5l4v - Revision history

OCA at 16:07, 4 October 2023

OCA — Wed, 04 Oct 2023 16:07:04 GMT

←Older revision		Revision as of 16:07, 4 October 2023
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	==Crystal structure of FimH lectin domain in complex with 3-Deoxy-Heptylmannoside==		==Crystal structure of FimH lectin domain in complex with 3-Deoxy-Heptylmannoside==
-	<StructureSection load='5l4v' size='340' side='right' caption='[[5l4v]], [[Resolution\|resolution]] 2.99Å' scene=''>	+	<StructureSection load='5l4v' size='340' side='right'caption='[[5l4v]], [[Resolution\|resolution]] 2.99Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5l4v]] is a 3 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Ecoli Ecoli~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5L4V OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5L4V FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5l4v]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5L4V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5L4V FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat">~~<scene name='pdbligand=6KW:3~~-~~Deoxy-Heptylmannoside'>6KW</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.99Å</td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat">~~fimH, b4320, JW4283 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode~~=~~Info&srchmode~~=~~5&id=83333 ECOLI])~~</td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6KW:heptyl+3-deoxy-alpha-D-mannopyranoside'>6KW</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5l4v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5l4v OCA], [~~http~~://pdbe.org/5l4v PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5l4v RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5l4v PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5l4v ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5l4v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5l4v OCA], [https://pdbe.org/5l4v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5l4v RCSB], [https://www.ebi.ac.uk/pdbsum/5l4v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5l4v ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/FIMH_ECOLI FIMH_ECOLI]] Involved in regulation of length and mediation of adhesion of type 1 fimbriae (but not necessary for the production of fimbriae). Adhesin responsible for the binding to D-mannose. It is laterally positioned at intervals in the structure of the type 1 fimbriae. In order to integrate FimH in the fimbriae FimF and FimG are needed.	+	[https://www.uniprot.org/uniprot/FIMH_ECOLI FIMH_ECOLI] Involved in regulation of length and mediation of adhesion of type 1 fimbriae (but not necessary for the production of fimbriae). Adhesin responsible for the binding to D-mannose. It is laterally positioned at intervals in the structure of the type 1 fimbriae. In order to integrate FimH in the fimbriae FimF and FimG are needed.
		+
		+	==See Also==
		+	*[[Adhesin 3D structures\|Adhesin 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Ecoli~~]]	+	[[Category: Escherichia coli K-12]]
-	[[Category: Ernst, T]]	+	[[Category: Large Structures]]
-	[[Category: Jakob~~, R P~~]]	+	[[Category: Ernst T]]
-	[[Category: Maier, T]]	+	[[Category: Jakob RP]]
-	[[Category: Rabbani, S]]	+	[[Category: Maier T]]
-	[[Category: Zihlmann, P]]	+	[[Category: Rabbani S]]
-	~~[[Category: Carbohydrate]]~~	+	[[Category: Zihlmann P]]
-	~~[[Category: Cell adhesion]]~~	+
-	~~[[Category: Fimh]]~~	+
-	~~[[Category: Lectin]]~~	+
-	~~[[Category: Mannose]]~~	+
-	~~[[Category: Sugar binding protein]]~~	+
-	~~[[Category: Type 1 pilus]]~~	+
-	~~[[Category: Urinary tract infection]]~~	+
-	~~[[Category: Uti~~]]	+

OCA at 08:38, 16 November 2017

OCA — Thu, 16 Nov 2017 08:38:40 GMT

←Older revision		Revision as of 08:38, 16 November 2017
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-	'''Unreleased structure'''

-	~~The entry~~ 5l4v is ~~ON HOLD until Paper Publication~~	+	==Crystal structure of FimH lectin domain in complex with 3-Deoxy-Heptylmannoside==
-		+	<StructureSection load='5l4v' size='340' side='right' caption='[[5l4v]], [[Resolution\|resolution]] 2.99Å' scene=''>
-	~~Authors~~:	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[5l4v]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoli Ecoli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5L4V OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5L4V FirstGlance]. <br>
-	~~Description~~:	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=6KW:3-Deoxy-Heptylmannoside'>6KW</scene></td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">fimH, b4320, JW4283 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5l4v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5l4v OCA], [http://pdbe.org/5l4v PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5l4v RCSB], [http://www.ebi.ac.uk/pdbsum/5l4v PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5l4v ProSAT]</span></td></tr>
		+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/FIMH_ECOLI FIMH_ECOLI]] Involved in regulation of length and mediation of adhesion of type 1 fimbriae (but not necessary for the production of fimbriae). Adhesin responsible for the binding to D-mannose. It is laterally positioned at intervals in the structure of the type 1 fimbriae. In order to integrate FimH in the fimbriae FimF and FimG are needed.
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Ecoli]]
		+	[[Category: Ernst, T]]
		+	[[Category: Jakob, R P]]
		+	[[Category: Maier, T]]
		+	[[Category: Rabbani, S]]
		+	[[Category: Zihlmann, P]]
		+	[[Category: Carbohydrate]]
		+	[[Category: Cell adhesion]]
		+	[[Category: Fimh]]
		+	[[Category: Lectin]]
		+	[[Category: Mannose]]
		+	[[Category: Sugar binding protein]]
		+	[[Category: Type 1 pilus]]
		+	[[Category: Urinary tract infection]]
		+	[[Category: Uti]]

OCA at 13:53, 20 June 2016

OCA — Mon, 20 Jun 2016 13:53:23 GMT

←Older revision		Revision as of 13:53, 20 June 2016
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 5l4v is ON HOLD	+	The entry 5l4v is ON HOLD until Paper Publication

	Authors:		Authors:

OCA: Protected "5l4v" [edit=sysop:move=sysop]

OCA — Wed, 01 Jun 2016 14:30:43 GMT

Protected "5l4v" [edit=sysop:move=sysop]

←Older revision

Revision as of 14:30, 1 June 2016

OCA: New page: '''Unreleased structure''' The entry 5l4v is ON HOLD Authors: Description: Category: Unreleased Structures

OCA — Wed, 01 Jun 2016 14:30:42 GMT

New page: '''Unreleased structure''' The entry 5l4v is ON HOLD Authors: Description: Category: Unreleased Structures

New page

'''Unreleased structure'''

The entry 5l4v is ON HOLD

Authors:

Description:
[[Category: Unreleased Structures]]