5jmu - Revision history

OCA at 18:58, 20 September 2023

OCA — Wed, 20 Sep 2023 18:58:58 GMT

←Older revision		Revision as of 18:58, 20 September 2023
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	<StructureSection load='5jmu' size='340' side='right'caption='[[5jmu]], [[Resolution\|resolution]] 1.54Å' scene=''>		<StructureSection load='5jmu' size='340' side='right'caption='[[5jmu]], [[Resolution\|resolution]] 1.54Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5jmu]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Agarv Agarv~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JMU OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5JMU FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5jmu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Eubacterium_rectale_ATCC_33656 Eubacterium rectale ATCC 33656]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JMU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5JMU FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat"~~><scene name~~=~~'pdbligand=ACT:ACETATE+ION'>ACT</scene~~>, ~~<scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.54Å</td></tr>
-	<tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"><scene name='pdbligand=~~MSE~~:~~SELENOMETHIONINE~~'>~~MSE~~</scene>, <scene name='pdbligand=~~OCS~~:~~CYSTEINESULFONIC~~+~~ACID~~'>~~OCS~~</scene><~~/td~~></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=OCS:CYSTEINESULFONIC+ACID'>OCS</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	<~~tr id~~='~~gene~~'><~~td class="sblockLbl"~~><~~b>[[Gene\|Gene~~:~~]]</b~~></td>~~<td class="sblockDat">EUBREC_2389 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=515619 AGARV])~~</td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5jmu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jmu OCA], [https://pdbe.org/5jmu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5jmu RCSB], [https://www.ebi.ac.uk/pdbsum/5jmu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5jmu ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5jmu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jmu OCA], [~~http~~://pdbe.org/5jmu PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5jmu RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5jmu PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5jmu ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/C4ZEZ9_AGARV C4ZEZ9_AGARV]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Agarv]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Clancy, S]]	+	[[Category: Clancy S]]
-	[[Category: Gu, M]]	+	[[Category: Gu M]]
-	[[Category: Joachimiak, A]]	+	[[Category: Joachimiak A]]
-	[[Category: Tan, K]]	+	[[Category: Tan K]]
-	~~[[Category: Hydrolase]]~~	+
-	~~[[Category: Peptidoglycan n-acetylglucosamine deacetylase~~]]	+

OCA at 12:04, 25 December 2019

OCA — Wed, 25 Dec 2019 12:04:26 GMT

←Older revision		Revision as of 12:04, 25 December 2019
Line 1:		Line 1:

	==The crystal structure of the catalytic domain of peptidoglycan N-acetylglucosamine deacetylase from Eubacterium rectale ATCC 33656==		==The crystal structure of the catalytic domain of peptidoglycan N-acetylglucosamine deacetylase from Eubacterium rectale ATCC 33656==
-	<StructureSection load='5jmu' size='340' side='right' caption='[[5jmu]], [[Resolution\|resolution]] 1.54Å' scene=''>	+	<StructureSection load='5jmu' size='340' side='right'caption='[[5jmu]], [[Resolution\|resolution]] 1.54Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[5jmu]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Agarv Agarv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JMU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5JMU FirstGlance]. <br>		<table><tr><td colspan='2'>[[5jmu]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Agarv Agarv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JMU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5JMU FirstGlance]. <br>
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	</StructureSection>		</StructureSection>
	[[Category: Agarv]]		[[Category: Agarv]]
		+	[[Category: Large Structures]]
	[[Category: Clancy, S]]		[[Category: Clancy, S]]
	[[Category: Gu, M]]		[[Category: Gu, M]]

OCA at 12:55, 6 November 2017

OCA — Mon, 06 Nov 2017 12:55:37 GMT

←Older revision		Revision as of 12:55, 6 November 2017
Line 3:		Line 3:
	<StructureSection load='5jmu' size='340' side='right' caption='[[5jmu]], [[Resolution\|resolution]] 1.54Å' scene=''>		<StructureSection load='5jmu' size='340' side='right' caption='[[5jmu]], [[Resolution\|resolution]] 1.54Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5jmu]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JMU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5JMU FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5jmu]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Agarv Agarv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JMU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5JMU FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=OCS:CYSTEINESULFONIC+ACID'>OCS</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=OCS:CYSTEINESULFONIC+ACID'>OCS</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">EUBREC_2389 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=515619 AGARV])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5jmu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jmu OCA], [http://pdbe.org/5jmu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5jmu RCSB], [http://www.ebi.ac.uk/pdbsum/5jmu PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5jmu ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5jmu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jmu OCA], [http://pdbe.org/5jmu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5jmu RCSB], [http://www.ebi.ac.uk/pdbsum/5jmu PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5jmu ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Agarv]]
	[[Category: Clancy, S]]		[[Category: Clancy, S]]
	[[Category: Gu, M]]		[[Category: Gu, M]]

OCA at 10:27, 13 July 2016

OCA — Wed, 13 Jul 2016 10:27:35 GMT

←Older revision		Revision as of 10:27, 13 July 2016
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry 5jmu is ON HOLD until Jun 24 2017~~	+	==The crystal structure of the catalytic domain of peptidoglycan N-acetylglucosamine deacetylase from Eubacterium rectale ATCC 33656==
-		+	<StructureSection load='5jmu' size='340' side='right' caption='[[5jmu]], [[Resolution\|resolution]] 1.54Å' scene=''>
-	~~Authors: Tan, K., Gu, M., Clancy, S., Joachimiak, A.~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[5jmu]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JMU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5JMU FirstGlance]. <br>
-	~~Description:~~ The crystal structure of the catalytic domain of peptidoglycan N-acetylglucosamine deacetylase from Eubacterium rectale ATCC 33656 ~~(CASP target)~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	[[~~Category~~: ~~Unreleased Structures~~]]	+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=OCS:CYSTEINESULFONIC+ACID'>OCS</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5jmu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jmu OCA], [http://pdbe.org/5jmu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5jmu RCSB], [http://www.ebi.ac.uk/pdbsum/5jmu PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5jmu ProSAT]</span></td></tr>
		+	</table>
		+	__TOC__
		+	</StructureSection>
	[[Category: Clancy, S]]		[[Category: Clancy, S]]
		+	[[Category: Gu, M]]
	[[Category: Joachimiak, A]]		[[Category: Joachimiak, A]]
	[[Category: Tan, K]]		[[Category: Tan, K]]
-	[[Category: ~~Gu, M~~]]	+	[[Category: Hydrolase]]
		+	[[Category: Peptidoglycan n-acetylglucosamine deacetylase]]

OCA: Protected "5jmu" [edit=sysop:move=sysop]

OCA — Sun, 15 May 2016 15:36:08 GMT

Protected "5jmu" [edit=sysop:move=sysop]

←Older revision

Revision as of 15:36, 15 May 2016

OCA: New page: '''Unreleased structure''' The entry 5jmu is ON HOLD until Jun 24 2017 Authors: Tan, K., Gu, M., Clancy, S., Joachimiak, A. Description: The crystal structure of the catalytic domain o...

OCA — Sun, 15 May 2016 15:36:07 GMT

New page: '''Unreleased structure''' The entry 5jmu is ON HOLD until Jun 24 2017 Authors: Tan, K., Gu, M., Clancy, S., Joachimiak, A. Description: The crystal structure of the catalytic domain o...

New page

'''Unreleased structure'''

The entry 5jmu is ON HOLD until Jun 24 2017

Authors: Tan, K., Gu, M., Clancy, S., Joachimiak, A.

Description: The crystal structure of the catalytic domain of peptidoglycan N-acetylglucosamine deacetylase from Eubacterium rectale ATCC 33656 (CASP target)
[[Category: Unreleased Structures]]
[[Category: Clancy, S]]
[[Category: Joachimiak, A]]
[[Category: Tan, K]]
[[Category: Gu, M]]