5j7m - Revision history

OCA at 10:52, 6 September 2023

OCA — Wed, 06 Sep 2023 10:52:29 GMT

←Older revision		Revision as of 10:52, 6 September 2023
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	<StructureSection load='5j7m' size='340' side='right'caption='[[5j7m]], [[Resolution\|resolution]] 2.07Å' scene=''>		<StructureSection load='5j7m' size='340' side='right'caption='[[5j7m]], [[Resolution\|resolution]] 2.07Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5j7m]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Krifd Krifd~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5J7M OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5J7M FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5j7m]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Kribbella_flavida_DSM_17836 Kribbella flavida DSM 17836]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5J7M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5J7M FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat"~~><scene name~~=~~'pdbligand=ACT:ACETATE+ION'>ACT</scene~~>, ~~<scene name='pdbligand=EOH:ETHANOL'>EOH</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.07Å</td></tr>
-	<tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"><scene name='pdbligand=~~MSE~~:~~SELENOMETHIONINE~~'>~~MSE~~</scene><~~/td~~></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=EOH:ETHANOL'>EOH</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
-	<~~tr id~~='~~gene~~'><~~td class="sblockLbl"~~><~~b>[[Gene\|Gene~~:~~]]</b~~></td><~~td class~~=~~"sblockDat"~~>~~Kfla_2934 ([http:~~/~~/www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=479435 KRIFD])~~</td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5j7m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5j7m OCA], [https://pdbe.org/5j7m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5j7m RCSB], [https://www.ebi.ac.uk/pdbsum/5j7m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5j7m ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5j7m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5j7m OCA], [~~http~~://pdbe.org/5j7m PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5j7m RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5j7m PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5j7m ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/D2Q1L0_KRIFD D2Q1L0_KRIFD]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Krifd~~]]	+	[[Category: Kribbella flavida DSM 17836]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Chang, C]]	+	[[Category: Chang C]]
-	[[Category: Chhor, G]]	+	[[Category: Chhor G]]
-	[[Category: Cuff, M]]	+	[[Category: Cuff M]]
-	[[Category: Endres, M]]	+	[[Category: Endres M]]
-	[[Category: Joachimiak, A]]	+	[[Category: Joachimiak A]]
-	~~[[Category: Cupin 2 conserved barrel domain]]~~	+
-	~~[[Category: Unknown function~~]]	+

OCA at 11:59, 25 December 2019

OCA — Wed, 25 Dec 2019 11:59:39 GMT

←Older revision		Revision as of 11:59, 25 December 2019
Line 1:		Line 1:

	==Crystal structure of Cupin 2 conserved barrel domain protein from Kribbella flavida DSM 17836==		==Crystal structure of Cupin 2 conserved barrel domain protein from Kribbella flavida DSM 17836==
-	<StructureSection load='5j7m' size='340' side='right' caption='[[5j7m]], [[Resolution\|resolution]] 2.07Å' scene=''>	+	<StructureSection load='5j7m' size='340' side='right'caption='[[5j7m]], [[Resolution\|resolution]] 2.07Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[5j7m]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Krifd Krifd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5J7M OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5J7M FirstGlance]. <br>		<table><tr><td colspan='2'>[[5j7m]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Krifd Krifd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5J7M OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5J7M FirstGlance]. <br>
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	</StructureSection>		</StructureSection>
	[[Category: Krifd]]		[[Category: Krifd]]
		+	[[Category: Large Structures]]
	[[Category: Chang, C]]		[[Category: Chang, C]]
	[[Category: Chhor, G]]		[[Category: Chhor, G]]

OCA at 17:52, 15 November 2017

OCA — Wed, 15 Nov 2017 17:52:03 GMT

←Older revision		Revision as of 17:52, 15 November 2017
Line 3:		Line 3:
	<StructureSection load='5j7m' size='340' side='right' caption='[[5j7m]], [[Resolution\|resolution]] 2.07Å' scene=''>		<StructureSection load='5j7m' size='340' side='right' caption='[[5j7m]], [[Resolution\|resolution]] 2.07Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5j7m]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5J7M OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5J7M FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5j7m]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Krifd Krifd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5J7M OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5J7M FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=EOH:ETHANOL'>EOH</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=EOH:ETHANOL'>EOH</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Kfla_2934 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=479435 KRIFD])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5j7m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5j7m OCA], [http://pdbe.org/5j7m PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5j7m RCSB], [http://www.ebi.ac.uk/pdbsum/5j7m PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5j7m ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5j7m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5j7m OCA], [http://pdbe.org/5j7m PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5j7m RCSB], [http://www.ebi.ac.uk/pdbsum/5j7m PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5j7m ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Krifd]]
	[[Category: Chang, C]]		[[Category: Chang, C]]
	[[Category: Chhor, G]]		[[Category: Chhor, G]]

OCA at 05:18, 9 September 2016

OCA — Fri, 09 Sep 2016 05:18:55 GMT

←Older revision		Revision as of 05:18, 9 September 2016
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	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=EOH:ETHANOL'>EOH</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=EOH:ETHANOL'>EOH</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5j7m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5j7m OCA], [http://pdbe.org/5j7m PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5j7m RCSB], [http://www.ebi.ac.uk/pdbsum/5j7m PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5j7m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5j7m OCA], [http://pdbe.org/5j7m PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5j7m RCSB], [http://www.ebi.ac.uk/pdbsum/5j7m PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5j7m ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__
Line 15:		Line 15:
	[[Category: Endres, M]]		[[Category: Endres, M]]
	[[Category: Joachimiak, A]]		[[Category: Joachimiak, A]]
-	[[Category: Structural genomic]]
	[[Category: Cupin 2 conserved barrel domain]]		[[Category: Cupin 2 conserved barrel domain]]
-	[[Category: Mcsg]]
-	[[Category: Psi-biology]]
	[[Category: Unknown function]]		[[Category: Unknown function]]

OCA: Protected "5j7m" [edit=sysop:move=sysop]

OCA — Fri, 13 May 2016 12:09:59 GMT

Protected "5j7m" [edit=sysop:move=sysop]

←Older revision

Revision as of 12:09, 13 May 2016

OCA: New page: ==Crystal structure of Cupin 2 conserved barrel domain protein from Kribbella flavida DSM 17836== == Structural highlights ==
<table><tr><td colspan='2'>[[5j7m]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5J7M OCA]. For a guided tour on the structure components use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5J7M FirstGlance]. 
</td></tr><tr id='ligand'><td class="sblockLbl">[[Ligand|Ligands:]]</td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=EOH:ETHANOL'>EOH</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
<tr id='NonStdRes'><td class="sblockLbl">[[Non-Standard_Residue|NonStd Res:]]</td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5j7m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5j7m OCA], [http://pdbe.org/5j7m PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5j7m RCSB], [http://www.ebi.ac.uk/pdbsum/5j7m PDBsum]</td></tr>
</table>
TOC
</StructureSection>
[[Category: Chang, C]]
[[Category: Chhor, G]]
[[Category: Cuff, M]]
[[Category: Endres, M]]
[[Category: Joachimiak, A]]
[[Category: Structural genomic]]
[[Category: Cupin 2 conserved barrel domain]]
[[Category: Mcsg]]
[[Category: Psi-biology]]
[[Category: Unknown function]]