5iv7 - Revision history

OCA at 10:33, 6 September 2023

OCA — Wed, 06 Sep 2023 10:33:08 GMT

←Older revision		Revision as of 10:33, 6 September 2023
Line 3:		Line 3:
	<SX load='5iv7' size='340' side='right' viewer='molstar' caption='[[5iv7]], [[Resolution\|resolution]] 6.77Å' scene=''>		<SX load='5iv7' size='340' side='right' viewer='molstar' caption='[[5iv7]], [[Resolution\|resolution]] 6.77Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5iv7]] is a 96 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Enterobacteria_phage_t4 Enterobacteria phage t4~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IV7 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=5IV7 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5iv7]] is a 96 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_T4 Escherichia virus T4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IV7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5IV7 FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=5iv7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5iv7 OCA], [~~http~~://pdbe.org/5iv7 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5iv7 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5iv7 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5iv7 ProSAT]</span></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution\|Resolution]] 6.77Å</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5iv7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5iv7 OCA], [https://pdbe.org/5iv7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5iv7 RCSB], [https://www.ebi.ac.uk/pdbsum/5iv7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5iv7 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[http://www.uniprot.org/uniprot/BP11_BPT4 BP11_BPT4]] Baseplate protein that is part of the baseplate wedge and that connects the short tail fibers to the baseplate (PubMed:15315755). Involved in the tail assembly.<ref>PMID:15315755</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP08_BPT4 BP08_BPT4]] Baseplate protein that is part of the baseplate wedge. Involved in the tail assembly.<ref>PMID:15315755</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP25_BPT4 BP25_BPT4]] Baseplate protein that is part of the outer wedges of the baseplate (PubMed:15315755). Probably plays a role as a connector between the central and peripheral parts of the baseplate. Involved in the tail assembly.[UniProtKB:P51768]<ref>PMID:15315755</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP07_BPT4 BP07_BPT4]] Baseplate protein that is part of the baseplate wedge. Involved in the tail assembly.<ref>PMID:2254933</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP53_BPT4 BP53_BPT4]] Baseplate protein that is part of the baseplate wedge (PubMed:15315755). Involved in the tail assembly.<ref>PMID:15315755</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP06_BPT4 BP06_BPT4]] Baseplate protein that is part of the baseplate wedge (PubMed:15315755). Involved in the tail assembly.<ref>PMID:15315755</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP09_BPT4 BP09_BPT4]] Baseplate protein that connects the long tail fibers to the baseplate and probably triggers the tail contraction after virus attachment to a host cell (PubMed:10545330). Involved in the tail assembly (PubMed:21129200).<ref>PMID:10545330</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP10_BPT4 BP10_BPT4]] Baseplate protein that is part of the baseplate wedge and that connects the short tail fibers to the baseplate (PubMed:16554069). During infection, the baseplate undergoes a conformational change from a dome-shaped to a star-shaped structure. At this point, gp10 rotates and acts as a lever that unfolds the short tail fibers, which then interact with host cell surface receptors. Involved in the tail assembly.<ref>PMID:16554069</ref> <ref>PMID:21129200</ref>	+	[https://www.uniprot.org/uniprot/BP06_BPT4 BP06_BPT4] Baseplate protein that is part of the baseplate wedge (PubMed:15315755). Involved in the tail assembly.<ref>PMID:15315755</ref> <ref>PMID:21129200</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 21:		Line 22:
	__TOC__		__TOC__
	</SX>		</SX>
-	[[Category: ~~Enterobacteria phage t4~~]]	+	[[Category: Escherichia virus T4]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Goldie~~, K N~~]]	+	[[Category: Goldie KN]]
-	[[Category: Guerrero-Ferreira~~, R C~~]]	+	[[Category: Guerrero-Ferreira RC]]
-	[[Category: Leiman~~, P G~~]]	+	[[Category: Leiman PG]]
-	[[Category: Stahlberg, H]]	+	[[Category: Stahlberg H]]
-	[[Category: Taylor~~, N M.I]]~~	+	[[Category: Taylor NMI]]
-	~~[[Category: Bacterial virus]]~~	+
-	~~[[Category: Bacteriophage]]~~	+
-	~~[[Category: Baseplate]]~~	+
-	~~[[Category: Cell attachment]]~~	+
-	~~[[Category: Hubless]]~~	+
-	~~[[Category: Infection]]~~	+
-	~~[[Category: Membrane-piercing]]~~	+
-	~~[[Category: Post-attachment]]~~	+
-	~~[[Category: Star-shaped]]~~	+
-	~~[[Category: T4]]~~	+
-	~~[[Category: Viral protein~~]]	+

OCA at 20:18, 10 April 2020

OCA — Fri, 10 Apr 2020 20:18:24 GMT

←Older revision		Revision as of 20:18, 10 April 2020
Line 3:		Line 3:
	<SX load='5iv7' size='340' side='right' viewer='molstar' caption='[[5iv7]], [[Resolution\|resolution]] 6.77Å' scene=''>		<SX load='5iv7' size='340' side='right' viewer='molstar' caption='[[5iv7]], [[Resolution\|resolution]] 6.77Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5iv7]] is a 96 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_t4 Enterobacteria phage t4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IV7 OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5IV7 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5iv7]] is a 96 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_t4 Enterobacteria phage t4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IV7 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5IV7 FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5iv7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5iv7 OCA], [http://pdbe.org/5iv7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5iv7 RCSB], [http://www.ebi.ac.uk/pdbsum/5iv7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5iv7 ProSAT]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5iv7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5iv7 OCA], [http://pdbe.org/5iv7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5iv7 RCSB], [http://www.ebi.ac.uk/pdbsum/5iv7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5iv7 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==

OCA at 18:36, 6 March 2020

OCA — Fri, 06 Mar 2020 18:36:42 GMT

←Older revision		Revision as of 18:36, 6 March 2020
Line 1:		Line 1:
-	~~{{Large structure}}~~	+
	==Cryo-electron microscopy structure of the star-shaped, hubless post-attachment T4 baseplate==		==Cryo-electron microscopy structure of the star-shaped, hubless post-attachment T4 baseplate==
-	<~~StructureSection~~ load='5iv7' size='340' side='right' caption='[[5iv7]], [[Resolution\|resolution]] 6.77Å' scene=''>	+	<SX load='5iv7' size='340' side='right' viewer='molstar' caption='[[5iv7]], [[Resolution\|resolution]] 6.77Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[5iv7]] is a 96 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_t4 Enterobacteria phage t4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IV7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5IV7 FirstGlance]. <br>		<table><tr><td colspan='2'>[[5iv7]] is a 96 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_t4 Enterobacteria phage t4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IV7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5IV7 FirstGlance]. <br>
	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5iv7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5iv7 OCA], [http://pdbe.org/5iv7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5iv7 RCSB], [http://www.ebi.ac.uk/pdbsum/5iv7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5iv7 ProSAT]</span></td></tr>		</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5iv7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5iv7 OCA], [http://pdbe.org/5iv7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5iv7 RCSB], [http://www.ebi.ac.uk/pdbsum/5iv7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5iv7 ProSAT]</span></td></tr>
	</table>		</table>
-	{{Large structure}}
	== Function ==		== Function ==
	[[http://www.uniprot.org/uniprot/BP11_BPT4 BP11_BPT4]] Baseplate protein that is part of the baseplate wedge and that connects the short tail fibers to the baseplate (PubMed:15315755). Involved in the tail assembly.<ref>PMID:15315755</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP08_BPT4 BP08_BPT4]] Baseplate protein that is part of the baseplate wedge. Involved in the tail assembly.<ref>PMID:15315755</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP25_BPT4 BP25_BPT4]] Baseplate protein that is part of the outer wedges of the baseplate (PubMed:15315755). Probably plays a role as a connector between the central and peripheral parts of the baseplate. Involved in the tail assembly.[UniProtKB:P51768]<ref>PMID:15315755</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP07_BPT4 BP07_BPT4]] Baseplate protein that is part of the baseplate wedge. Involved in the tail assembly.<ref>PMID:2254933</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP53_BPT4 BP53_BPT4]] Baseplate protein that is part of the baseplate wedge (PubMed:15315755). Involved in the tail assembly.<ref>PMID:15315755</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP06_BPT4 BP06_BPT4]] Baseplate protein that is part of the baseplate wedge (PubMed:15315755). Involved in the tail assembly.<ref>PMID:15315755</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP09_BPT4 BP09_BPT4]] Baseplate protein that connects the long tail fibers to the baseplate and probably triggers the tail contraction after virus attachment to a host cell (PubMed:10545330). Involved in the tail assembly (PubMed:21129200).<ref>PMID:10545330</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP10_BPT4 BP10_BPT4]] Baseplate protein that is part of the baseplate wedge and that connects the short tail fibers to the baseplate (PubMed:16554069). During infection, the baseplate undergoes a conformational change from a dome-shaped to a star-shaped structure. At this point, gp10 rotates and acts as a lever that unfolds the short tail fibers, which then interact with host cell surface receptors. Involved in the tail assembly.<ref>PMID:16554069</ref> <ref>PMID:21129200</ref>		[[http://www.uniprot.org/uniprot/BP11_BPT4 BP11_BPT4]] Baseplate protein that is part of the baseplate wedge and that connects the short tail fibers to the baseplate (PubMed:15315755). Involved in the tail assembly.<ref>PMID:15315755</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP08_BPT4 BP08_BPT4]] Baseplate protein that is part of the baseplate wedge. Involved in the tail assembly.<ref>PMID:15315755</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP25_BPT4 BP25_BPT4]] Baseplate protein that is part of the outer wedges of the baseplate (PubMed:15315755). Probably plays a role as a connector between the central and peripheral parts of the baseplate. Involved in the tail assembly.[UniProtKB:P51768]<ref>PMID:15315755</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP07_BPT4 BP07_BPT4]] Baseplate protein that is part of the baseplate wedge. Involved in the tail assembly.<ref>PMID:2254933</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP53_BPT4 BP53_BPT4]] Baseplate protein that is part of the baseplate wedge (PubMed:15315755). Involved in the tail assembly.<ref>PMID:15315755</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP06_BPT4 BP06_BPT4]] Baseplate protein that is part of the baseplate wedge (PubMed:15315755). Involved in the tail assembly.<ref>PMID:15315755</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP09_BPT4 BP09_BPT4]] Baseplate protein that connects the long tail fibers to the baseplate and probably triggers the tail contraction after virus attachment to a host cell (PubMed:10545330). Involved in the tail assembly (PubMed:21129200).<ref>PMID:10545330</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP10_BPT4 BP10_BPT4]] Baseplate protein that is part of the baseplate wedge and that connects the short tail fibers to the baseplate (PubMed:16554069). During infection, the baseplate undergoes a conformational change from a dome-shaped to a star-shaped structure. At this point, gp10 rotates and acts as a lever that unfolds the short tail fibers, which then interact with host cell surface receptors. Involved in the tail assembly.<ref>PMID:16554069</ref> <ref>PMID:21129200</ref>
Line 21:		Line 20:
	<references/>		<references/>
	__TOC__		__TOC__
-	</~~StructureSection~~>	+	</SX>
	[[Category: Enterobacteria phage t4]]		[[Category: Enterobacteria phage t4]]
		+	[[Category: Large Structures]]
	[[Category: Goldie, K N]]		[[Category: Goldie, K N]]
	[[Category: Guerrero-Ferreira, R C]]		[[Category: Guerrero-Ferreira, R C]]

OCA at 04:13, 30 August 2017

OCA — Wed, 30 Aug 2017 04:13:39 GMT

←Older revision		Revision as of 04:13, 30 August 2017
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[5iv7]] is a 96 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_t4 Enterobacteria phage t4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IV7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5IV7 FirstGlance]. <br>		<table><tr><td colspan='2'>[[5iv7]] is a 96 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_t4 Enterobacteria phage t4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IV7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5IV7 FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5iv7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5iv7 OCA], [http://pdbe.org/5iv7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5iv7 RCSB], [http://www.ebi.ac.uk/pdbsum/5iv7 PDBsum]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5iv7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5iv7 OCA], [http://pdbe.org/5iv7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5iv7 RCSB], [http://www.ebi.ac.uk/pdbsum/5iv7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5iv7 ProSAT]</span></td></tr>
	</table>		</table>
	{{Large structure}}		{{Large structure}}

OCA at 08:02, 20 June 2016

OCA — Mon, 20 Jun 2016 08:02:12 GMT

←Older revision		Revision as of 08:02, 20 June 2016
Line 9:		Line 9:
	== Function ==		== Function ==
	[[http://www.uniprot.org/uniprot/BP11_BPT4 BP11_BPT4]] Baseplate protein that is part of the baseplate wedge and that connects the short tail fibers to the baseplate (PubMed:15315755). Involved in the tail assembly.<ref>PMID:15315755</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP08_BPT4 BP08_BPT4]] Baseplate protein that is part of the baseplate wedge. Involved in the tail assembly.<ref>PMID:15315755</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP25_BPT4 BP25_BPT4]] Baseplate protein that is part of the outer wedges of the baseplate (PubMed:15315755). Probably plays a role as a connector between the central and peripheral parts of the baseplate. Involved in the tail assembly.[UniProtKB:P51768]<ref>PMID:15315755</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP07_BPT4 BP07_BPT4]] Baseplate protein that is part of the baseplate wedge. Involved in the tail assembly.<ref>PMID:2254933</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP53_BPT4 BP53_BPT4]] Baseplate protein that is part of the baseplate wedge (PubMed:15315755). Involved in the tail assembly.<ref>PMID:15315755</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP06_BPT4 BP06_BPT4]] Baseplate protein that is part of the baseplate wedge (PubMed:15315755). Involved in the tail assembly.<ref>PMID:15315755</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP09_BPT4 BP09_BPT4]] Baseplate protein that connects the long tail fibers to the baseplate and probably triggers the tail contraction after virus attachment to a host cell (PubMed:10545330). Involved in the tail assembly (PubMed:21129200).<ref>PMID:10545330</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP10_BPT4 BP10_BPT4]] Baseplate protein that is part of the baseplate wedge and that connects the short tail fibers to the baseplate (PubMed:16554069). During infection, the baseplate undergoes a conformational change from a dome-shaped to a star-shaped structure. At this point, gp10 rotates and acts as a lever that unfolds the short tail fibers, which then interact with host cell surface receptors. Involved in the tail assembly.<ref>PMID:16554069</ref> <ref>PMID:21129200</ref>		[[http://www.uniprot.org/uniprot/BP11_BPT4 BP11_BPT4]] Baseplate protein that is part of the baseplate wedge and that connects the short tail fibers to the baseplate (PubMed:15315755). Involved in the tail assembly.<ref>PMID:15315755</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP08_BPT4 BP08_BPT4]] Baseplate protein that is part of the baseplate wedge. Involved in the tail assembly.<ref>PMID:15315755</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP25_BPT4 BP25_BPT4]] Baseplate protein that is part of the outer wedges of the baseplate (PubMed:15315755). Probably plays a role as a connector between the central and peripheral parts of the baseplate. Involved in the tail assembly.[UniProtKB:P51768]<ref>PMID:15315755</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP07_BPT4 BP07_BPT4]] Baseplate protein that is part of the baseplate wedge. Involved in the tail assembly.<ref>PMID:2254933</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP53_BPT4 BP53_BPT4]] Baseplate protein that is part of the baseplate wedge (PubMed:15315755). Involved in the tail assembly.<ref>PMID:15315755</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP06_BPT4 BP06_BPT4]] Baseplate protein that is part of the baseplate wedge (PubMed:15315755). Involved in the tail assembly.<ref>PMID:15315755</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP09_BPT4 BP09_BPT4]] Baseplate protein that connects the long tail fibers to the baseplate and probably triggers the tail contraction after virus attachment to a host cell (PubMed:10545330). Involved in the tail assembly (PubMed:21129200).<ref>PMID:10545330</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP10_BPT4 BP10_BPT4]] Baseplate protein that is part of the baseplate wedge and that connects the short tail fibers to the baseplate (PubMed:16554069). During infection, the baseplate undergoes a conformational change from a dome-shaped to a star-shaped structure. At this point, gp10 rotates and acts as a lever that unfolds the short tail fibers, which then interact with host cell surface receptors. Involved in the tail assembly.<ref>PMID:16554069</ref> <ref>PMID:21129200</ref>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Several systems, including contractile tail bacteriophages, the type VI secretion system and R-type pyocins, use a multiprotein tubular apparatus to attach to and penetrate host cell membranes. This macromolecular machine resembles a stretched, coiled spring (or sheath) wound around a rigid tube with a spike-shaped protein at its tip. A baseplate structure, which is arguably the most complex part of this assembly, relays the contraction signal to the sheath. Here we present the atomic structure of the approximately 6-megadalton bacteriophage T4 baseplate in its pre- and post-host attachment states and explain the events that lead to sheath contraction in atomic detail. We establish the identity and function of a minimal set of components that is conserved in all contractile injection systems and show that the triggering mechanism is universally conserved.
		+
		+	Structure of the T4 baseplate and its function in triggering sheath contraction.,Taylor NM, Prokhorov NS, Guerrero-Ferreira RC, Shneider MM, Browning C, Goldie KN, Stahlberg H, Leiman PG Nature. 2016 May 18;533(7603):346-52. doi: 10.1038/nature17971. PMID:27193680<ref>PMID:27193680</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 5iv7" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 08:35, 1 June 2016

OCA — Wed, 01 Jun 2016 08:35:34 GMT

←Older revision		Revision as of 08:35, 1 June 2016
Line 1:		Line 1:
-	'''~~Unreleased structure~~'''	+	{{Large structure}}
-		+	==Cryo-electron microscopy structure of the star-shaped, hubless post-attachment T4 baseplate==
-	~~The entry~~ 5iv7 is ~~ON HOLD~~	+	<StructureSection load='5iv7' size='340' side='right' caption='[[5iv7]], [[Resolution\|resolution]] 6.77Å' scene=''>
-		+	== Structural highlights ==
-	~~Authors~~:	+	<table><tr><td colspan='2'>[[5iv7]] is a 96 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_t4 Enterobacteria phage t4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IV7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5IV7 FirstGlance]. <br>
-		+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5iv7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5iv7 OCA], [http://pdbe.org/5iv7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5iv7 RCSB], [http://www.ebi.ac.uk/pdbsum/5iv7 PDBsum]</span></td></tr>
-	~~Description~~:	+	</table>
-	[[Category: ~~Unreleased Structures~~]]	+	{{Large structure}}
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/BP11_BPT4 BP11_BPT4]] Baseplate protein that is part of the baseplate wedge and that connects the short tail fibers to the baseplate (PubMed:15315755). Involved in the tail assembly.<ref>PMID:15315755</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP08_BPT4 BP08_BPT4]] Baseplate protein that is part of the baseplate wedge. Involved in the tail assembly.<ref>PMID:15315755</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP25_BPT4 BP25_BPT4]] Baseplate protein that is part of the outer wedges of the baseplate (PubMed:15315755). Probably plays a role as a connector between the central and peripheral parts of the baseplate. Involved in the tail assembly.[UniProtKB:P51768]<ref>PMID:15315755</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP07_BPT4 BP07_BPT4]] Baseplate protein that is part of the baseplate wedge. Involved in the tail assembly.<ref>PMID:2254933</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP53_BPT4 BP53_BPT4]] Baseplate protein that is part of the baseplate wedge (PubMed:15315755). Involved in the tail assembly.<ref>PMID:15315755</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP06_BPT4 BP06_BPT4]] Baseplate protein that is part of the baseplate wedge (PubMed:15315755). Involved in the tail assembly.<ref>PMID:15315755</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP09_BPT4 BP09_BPT4]] Baseplate protein that connects the long tail fibers to the baseplate and probably triggers the tail contraction after virus attachment to a host cell (PubMed:10545330). Involved in the tail assembly (PubMed:21129200).<ref>PMID:10545330</ref> <ref>PMID:21129200</ref> [[http://www.uniprot.org/uniprot/BP10_BPT4 BP10_BPT4]] Baseplate protein that is part of the baseplate wedge and that connects the short tail fibers to the baseplate (PubMed:16554069). During infection, the baseplate undergoes a conformational change from a dome-shaped to a star-shaped structure. At this point, gp10 rotates and acts as a lever that unfolds the short tail fibers, which then interact with host cell surface receptors. Involved in the tail assembly.<ref>PMID:16554069</ref> <ref>PMID:21129200</ref>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Enterobacteria phage t4]]
		+	[[Category: Goldie, K N]]
		+	[[Category: Guerrero-Ferreira, R C]]
		+	[[Category: Leiman, P G]]
		+	[[Category: Stahlberg, H]]
		+	[[Category: Taylor, N M.I]]
		+	[[Category: Bacterial virus]]
		+	[[Category: Bacteriophage]]
		+	[[Category: Baseplate]]
		+	[[Category: Cell attachment]]
		+	[[Category: Hubless]]
		+	[[Category: Infection]]
		+	[[Category: Membrane-piercing]]
		+	[[Category: Post-attachment]]
		+	[[Category: Star-shaped]]
		+	[[Category: T4]]
		+	[[Category: Viral protein]]

OCA at 14:46, 15 May 2016

OCA — Sun, 15 May 2016 14:46:48 GMT

←Older revision		Revision as of 14:46, 15 May 2016
Line 3:		Line 3:
	The entry 5iv7 is ON HOLD		The entry 5iv7 is ON HOLD

-	Authors: ~~Taylor, N.M.I., Guerrero-Ferreira, R.C., Goldie, K.N., Stahlberg, H., Leiman, P.G.~~	+	Authors:

	Description:		Description:
	[[Category: Unreleased Structures]]		[[Category: Unreleased Structures]]
-	[[Category: Goldie, K.N]]
-	[[Category: Guerrero-Ferreira, R.C]]
-	[[Category: Leiman, P.G]]
-	[[Category: Taylor, N.M.I]]
-	[[Category: Stahlberg, H]]

OCA: Protected "5iv7" [edit=sysop:move=sysop]

OCA — Wed, 11 May 2016 01:00:54 GMT

Protected "5iv7" [edit=sysop:move=sysop]

←Older revision

Revision as of 01:00, 11 May 2016

OCA: New page: '''Unreleased structure''' The entry 5iv7 is ON HOLD Authors: Taylor, N.M.I., Guerrero-Ferreira, R.C., Goldie, K.N., Stahlberg, H., Leiman, P.G. Description: [[Category: Unreleased St...

OCA — Wed, 11 May 2016 01:00:52 GMT

New page: '''Unreleased structure''' The entry 5iv7 is ON HOLD Authors: Taylor, N.M.I., Guerrero-Ferreira, R.C., Goldie, K.N., Stahlberg, H., Leiman, P.G. Description: [[Category: Unreleased St...

New page

'''Unreleased structure'''

The entry 5iv7 is ON HOLD

Authors: Taylor, N.M.I., Guerrero-Ferreira, R.C., Goldie, K.N., Stahlberg, H., Leiman, P.G.

Description:
[[Category: Unreleased Structures]]
[[Category: Goldie, K.N]]
[[Category: Guerrero-Ferreira, R.C]]
[[Category: Leiman, P.G]]
[[Category: Taylor, N.M.I]]
[[Category: Stahlberg, H]]