5j77 - Revision history

OCA at 10:51, 6 September 2023

OCA — Wed, 06 Sep 2023 10:51:50 GMT

←Older revision		Revision as of 10:51, 6 September 2023
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	<StructureSection load='5j77' size='340' side='right'caption='[[5j77]], [[Resolution\|resolution]] 2.10Å' scene=''>		<StructureSection load='5j77' size='340' side='right'caption='[[5j77]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5j77]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Theac Theac~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5J77 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=5J77 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5j77]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermoplasma_acidophilum_DSM_1728 Thermoplasma acidophilum DSM 1728]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5J77 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5J77 FirstGlance]. <br>
-	</td></tr><tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat"~~>Ta0809 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&~~id~~=273075 THEAC])</td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.1Å</td></tr>
-	~~<tr id='activity'><td class~~="~~sblockLbl~~">~~<b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/D~~-~~glyceraldehyde_dehydrogenase_(NADP(+)) D-glyceraldehyde dehydrogenase (NADP(+))]~~, ~~with EC number~~ [~~http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.~~2.1~~.89 1.2.1.89] </span>~~</td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5j77 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5j77 OCA], [https://pdbe.org/5j77 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5j77 RCSB], [https://www.ebi.ac.uk/pdbsum/5j77 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5j77 ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=5j77 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5j77 OCA], [~~http~~://pdbe.org/5j77 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5j77 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5j77 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5j77 ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/GADH_THEAC GADH_THEAC]] NADP-dependent dehydrogenase of the nED (non-phosphorylated Entner-Doudoroff) pathway with highest activity towards glyceraldehydes (e.g. D,L-glyceraldehyde and D-glyceraldehyde), to a lesser extent towards D,L-glyceraldehyde-3-phosphate and glycolaldehyde, but no activity towards aliphatic or aromatic aldehydes.<ref>PMID:16458304</ref> <ref>PMID:16566751</ref>	+	[https://www.uniprot.org/uniprot/GADH_THEAC GADH_THEAC] NADP-dependent dehydrogenase of the nED (non-phosphorylated Entner-Doudoroff) pathway with highest activity towards glyceraldehydes (e.g. D,L-glyceraldehyde and D-glyceraldehyde), to a lesser extent towards D,L-glyceraldehyde-3-phosphate and glycolaldehyde, but no activity towards aliphatic or aromatic aldehydes.<ref>PMID:16458304</ref> <ref>PMID:16566751</ref>
	== References ==		== References ==
	<references/>		<references/>
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	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Theac~~]]	+	[[Category: Thermoplasma acidophilum DSM 1728]]
-	[[Category: Iermak, I]]	+	[[Category: Iermak I]]
-	[[Category: ~~Mesters, J R]]~~	+	[[Category: Kuta Smatanova I]]
-	~~[[Category:~~ Smatanova, I ~~Kuta~~]]	+	[[Category: Mesters JR]]
-	[[Category: ~~Nadp-dependent dehydrogenase]]~~	+
-	~~[[Category: Oxidoreductase~~]]	+

OCA at 07:31, 10 June 2020

OCA — Wed, 10 Jun 2020 07:31:48 GMT

←Older revision		Revision as of 07:31, 10 June 2020
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	==Mutant glyceraldehyde dehydrogenase (F34M+S405N) from Thermoplasma acidophilum==		==Mutant glyceraldehyde dehydrogenase (F34M+S405N) from Thermoplasma acidophilum==
-	<StructureSection load='5j77' size='340' side='right' caption='[[5j77]], [[Resolution\|resolution]] 2.10Å' scene=''>	+	<StructureSection load='5j77' size='340' side='right'caption='[[5j77]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5j77]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5J77 OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5J77 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5j77]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Theac Theac]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5J77 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5J77 FirstGlance]. <br>
-	</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/D-glyceraldehyde_dehydrogenase_(NADP(+)) D-glyceraldehyde dehydrogenase (NADP(+))], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.2.1.89 1.2.1.89] </span></td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Ta0809 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=273075 THEAC])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5j77 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5j77 OCA], [http://pdbe.org/5j77 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5j77 RCSB], [http://www.ebi.ac.uk/pdbsum/5j77 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5j77 ProSAT]</span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/D-glyceraldehyde_dehydrogenase_(NADP(+)) D-glyceraldehyde dehydrogenase (NADP(+))], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.2.1.89 1.2.1.89] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5j77 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5j77 OCA], [http://pdbe.org/5j77 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5j77 RCSB], [http://www.ebi.ac.uk/pdbsum/5j77 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5j77 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
		+	[[Category: Theac]]
	[[Category: Iermak, I]]		[[Category: Iermak, I]]
	[[Category: Mesters, J R]]		[[Category: Mesters, J R]]

OCA at 12:56, 10 May 2017

OCA — Wed, 10 May 2017 12:56:06 GMT

←Older revision		Revision as of 12:56, 10 May 2017
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-	'''Unreleased structure'''

-	~~The entry~~ 5j77 ~~is ON HOLD until Paper Publication~~	+	==Mutant glyceraldehyde dehydrogenase (F34M+S405N) from Thermoplasma acidophilum==
-		+	<StructureSection load='5j77' size='340' side='right' caption='[[5j77]], [[Resolution\|resolution]] 2.10Å' scene=''>
-	~~Authors~~: ~~Iermak, I~~.~~, Mesters, J~~.R.~~, Kuta Smatanova, I~~.	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[5j77]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5J77 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5J77 FirstGlance]. <br>
-	~~Description~~: ~~Mutant~~ glyceraldehyde dehydrogenase (~~F34M~~+~~S405N~~) ~~from Thermoplasma acidophilum~~	+	</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/D-glyceraldehyde_dehydrogenase_(NADP(+)) D-glyceraldehyde dehydrogenase (NADP(+))], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.2.1.89 1.2.1.89] </span></td></tr>
-	[[~~Category~~: ~~Unreleased Structures~~]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5j77 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5j77 OCA], [http://pdbe.org/5j77 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5j77 RCSB], [http://www.ebi.ac.uk/pdbsum/5j77 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5j77 ProSAT]</span></td></tr>
-	[[~~Category~~: ~~Mesters~~, J.R]]	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/GADH_THEAC GADH_THEAC]] NADP-dependent dehydrogenase of the nED (non-phosphorylated Entner-Doudoroff) pathway with highest activity towards glyceraldehydes (e.g. D,L-glyceraldehyde and D-glyceraldehyde), to a lesser extent towards D,L-glyceraldehyde-3-phosphate and glycolaldehyde, but no activity towards aliphatic or aromatic aldehydes.<ref>PMID:16458304</ref> <ref>PMID:16566751</ref>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
	[[Category: Iermak, I]]		[[Category: Iermak, I]]
-	[[Category: ~~Kuta~~ Smatanova, I]]	+	[[Category: Mesters, J R]]
		+	[[Category: Smatanova, I Kuta]]
		+	[[Category: Nadp-dependent dehydrogenase]]
		+	[[Category: Oxidoreductase]]

OCA at 09:48, 9 March 2017

OCA — Thu, 09 Mar 2017 09:48:18 GMT

←Older revision		Revision as of 09:48, 9 March 2017
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	Description: Mutant glyceraldehyde dehydrogenase (F34M+S405N) from Thermoplasma acidophilum		Description: Mutant glyceraldehyde dehydrogenase (F34M+S405N) from Thermoplasma acidophilum
	[[Category: Unreleased Structures]]		[[Category: Unreleased Structures]]
		+	[[Category: Mesters, J.R]]
	[[Category: Iermak, I]]		[[Category: Iermak, I]]
	[[Category: Kuta Smatanova, I]]		[[Category: Kuta Smatanova, I]]
-	[[Category: Mesters, J.R]]

OCA: Protected "5j77" [edit=sysop:move=sysop]

OCA — Wed, 11 May 2016 01:36:10 GMT

Protected "5j77" [edit=sysop:move=sysop]

←Older revision

Revision as of 01:36, 11 May 2016

OCA: New page: '''Unreleased structure''' The entry 5j77 is ON HOLD until Paper Publication Authors: Iermak, I., Mesters, J.R., Kuta Smatanova, I. Description: Mutant glyceraldehyde dehydrogenase (F3...

OCA — Wed, 11 May 2016 01:36:09 GMT

New page: '''Unreleased structure''' The entry 5j77 is ON HOLD until Paper Publication Authors: Iermak, I., Mesters, J.R., Kuta Smatanova, I. Description: Mutant glyceraldehyde dehydrogenase (F3...

New page

'''Unreleased structure'''

The entry 5j77 is ON HOLD until Paper Publication

Authors: Iermak, I., Mesters, J.R., Kuta Smatanova, I.

Description: Mutant glyceraldehyde dehydrogenase (F34M+S405N) from Thermoplasma acidophilum
[[Category: Unreleased Structures]]
[[Category: Iermak, I]]
[[Category: Kuta Smatanova, I]]
[[Category: Mesters, J.R]]