5ilk - Revision history

OCA at 14:00, 30 August 2023

OCA — Wed, 30 Aug 2023 14:00:32 GMT

←Older revision		Revision as of 14:00, 30 August 2023
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	<StructureSection load='5ilk' size='340' side='right'caption='[[5ilk]], [[Resolution\|resolution]] 2.35Å' scene=''>		<StructureSection load='5ilk' size='340' side='right'caption='[[5ilk]], [[Resolution\|resolution]] 2.35Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5ilk]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~American_tobacco American tobacco~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ILK OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=5ILK FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5ilk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Nicotiana_tabacum Nicotiana tabacum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ILK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5ILK FirstGlance]. <br>
-	</td></tr><tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat">[[5ik0\|5ik0]], [[5ik6\|5ik6]], [[5ik9\|5ik9]], [[5ika\|5ika]], [[5ikh\|5ikh]], [[5il3\|5il3]], [[5il8\|5il8]], [[5ild\|5ild]], [[5ilh\|5ilh]], [[5ili\|5ili]], [[5ilj\|5ilj]], [[5ily\|5ily]], [[5ilz\|5ilz]], [[5im1\|5im1]]</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.35Å</td></tr>
-	~~<tr~~ id~~='gene'><td class~~="~~sblockLbl~~">~~<b>~~[[~~Gene~~\|~~Gene:~~]]~~</b></td><td class="sblockDat">EAS3, EAS4 ([http://www~~.~~ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info~~&~~srchmode=5&id=4097 American tobacco])</td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ilk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ilk OCA], [https://pdbe.org/5ilk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ilk RCSB], [https://www.ebi.ac.uk/pdbsum/5ilk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ilk ProSAT]</span></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/5-epiaristolochene_synthase 5-epiaristolochene synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.3.61 4.2.3.61] </span></td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=5ilk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ilk OCA], [~~http~~://pdbe.org/5ilk PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5ilk RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5ilk PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5ilk ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/5EAS_TOBAC 5EAS_TOBAC]] Catalyzes the cyclization of trans,trans-farnesyl diphosphate (FPP) to the bicyclic intermediate 5-epi-aristolochene, initial step in the conversion of FPP to the sesquiterpenoid antifungal phytoalexin capsidiol. Produces germacrene A as an enzyme-bound intermediate that is not released by the enzyme, but is further cyclized to produce the bicyclic 5-epi-aristolochene.	+	[https://www.uniprot.org/uniprot/5EAS_TOBAC 5EAS_TOBAC] Catalyzes the cyclization of trans,trans-farnesyl diphosphate (FPP) to the bicyclic intermediate 5-epi-aristolochene, initial step in the conversion of FPP to the sesquiterpenoid antifungal phytoalexin capsidiol. Produces germacrene A as an enzyme-bound intermediate that is not released by the enzyme, but is further cyclized to produce the bicyclic 5-epi-aristolochene.
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: 5-epiaristolochene synthase]]
-	[[Category: American tobacco]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Bowman, M]]	+	[[Category: Nicotiana tabacum]]
-	[[Category: Koo~~, H J~~]]	+	[[Category: Bowman M]]
-	[[Category: Louie~~, G V~~]]	+	[[Category: Koo HJ]]
-	[[Category: Noel~~, J P~~]]	+	[[Category: Louie GV]]
-	[[Category: Xu, Y]]	+	[[Category: Noel JP]]
-	~~[[Category: Bis-tri]]~~	+	[[Category: Xu Y]]
-	~~[[Category: Lyase]]~~	+
-	~~[[Category: Mopso]]~~	+
-	~~[[Category: Tea]]~~	+
-	~~[[Category: Terpene synthase~~]]	+

OCA at 07:23, 3 June 2020

OCA — Wed, 03 Jun 2020 07:23:23 GMT

←Older revision		Revision as of 07:23, 3 June 2020
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	==Tobacco 5-epi-aristolochene synthase with partial density from MOPSO or BIS-TRIS buffer molecule in the active site==		==Tobacco 5-epi-aristolochene synthase with partial density from MOPSO or BIS-TRIS buffer molecule in the active site==
-	<StructureSection load='5ilk' size='340' side='right' caption='[[5ilk]], [[Resolution\|resolution]] 2.35Å' scene=''>	+	<StructureSection load='5ilk' size='340' side='right'caption='[[5ilk]], [[Resolution\|resolution]] 2.35Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5ilk]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ILK OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5ILK FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5ilk]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/American_tobacco American tobacco]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ILK OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5ILK FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5ik0\|5ik0]], [[5ik6\|5ik6]], [[5ik9\|5ik9]], [[5ika\|5ika]], [[5ikh\|5ikh]], [[5il3\|5il3]], [[5il8\|5il8]], [[5ild\|5ild]], [[5ilh\|5ilh]], [[5ili\|5ili]], [[5ilj\|5ilj]], [[5ily\|5ily]], [[5ilz\|5ilz]], [[5im1\|5im1]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5ik0\|5ik0]], [[5ik6\|5ik6]], [[5ik9\|5ik9]], [[5ika\|5ika]], [[5ikh\|5ikh]], [[5il3\|5il3]], [[5il8\|5il8]], [[5ild\|5ild]], [[5ilh\|5ilh]], [[5ili\|5ili]], [[5ilj\|5ilj]], [[5ily\|5ily]], [[5ilz\|5ilz]], [[5im1\|5im1]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">EAS3, EAS4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4097 American tobacco])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/5-epiaristolochene_synthase 5-epiaristolochene synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.3.61 4.2.3.61] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/5-epiaristolochene_synthase 5-epiaristolochene synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.3.61 4.2.3.61] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5ilk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ilk OCA], [http://pdbe.org/5ilk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ilk RCSB], [http://www.ebi.ac.uk/pdbsum/5ilk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ilk ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5ilk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ilk OCA], [http://pdbe.org/5ilk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ilk RCSB], [http://www.ebi.ac.uk/pdbsum/5ilk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ilk ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 13:		Line 14:
	</StructureSection>		</StructureSection>
	[[Category: 5-epiaristolochene synthase]]		[[Category: 5-epiaristolochene synthase]]
		+	[[Category: American tobacco]]
		+	[[Category: Large Structures]]
	[[Category: Bowman, M]]		[[Category: Bowman, M]]
	[[Category: Koo, H J]]		[[Category: Koo, H J]]

OCA at 19:14, 11 March 2017

OCA — Sat, 11 Mar 2017 19:14:53 GMT

←Older revision		Revision as of 19:14, 11 March 2017
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry~~ 5ilk is ~~ON HOLD until Paper Publication~~	+	==Tobacco 5-epi-aristolochene synthase with partial density from MOPSO or BIS-TRIS buffer molecule in the active site==
-		+	<StructureSection load='5ilk' size='340' side='right' caption='[[5ilk]], [[Resolution\|resolution]] 2.35Å' scene=''>
-	~~Authors~~:	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[5ilk]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ILK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ILK FirstGlance]. <br>
-	~~Description~~:	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5ik0\|5ik0]], [[5ik6\|5ik6]], [[5ik9\|5ik9]], [[5ika\|5ika]], [[5ikh\|5ikh]], [[5il3\|5il3]], [[5il8\|5il8]], [[5ild\|5ild]], [[5ilh\|5ilh]], [[5ili\|5ili]], [[5ilj\|5ilj]], [[5ily\|5ily]], [[5ilz\|5ilz]], [[5im1\|5im1]]</td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/5-epiaristolochene_synthase 5-epiaristolochene synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.3.61 4.2.3.61] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ilk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ilk OCA], [http://pdbe.org/5ilk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ilk RCSB], [http://www.ebi.ac.uk/pdbsum/5ilk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ilk ProSAT]</span></td></tr>
		+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/5EAS_TOBAC 5EAS_TOBAC]] Catalyzes the cyclization of trans,trans-farnesyl diphosphate (FPP) to the bicyclic intermediate 5-epi-aristolochene, initial step in the conversion of FPP to the sesquiterpenoid antifungal phytoalexin capsidiol. Produces germacrene A as an enzyme-bound intermediate that is not released by the enzyme, but is further cyclized to produce the bicyclic 5-epi-aristolochene.
		+	__TOC__
		+	</StructureSection>
		+	[[Category: 5-epiaristolochene synthase]]
		+	[[Category: Bowman, M]]
		+	[[Category: Koo, H J]]
		+	[[Category: Louie, G V]]
		+	[[Category: Noel, J P]]
		+	[[Category: Xu, Y]]
		+	[[Category: Bis-tri]]
		+	[[Category: Lyase]]
		+	[[Category: Mopso]]
		+	[[Category: Tea]]
		+	[[Category: Terpene synthase]]

OCA at 14:31, 15 May 2016

OCA — Sun, 15 May 2016 14:31:47 GMT

←Older revision		Revision as of 14:31, 15 May 2016
Line 3:		Line 3:
	The entry 5ilk is ON HOLD until Paper Publication		The entry 5ilk is ON HOLD until Paper Publication

-	Authors: ~~Koo, H.J., Louie, G.V., Xu, Y., Bowman, M., Noel, J.P.~~	+	Authors:

	Description:		Description:
	[[Category: Unreleased Structures]]		[[Category: Unreleased Structures]]
-	[[Category: Louie, G.V]]
-	[[Category: Koo, H.J]]
-	[[Category: Xu, Y]]
-	[[Category: Bowman, M]]
-	[[Category: Noel, J.P]]

OCA: Protected "5ilk" [edit=sysop:move=sysop]

OCA — Wed, 11 May 2016 00:37:05 GMT

Protected "5ilk" [edit=sysop:move=sysop]

←Older revision

Revision as of 00:37, 11 May 2016

OCA: New page: '''Unreleased structure''' The entry 5ilk is ON HOLD until Paper Publication Authors: Koo, H.J., Louie, G.V., Xu, Y., Bowman, M., Noel, J.P. Description: [[Category: Unreleased Struct...

OCA — Wed, 11 May 2016 00:37:04 GMT

New page: '''Unreleased structure''' The entry 5ilk is ON HOLD until Paper Publication Authors: Koo, H.J., Louie, G.V., Xu, Y., Bowman, M., Noel, J.P. Description: [[Category: Unreleased Struct...

New page

'''Unreleased structure'''

The entry 5ilk is ON HOLD until Paper Publication

Authors: Koo, H.J., Louie, G.V., Xu, Y., Bowman, M., Noel, J.P.

Description:
[[Category: Unreleased Structures]]
[[Category: Louie, G.V]]
[[Category: Koo, H.J]]
[[Category: Xu, Y]]
[[Category: Bowman, M]]
[[Category: Noel, J.P]]