5dqm - Revision history

OCA at 21:55, 28 June 2023

OCA — Wed, 28 Jun 2023 21:55:16 GMT

←Older revision		Revision as of 21:55, 28 June 2023
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	<StructureSection load='5dqm' size='340' side='right'caption='[[5dqm]], [[Resolution\|resolution]] 1.30Å' scene=''>		<StructureSection load='5dqm' size='340' side='right'caption='[[5dqm]], [[Resolution\|resolution]] 1.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5dqm]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DQM OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=5DQM FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5dqm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aequorea_coerulescens Aequorea coerulescens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DQM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5DQM FirstGlance]. <br>
-	</td></tr><tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non~~-~~Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"><scene name='pdbligand=CRF:[(4Z)-2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(1H-INDOL-3-YLMETHYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL]ACETIC+ACID'>CRF</scene>~~</td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.3Å</td></tr>
-	~~<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5dqb\|5dqb]]~~</td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CRF:[(4Z)-2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(1H-INDOL-3-YLMETHYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL]ACETIC+ACID'>CRF</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=5dqm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dqm OCA], [~~http~~://pdbe.org/5dqm PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5dqm RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5dqm PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5dqm ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5dqm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dqm OCA], [https://pdbe.org/5dqm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5dqm RCSB], [https://www.ebi.ac.uk/pdbsum/5dqm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5dqm ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/GFP_AEQVI GFP_AEQVI] Energy-transfer acceptor. Its role is to transduce the blue chemiluminescence of the protein aequorin into green fluorescent light by energy transfer. Fluoresces in vivo upon receiving energy from the Ca(2+)-activated photoprotein aequorin.

	==See Also==		==See Also==
Line 13:		Line 15:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Aequorea coerulescens]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Pletnev~~, S V~~]]	+	[[Category: Pletnev SV]]
-	[[Category: Pletnev~~, V Z~~]]	+	[[Category: Pletnev VZ]]
-	[[Category: Pletneva~~, N V]]~~	+	[[Category: Pletneva NV]]
-	~~[[Category: Anionic trp based chromophore]]~~	+
-	~~[[Category: Fluorescent protein]]~~	+
-	~~[[Category: Green/cyan fluorescent protein]]~~	+
-	~~[[Category: Ph and t dependence~~]]	+

OCA at 08:14, 8 April 2020

OCA — Wed, 08 Apr 2020 08:14:41 GMT

←Older revision		Revision as of 08:14, 8 April 2020
Line 1:		Line 1:

	==Green/cyan WasCFP at pH 2.0==		==Green/cyan WasCFP at pH 2.0==
-	<StructureSection load='5dqm' size='340' side='right' caption='[[5dqm]], [[Resolution\|resolution]] 1.30Å' scene=''>	+	<StructureSection load='5dqm' size='340' side='right'caption='[[5dqm]], [[Resolution\|resolution]] 1.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5dqm]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DQM OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5DQM FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5dqm]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DQM OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5DQM FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CRF:[(4Z)-2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(1H-INDOL-3-YLMETHYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL]ACETIC+ACID'>CRF</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CRF:[(4Z)-2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(1H-INDOL-3-YLMETHYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL]ACETIC+ACID'>CRF</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5dqb\|5dqb]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5dqb\|5dqb]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5dqm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dqm OCA], [http://pdbe.org/5dqm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5dqm RCSB], [http://www.ebi.ac.uk/pdbsum/5dqm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5dqm ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5dqm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dqm OCA], [http://pdbe.org/5dqm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5dqm RCSB], [http://www.ebi.ac.uk/pdbsum/5dqm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5dqm ProSAT]</span></td></tr>
	</table>		</table>

	==See Also==		==See Also==
-	*[[Green Fluorescent Protein\|Green Fluorescent Protein]]	+	*[[Green Fluorescent Protein 3D structures\|Green Fluorescent Protein 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Pletnev, S V]]		[[Category: Pletnev, S V]]
	[[Category: Pletnev, V Z]]		[[Category: Pletnev, V Z]]

OCA at 06:40, 6 October 2017

OCA — Fri, 06 Oct 2017 06:40:28 GMT

←Older revision		Revision as of 06:40, 6 October 2017
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	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5dqm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dqm OCA], [http://pdbe.org/5dqm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5dqm RCSB], [http://www.ebi.ac.uk/pdbsum/5dqm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5dqm ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5dqm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dqm OCA], [http://pdbe.org/5dqm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5dqm RCSB], [http://www.ebi.ac.uk/pdbsum/5dqm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5dqm ProSAT]</span></td></tr>
	</table>		</table>
		+
		+	==See Also==
		+	*[[Green Fluorescent Protein\|Green Fluorescent Protein]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 15:37, 27 July 2016

OCA — Wed, 27 Jul 2016 15:37:21 GMT

←Older revision		Revision as of 15:37, 27 July 2016
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry~~ 5dqm is ~~ON HOLD until Paper Publication~~	+	==Green/cyan WasCFP at pH 2.0==
-		+	<StructureSection load='5dqm' size='340' side='right' caption='[[5dqm]], [[Resolution\|resolution]] 1.30Å' scene=''>
-	~~Authors~~: ~~Pletnev~~, V.Z., ~~Pletneva~~, N.V., ~~Pletnev~~, S.V.	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[5dqm]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DQM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5DQM FirstGlance]. <br>
-	~~Description: Green~~/~~cyan WasCFP at pH 2.0~~	+	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CRF:[(4Z)-2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(1H-INDOL-3-YLMETHYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL]ACETIC+ACID'>CRF</scene></td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5dqb\|5dqb]]</td></tr>
-	[[Category: Pletnev, V.Z]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5dqm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dqm OCA], [http://pdbe.org/5dqm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5dqm RCSB], [http://www.ebi.ac.uk/pdbsum/5dqm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5dqm ProSAT]</span></td></tr>
-	[[Category: Pletneva, N.V]]	+	</table>
-	[[Category: ~~Pletnev, S.V~~]]	+	__TOC__
		+	</StructureSection>
		+	[[Category: Pletnev, S V]]
		+	[[Category: Pletnev, V Z]]
		+	[[Category: Pletneva, N V]]
		+	[[Category: Anionic trp based chromophore]]
		+	[[Category: Fluorescent protein]]
		+	[[Category: Green/cyan fluorescent protein]]
		+	[[Category: Ph and t dependence]]

OCA: Protected "5dqm" [edit=sysop:move=sysop]

OCA — Wed, 30 Sep 2015 13:23:02 GMT

Protected "5dqm" [edit=sysop:move=sysop]

←Older revision

Revision as of 13:23, 30 September 2015

OCA: New page: '''Unreleased structure''' The entry 5dqm is ON HOLD until Paper Publication Authors: Pletnev, V.Z., Pletneva, N.V., Pletnev, S.V. Description: Green/cyan WasCFP at pH 2.0 [[Category: ...

OCA — Wed, 30 Sep 2015 13:23:00 GMT

New page: '''Unreleased structure''' The entry 5dqm is ON HOLD until Paper Publication Authors: Pletnev, V.Z., Pletneva, N.V., Pletnev, S.V. Description: Green/cyan WasCFP at pH 2.0 [[Category: ...

New page

'''Unreleased structure'''

The entry 5dqm is ON HOLD until Paper Publication

Authors: Pletnev, V.Z., Pletneva, N.V., Pletnev, S.V.

Description: Green/cyan WasCFP at pH 2.0
[[Category: Unreleased Structures]]
[[Category: Pletnev, V.Z]]
[[Category: Pletneva, N.V]]
[[Category: Pletnev, S.V]]