5ibo - Revision history

OCA at 13:44, 30 August 2023

OCA — Wed, 30 Aug 2023 13:44:39 GMT

←Older revision		Revision as of 13:44, 30 August 2023
Line 3:		Line 3:
	<StructureSection load='5ibo' size='340' side='right'caption='[[5ibo]], [[Resolution\|resolution]] 1.95Å' scene=''>		<StructureSection load='5ibo' size='340' side='right'caption='[[5ibo]], [[Resolution\|resolution]] 1.95Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5ibo]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Luminous_shrimp Luminous shrimp~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IBO OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=5IBO FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5ibo]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Oplophorus_gracilirostris Oplophorus gracilirostris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IBO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5IBO FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=DKA:DECANOIC+ACID'>DKA</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.95Å</td></tr>
-	<tr id='~~activity~~'><td class="sblockLbl"><b>~~Activity~~:</b></td><td class="sblockDat"><~~span class~~='~~plainlinks~~'>[http://en.wikipedia.org/wiki/Oplophorus-luciferin_2-monooxygenase Oplophorus-luciferin 2-monooxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.13.12.13 1.13.12.13] </~~span~~></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DKA:DECANOIC+ACID'>DKA</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=5ibo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ibo OCA], [~~http~~://pdbe.org/5ibo PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5ibo RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5ibo PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5ibo ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ibo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ibo OCA], [https://pdbe.org/5ibo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ibo RCSB], [https://www.ebi.ac.uk/pdbsum/5ibo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ibo ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/LUCI_OPLGR LUCI_OPLGR]] Catalytic subunit of oplophorus-luciferin 2-monooxygenase. Oxidoreductase that converts coelenterazine (the oplophorus luciferin) to coelenteramide under emission of blue light with a maximum at 454 nm. Is also active with bisdeoxycoelenterazine.<ref>PMID:10984608</ref>	+	[https://www.uniprot.org/uniprot/LUCI_OPLGR LUCI_OPLGR] Catalytic subunit of oplophorus-luciferin 2-monooxygenase. Oxidoreductase that converts coelenterazine (the oplophorus luciferin) to coelenteramide under emission of blue light with a maximum at 454 nm. Is also active with bisdeoxycoelenterazine.<ref>PMID:10984608</ref>
		+
		+	==See Also==
		+	*[[Luciferase 3D structures\|Luciferase 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
Line 15:		Line 18:
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	~~[[Category: Luminous shrimp]]~~	+	[[Category: Oplophorus gracilirostris]]
-	[[Category: Oplophorus~~-luciferin 2-monooxygenase~~]]	+	[[Category: Battaile KP]]
-	[[Category: Battaile~~, K P~~]]	+	[[Category: Encell LP]]
-	[[Category: Encell~~, L P~~]]	+	[[Category: Lovell S]]
-	[[Category: Lovell, S]]	+	[[Category: Mehzabeen N]]
-	[[Category: Mehzabeen, N]]	+	[[Category: Wood KV]]
-	[[Category: Wood~~, K V~~]]	+	[[Category: Wood MG]]
-	[[Category: Wood~~, M G]]~~	+
-	~~[[Category: Beta-barrel]]~~	+
-	~~[[Category: Coelenterazine]]~~	+
-	~~[[Category: Furimazine]]~~	+
-	~~[[Category: Nanoluc luciferase]]~~	+
-	~~[[Category: Nluc]]~~	+
-	~~[[Category: Oplophorus bioluminescent protein]]~~	+
-	~~[[Category: Oxidoreductase~~]]	+

OCA at 07:11, 3 June 2020

OCA — Wed, 03 Jun 2020 07:11:58 GMT

←Older revision		Revision as of 07:11, 3 June 2020
Line 1:		Line 1:

	==1.95A resolution structure of NanoLuc luciferase==		==1.95A resolution structure of NanoLuc luciferase==
-	<StructureSection load='5ibo' size='340' side='right' caption='[[5ibo]], [[Resolution\|resolution]] 1.95Å' scene=''>	+	<StructureSection load='5ibo' size='340' side='right'caption='[[5ibo]], [[Resolution\|resolution]] 1.95Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5ibo]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IBO OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5IBO FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5ibo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Luminous_shrimp Luminous shrimp]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IBO OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5IBO FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DKA:DECANOIC+ACID'>DKA</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DKA:DECANOIC+ACID'>DKA</scene></td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Oplophorus-luciferin_2-monooxygenase Oplophorus-luciferin 2-monooxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.13.12.13 1.13.12.13] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Oplophorus-luciferin_2-monooxygenase Oplophorus-luciferin 2-monooxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.13.12.13 1.13.12.13] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5ibo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ibo OCA], [http://pdbe.org/5ibo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ibo RCSB], [http://www.ebi.ac.uk/pdbsum/5ibo PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5ibo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ibo OCA], [http://pdbe.org/5ibo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ibo RCSB], [http://www.ebi.ac.uk/pdbsum/5ibo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ibo ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 14:		Line 14:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
		+	[[Category: Luminous shrimp]]
	[[Category: Oplophorus-luciferin 2-monooxygenase]]		[[Category: Oplophorus-luciferin 2-monooxygenase]]
	[[Category: Battaile, K P]]		[[Category: Battaile, K P]]

OCA at 11:30, 12 May 2016

OCA — Thu, 12 May 2016 11:30:33 GMT

←Older revision		Revision as of 11:30, 12 May 2016
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry~~ 5ibo ~~is ON HOLD~~	+	==1.95A resolution structure of NanoLuc luciferase==
-		+	<StructureSection load='5ibo' size='340' side='right' caption='[[5ibo]], [[Resolution\|resolution]] 1.95Å' scene=''>
-	~~Authors~~: ~~Lovell, S~~.~~, Mehzabeen, N~~.~~, Battaile, K~~.P.~~, Wood, M~~.G.~~, Encell, L~~.P.~~, Wood, K.V~~.	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[5ibo]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IBO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5IBO FirstGlance]. <br>
-	~~Description~~: 1.~~95A resolution structure of NanoLuc luciferase~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DKA:DECANOIC+ACID'>DKA</scene></td></tr>
-	[[~~Category~~: ~~Unreleased Structures~~]]	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Oplophorus-luciferin_2-monooxygenase Oplophorus-luciferin 2-monooxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.13.12.13 1.13.12.13] </span></td></tr>
-	[[~~Category~~: ~~Wood, M~~.G]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ibo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ibo OCA], [http://pdbe.org/5ibo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ibo RCSB], [http://www.ebi.ac.uk/pdbsum/5ibo PDBsum]</span></td></tr>
-	[[Category: ~~Encell, L.P~~]]	+	</table>
-	[[Category: Battaile, K.P]]	+	== Function ==
-	[[Category: ~~Wood~~, ~~K.V~~]]	+	[[http://www.uniprot.org/uniprot/LUCI_OPLGR LUCI_OPLGR]] Catalytic subunit of oplophorus-luciferin 2-monooxygenase. Oxidoreductase that converts coelenterazine (the oplophorus luciferin) to coelenteramide under emission of blue light with a maximum at 454 nm. Is also active with bisdeoxycoelenterazine.<ref>PMID:10984608</ref>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Oplophorus-luciferin 2-monooxygenase]]
		+	[[Category: Battaile, K P]]
		+	[[Category: Encell, L P]]
	[[Category: Lovell, S]]		[[Category: Lovell, S]]
	[[Category: Mehzabeen, N]]		[[Category: Mehzabeen, N]]
		+	[[Category: Wood, K V]]
		+	[[Category: Wood, M G]]
		+	[[Category: Beta-barrel]]
		+	[[Category: Coelenterazine]]
		+	[[Category: Furimazine]]
		+	[[Category: Nanoluc luciferase]]
		+	[[Category: Nluc]]
		+	[[Category: Oplophorus bioluminescent protein]]
		+	[[Category: Oxidoreductase]]

OCA: Protected "5ibo" [edit=sysop:move=sysop]

OCA — Wed, 02 Mar 2016 13:41:24 GMT

Protected "5ibo" [edit=sysop:move=sysop]

←Older revision

Revision as of 13:41, 2 March 2016

OCA: New page: '''Unreleased structure''' The entry 5ibo is ON HOLD Authors: Lovell, S., Mehzabeen, N., Battaile, K.P., Wood, M.G., Encell, L.P., Wood, K.V. Description: 1.95A resolution structure of...

OCA — Wed, 02 Mar 2016 13:41:22 GMT

New page: '''Unreleased structure''' The entry 5ibo is ON HOLD Authors: Lovell, S., Mehzabeen, N., Battaile, K.P., Wood, M.G., Encell, L.P., Wood, K.V. Description: 1.95A resolution structure of...

New page

'''Unreleased structure'''

The entry 5ibo is ON HOLD

Authors: Lovell, S., Mehzabeen, N., Battaile, K.P., Wood, M.G., Encell, L.P., Wood, K.V.

Description: 1.95A resolution structure of NanoLuc luciferase
[[Category: Unreleased Structures]]
[[Category: Wood, M.G]]
[[Category: Encell, L.P]]
[[Category: Battaile, K.P]]
[[Category: Wood, K.V]]
[[Category: Lovell, S]]
[[Category: Mehzabeen, N]]