Category: Greco A]]
-	[[Category: Hodgson, R]]	+	[[Category: Hodgson R]]
-	[[Category: Kent, S]]	+	[[Category: Kent S]]
-	[[Category: McGowan, J]]	+	[[Category: McGowan J]]
-	[[Category: Notherm, B]]	+	[[Category: Notherm B]]
-	[[Category: Patt, M]]	+	[[Category: Patt M]]
-	[[Category: Vue, L]]	+	[[Category: Vue L]]
-	~~[[Category: Enzyme]]~~	+
-	~~[[Category: Glycoside hydrolase]]~~	+
-	~~[[Category: Hydrolase~~]]	+

OCA: Protected "5dla" [edit=sysop:move=sysop]

OCA — Thu, 16 Nov 2017 17:24:15 GMT

Protected "5dla" [edit=sysop:move=sysop]

←Older revision

Revision as of 17:24, 16 November 2017

OCA: New page: ==Structure of Tetragonal Lysozyme solved by UWO Students== == St...

OCA — Thu, 16 Nov 2017 17:24:13 GMT

New page: ==Structure of Tetragonal Lysozyme solved by UWO Students== <StructureSection load='5dla' size='340' side='right' caption='5dla, resolution 1.22Å' scene=''> == St...

New page

==Structure of Tetragonal Lysozyme solved by UWO Students==
<StructureSection load='5dla' size='340' side='right' caption='[[5dla]], [[Resolution|resolution]] 1.22Å' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[5dla]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Chick Chick]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DLA OCA]. For a guided tour on the structure components use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5DLA FirstGlance]. 
</td></tr><tr id='ligand'><td class="sblockLbl">[[Ligand|Ligands:]]</td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
<tr id='related'><td class="sblockLbl">[[Related_structure|Related:]]</td><td class="sblockDat">[[5dl9|5dl9]]</td></tr>
<tr id='gene'><td class="sblockLbl">[[Gene|Gene:]]</td><td class="sblockDat">LYZ ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9031 CHICK])</td></tr>
<tr id='activity'><td class="sblockLbl">Activity:</td><td class="sblockDat">[http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </td></tr>
<tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5dla FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dla OCA], [http://pdbe.org/5dla PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5dla RCSB], [http://www.ebi.ac.uk/pdbsum/5dla PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5dla ProSAT]</td></tr>
</table>
== Function ==
[[http://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK]] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Chick]]
[[Category: Lysozyme]]
[[Category: Bednarski, R]]
[[Category: Bianchetti, C M]]
[[Category: Cirricione, N]]
[[Category: Greco, A]]
[[Category: Hodgson, R]]
[[Category: Kent, S]]
[[Category: McGowan, J]]
[[Category: Notherm, B]]
[[Category: Patt, M]]
[[Category: Vue, L]]
[[Category: Enzyme]]
[[Category: Glycoside hydrolase]]
[[Category: Hydrolase]]