5jqj - Revision history

OCA at 19:02, 20 September 2023

OCA — Wed, 20 Sep 2023 19:02:25 GMT

←Older revision		Revision as of 19:02, 20 September 2023
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	==Directed evolutionary changes in MBL super family - NDM-1 Round 10 crystal-1==		==Directed evolutionary changes in MBL super family - NDM-1 Round 10 crystal-1==
-	<StructureSection load='5jqj' size='340' side='right' caption='[[5jqj]], [[Resolution\|resolution]] 1.67Å' scene=''>	+	<StructureSection load='5jqj' size='340' side='right'caption='[[5jqj]], [[Resolution\|resolution]] 1.67Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5jqj]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~"bacillus_pneumoniae"_(schroeter_1886)_flugge_1886 "bacillus~~ pneumoniae~~" (schroeter 1886) flugge 1886~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JQJ OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5JQJ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5jqj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Klebsiella_pneumoniae Klebsiella pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JQJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5JQJ FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat">~~<scene name='pdbligand=MES:2~~-~~(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>~~, ~~<scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.67Å</td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat"~~>blaNDM-1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&~~id=~~573~~ "~~Bacillus pneumoniae~~" (~~Schroeter 1886~~) ~~Flugge 1886])</td~~></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	<~~tr id~~='~~activity'><td class~~=~~"sblockLbl"><b>Activity~~:~~</b~~></td><~~td class~~=~~"sblockDat"><span class~~=~~'plainlinks~~'>~~[http://en.wikipedia.org/wiki/Beta-lactamase Beta-lactamase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.2.6 3.5.2.6]~~ </~~span~~></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5jqj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jqj OCA], [https://pdbe.org/5jqj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5jqj RCSB], [https://www.ebi.ac.uk/pdbsum/5jqj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5jqj ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5jqj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jqj OCA], [~~http~~://pdbe.org/5jqj PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5jqj RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5jqj PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5jqj ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/BLAN1_KLEPN BLAN1_KLEPN]] Confers resistance to many beta-lactam antibiotics, including some carbapenems. Does not confer resistance to the polymixin colistin or the fluoroquinolone ciprofloxacin.	+	[https://www.uniprot.org/uniprot/BLAN1_KLEPN BLAN1_KLEPN] Confers resistance to many beta-lactam antibiotics, including some carbapenems. Does not confer resistance to the polymixin colistin or the fluoroquinolone ciprofloxacin.
		+
		+	==See Also==
		+	*[[Beta-lactamase 3D structures\|Beta-lactamase 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Beta-lactamase~~]]	+	[[Category: Klebsiella pneumoniae]]
-	[[Category: ~~Carr, P D~~]]	+	[[Category: Large Structures]]
-	[[Category: ~~Hong, N S~~]]	+	[[Category: Carr PD]]
-	[[Category: ~~Jackson, C J]]~~	+	[[Category: Hong N-S]]
-	~~[[Category: Directed evolution]]~~	+	[[Category: Jackson CJ]]
-	~~[[Category: Hydrolase]]~~	+
-	~~[[Category: Mbl super family]]~~	+
-	~~[[Category: Ndm~~-1]]	+
-	[[Category: ~~Phosphatase~~]]	+

OCA at 12:56, 6 November 2017

OCA — Mon, 06 Nov 2017 12:56:16 GMT

←Older revision		Revision as of 12:56, 6 November 2017
Line 3:		Line 3:
	<StructureSection load='5jqj' size='340' side='right' caption='[[5jqj]], [[Resolution\|resolution]] 1.67Å' scene=''>		<StructureSection load='5jqj' size='340' side='right' caption='[[5jqj]], [[Resolution\|resolution]] 1.67Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5jqj]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JQJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5JQJ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5jqj]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_pneumoniae"_(schroeter_1886)_flugge_1886 "bacillus pneumoniae" (schroeter 1886) flugge 1886]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JQJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5JQJ FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">blaNDM-1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=573 "Bacillus pneumoniae" (Schroeter 1886) Flugge 1886])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-lactamase Beta-lactamase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.2.6 3.5.2.6] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-lactamase Beta-lactamase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.2.6 3.5.2.6] </span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5jqj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jqj OCA], [http://pdbe.org/5jqj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5jqj RCSB], [http://www.ebi.ac.uk/pdbsum/5jqj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5jqj ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5jqj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jqj OCA], [http://pdbe.org/5jqj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5jqj RCSB], [http://www.ebi.ac.uk/pdbsum/5jqj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5jqj ProSAT]</span></td></tr>

OCA at 12:56, 10 May 2017

OCA — Wed, 10 May 2017 12:56:56 GMT

←Older revision		Revision as of 12:56, 10 May 2017
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry~~ 5jqj is ~~ON HOLD until Paper Publication~~	+	==Directed evolutionary changes in MBL super family - NDM-1 Round 10 crystal-1==
-		+	<StructureSection load='5jqj' size='340' side='right' caption='[[5jqj]], [[Resolution\|resolution]] 1.67Å' scene=''>
-	~~Authors~~:	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[5jqj]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JQJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5JQJ FirstGlance]. <br>
-	~~Description~~:	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-lactamase Beta-lactamase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.2.6 3.5.2.6] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5jqj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jqj OCA], [http://pdbe.org/5jqj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5jqj RCSB], [http://www.ebi.ac.uk/pdbsum/5jqj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5jqj ProSAT]</span></td></tr>
		+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/BLAN1_KLEPN BLAN1_KLEPN]] Confers resistance to many beta-lactam antibiotics, including some carbapenems. Does not confer resistance to the polymixin colistin or the fluoroquinolone ciprofloxacin.
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Beta-lactamase]]
		+	[[Category: Carr, P D]]
		+	[[Category: Hong, N S]]
		+	[[Category: Jackson, C J]]
		+	[[Category: Directed evolution]]
		+	[[Category: Hydrolase]]
		+	[[Category: Mbl super family]]
		+	[[Category: Ndm-1]]
		+	[[Category: Phosphatase]]

OCA at 13:42, 1 June 2016

OCA — Wed, 01 Jun 2016 13:42:07 GMT

←Older revision		Revision as of 13:42, 1 June 2016
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 5jqj is ON HOLD	+	The entry 5jqj is ON HOLD until Paper Publication

	Authors:		Authors:

OCA: Protected "5jqj" [edit=sysop:move=sysop]

OCA — Sun, 15 May 2016 15:46:05 GMT

Protected "5jqj" [edit=sysop:move=sysop]

←Older revision

Revision as of 15:46, 15 May 2016

OCA: New page: '''Unreleased structure''' The entry 5jqj is ON HOLD Authors: Description: Category: Unreleased Structures

OCA — Sun, 15 May 2016 15:46:03 GMT

New page: '''Unreleased structure''' The entry 5jqj is ON HOLD Authors: Description: Category: Unreleased Structures

New page

'''Unreleased structure'''

The entry 5jqj is ON HOLD

Authors:

Description:
[[Category: Unreleased Structures]]