5j7u - Revision history

OCA at 10:52, 6 September 2023

OCA — Wed, 06 Sep 2023 10:52:42 GMT

←Older revision		Revision as of 10:52, 6 September 2023
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	<StructureSection load='5j7u' size='340' side='right'caption='[[5j7u]], [[Resolution\|resolution]] 2.44Å' scene=''>		<StructureSection load='5j7u' size='340' side='right'caption='[[5j7u]], [[Resolution\|resolution]] 2.44Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5j7u]] is a 24 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Faustovirus Faustovirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5J7U OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=5J7U FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5j7u]] is a 24 chain structure with sequence from [https://en.wikipedia.org/wiki/Faustovirus Faustovirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5J7U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5J7U FirstGlance]. <br>
-	</td></tr><tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"~~><scene name='pdbligand=UNK:UNKNOWN'>UNK</scene></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.44Å</td></tr>
-	~~<tr~~ id~~='related'><td class~~="~~sblockLbl~~">~~<b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5j7v\|5j7v]]~~, [[~~5j7o~~\|~~5j7o~~]]</td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5j7u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5j7u OCA], [https://pdbe.org/5j7u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5j7u RCSB], [https://www.ebi.ac.uk/pdbsum/5j7u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5j7u ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=5j7u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5j7u OCA], [~~http~~://pdbe.org/5j7u PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5j7u RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5j7u PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5j7u ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/A0A0H3TLP8_9VIRU A0A0H3TLP8_9VIRU]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 23:		Line 24:
	[[Category: Faustovirus]]		[[Category: Faustovirus]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Klose, T]]	+	[[Category: Klose T]]
-	[[Category: Rossmann~~, M G]]~~	+	[[Category: Rossmann MG]]
-	~~[[Category: Capsid]]~~	+
-	~~[[Category: Double jelly-roll]]~~	+
-	~~[[Category: Viral protein]]~~	+
-	~~[[Category: Virus~~]]	+

OCA at 07:32, 10 June 2020

OCA — Wed, 10 Jun 2020 07:32:39 GMT

←Older revision		Revision as of 07:32, 10 June 2020
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-	~~{{Large structure}}~~	+
	==Faustovirus major capsid protein==		==Faustovirus major capsid protein==
-	<StructureSection load='5j7u' size='340' side='right' caption='[[5j7u]], [[Resolution\|resolution]] 2.44Å' scene=''>	+	<StructureSection load='5j7u' size='340' side='right'caption='[[5j7u]], [[Resolution\|resolution]] 2.44Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5j7u]] is a 24 chain structure with sequence from [http://en.wikipedia.org/wiki/Faustovirus Faustovirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5J7U OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5J7U FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5j7u]] is a 24 chain structure with sequence from [http://en.wikipedia.org/wiki/Faustovirus Faustovirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5J7U OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5J7U FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNK:UNKNOWN'>UNK</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNK:UNKNOWN'>UNK</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5j7v\|5j7v]], [[5j7o\|5j7o]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5j7v\|5j7v]], [[5j7o\|5j7o]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5j7u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5j7u OCA], [http://pdbe.org/5j7u PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5j7u RCSB], [http://www.ebi.ac.uk/pdbsum/5j7u PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5j7u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5j7u OCA], [http://pdbe.org/5j7u PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5j7u RCSB], [http://www.ebi.ac.uk/pdbsum/5j7u PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5j7u ProSAT]</span></td></tr>
	</table>		</table>
-	{{Large structure}}
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 23:		Line 22:
	</StructureSection>		</StructureSection>
	[[Category: Faustovirus]]		[[Category: Faustovirus]]
		+	[[Category: Large Structures]]
	[[Category: Klose, T]]		[[Category: Klose, T]]
	[[Category: Rossmann, M G]]		[[Category: Rossmann, M G]]

OCA at 15:42, 1 June 2016

OCA — Wed, 01 Jun 2016 15:42:04 GMT

←Older revision		Revision as of 15:42, 1 June 2016
Line 1:		Line 1:
-		+	{{Large structure}}
	==Faustovirus major capsid protein==		==Faustovirus major capsid protein==
	<StructureSection load='5j7u' size='340' side='right' caption='[[5j7u]], [[Resolution\|resolution]] 2.44Å' scene=''>		<StructureSection load='5j7u' size='340' side='right' caption='[[5j7u]], [[Resolution\|resolution]] 2.44Å' scene=''>
Line 8:		Line 8:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5j7u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5j7u OCA], [http://pdbe.org/5j7u PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5j7u RCSB], [http://www.ebi.ac.uk/pdbsum/5j7u PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5j7u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5j7u OCA], [http://pdbe.org/5j7u PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5j7u RCSB], [http://www.ebi.ac.uk/pdbsum/5j7u PDBsum]</span></td></tr>
	</table>		</table>
		+	{{Large structure}}
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==

OCA at 07:52, 1 June 2016

OCA — Wed, 01 Jun 2016 07:52:32 GMT

←Older revision		Revision as of 07:52, 1 June 2016
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry~~ 5j7u is ~~ON HOLD until Paper~~ Publication	+	==Faustovirus major capsid protein==
		+	<StructureSection load='5j7u' size='340' side='right' caption='[[5j7u]], [[Resolution\|resolution]] 2.44Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[5j7u]] is a 24 chain structure with sequence from [http://en.wikipedia.org/wiki/Faustovirus Faustovirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5J7U OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5J7U FirstGlance]. <br>
		+	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNK:UNKNOWN'>UNK</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5j7v\|5j7v]], [[5j7o\|5j7o]]</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5j7u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5j7u OCA], [http://pdbe.org/5j7u PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5j7u RCSB], [http://www.ebi.ac.uk/pdbsum/5j7u PDBsum]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Many viruses protect their genome with a combination of a protein shell with or without a membrane layer. Here we describe the structure of faustovirus, the first DNA virus (to our knowledge) that has been found to use two protein shells to encapsidate and protect its genome. The crystal structure of the major capsid protein, in combination with cryo-electron microscopy structures of two different maturation stages of the virus, shows that the outer virus shell is composed of a double jelly-roll protein that can be found in many double-stranded DNA viruses. The structure of the repeating hexameric unit of the inner shell is different from all other known capsid proteins. In addition to the unique architecture, the region of the genome that encodes the major capsid protein stretches over 17,000 bp and contains a large number of introns and exons. This complexity might help the virus to rapidly adapt to new environments or hosts.

-	~~Authors: Klose~~, T., ~~Rossmann~~, M.G.	+	Structure of faustovirus, a large dsDNA virus.,Klose T, Reteno DG, Benamar S, Hollerbach A, Colson P, La Scola B, Rossmann MG Proc Natl Acad Sci U S A. 2016 May 16. pii: 201523999. PMID:27185929<ref>PMID:27185929</ref>

-	~~Description: Faustovirus major capsid protein~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	~~[[Category~~: ~~Unreleased Structures]]~~	+	</div>
-	[[Category: ~~Rossmann, M.G~~]]	+	<div class="pdbe-citations 5j7u" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Faustovirus]]
	[[Category: Klose, T]]		[[Category: Klose, T]]
		+	[[Category: Rossmann, M G]]
		+	[[Category: Capsid]]
		+	[[Category: Double jelly-roll]]
		+	[[Category: Viral protein]]
		+	[[Category: Virus]]

OCA: Protected "5j7u" [edit=sysop:move=sysop]

OCA — Wed, 11 May 2016 01:38:44 GMT

Protected "5j7u" [edit=sysop:move=sysop]

←Older revision

Revision as of 01:38, 11 May 2016

OCA: New page: '''Unreleased structure''' The entry 5j7u is ON HOLD until Paper Publication Authors: Klose, T., Rossmann, M.G. Description: Faustovirus major capsid protein [[Category: Unreleased Str...

OCA — Wed, 11 May 2016 01:38:43 GMT

New page: '''Unreleased structure''' The entry 5j7u is ON HOLD until Paper Publication Authors: Klose, T., Rossmann, M.G. Description: Faustovirus major capsid protein [[Category: Unreleased Str...

New page

'''Unreleased structure'''

The entry 5j7u is ON HOLD until Paper Publication

Authors: Klose, T., Rossmann, M.G.

Description: Faustovirus major capsid protein
[[Category: Unreleased Structures]]
[[Category: Rossmann, M.G]]
[[Category: Klose, T]]