5nch - Revision history

OCA at 12:46, 15 November 2023

OCA — Wed, 15 Nov 2023 12:46:21 GMT

←Older revision		Revision as of 12:46, 15 November 2023
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	<StructureSection load='5nch' size='340' side='right'caption='[[5nch]], [[Resolution\|resolution]] 1.82Å' scene=''>		<StructureSection load='5nch' size='340' side='right'caption='[[5nch]], [[Resolution\|resolution]] 1.82Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5nch]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NCH OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=5NCH FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5nch]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_muensis Streptomyces muensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NCH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5NCH FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=5nch FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5nch OCA], [~~http~~://pdbe.org/5nch PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5nch RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5nch PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5nch ProSAT]</span></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.819Å</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5nch FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5nch OCA], [https://pdbe.org/5nch PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5nch RCSB], [https://www.ebi.ac.uk/pdbsum/5nch PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5nch ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/A0A0E3URV8_STRM4 A0A0E3URV8_STRM4]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
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	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Blankenfeldt, W~~]]	+	[[Category: Streptomyces muensis]]
-	[[Category: ~~Lukat, P~~]]	+	[[Category: Blankenfeldt W]]
-	[[Category: ~~Mueller, R~~]]	+	[[Category: Lukat P]]
-	[[Category: ~~4-methyl-proline]]~~	+	[[Category: Mueller R]]
-	~~[[Category: 5-hydroxyleucine]]~~	+
-	~~[[Category: Griselimycin]]~~	+
-	~~[[Category: Hydroxylase]]~~	+
-	~~[[Category: Leucine hydroxylase]]~~	+
-	~~[[Category: Methyl-griselimycin]]~~	+
-	~~[[Category: Non-heme iron protein]]~~	+
-	~~[[Category: Oxidoreductase~~]]	+

OCA at 12:02, 26 August 2020

OCA — Wed, 26 Aug 2020 12:02:15 GMT

←Older revision		Revision as of 12:02, 26 August 2020
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	==GriE apo form==		==GriE apo form==
-	<StructureSection load='5nch' size='340' side='right' caption='[[5nch]], [[Resolution\|resolution]] 1.82Å' scene=''>	+	<StructureSection load='5nch' size='340' side='right'caption='[[5nch]], [[Resolution\|resolution]] 1.82Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5nch]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NCH OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5NCH FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5nch]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NCH OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5NCH FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5nch FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5nch OCA], [http://pdbe.org/5nch PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5nch RCSB], [http://www.ebi.ac.uk/pdbsum/5nch PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5nch ProSAT]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5nch FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5nch OCA], [http://pdbe.org/5nch PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5nch RCSB], [http://www.ebi.ac.uk/pdbsum/5nch PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5nch ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
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	</div>		</div>
	<div class="pdbe-citations 5nch" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 5nch" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Hydroxylases 3D structures\|Hydroxylases 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Blankenfeldt, W]]		[[Category: Blankenfeldt, W]]
	[[Category: Lukat, P]]		[[Category: Lukat, P]]

OCA at 07:41, 6 December 2017

OCA — Wed, 06 Dec 2017 07:41:55 GMT

←Older revision		Revision as of 07:41, 6 December 2017
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-	'''Unreleased structure'''

-	~~The entry~~ 5nch is ~~ON HOLD until Paper~~ Publication	+	==GriE apo form==
		+	<StructureSection load='5nch' size='340' side='right' caption='[[5nch]], [[Resolution\|resolution]] 1.82Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[5nch]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NCH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5NCH FirstGlance]. <br>
		+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5nch FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5nch OCA], [http://pdbe.org/5nch PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5nch RCSB], [http://www.ebi.ac.uk/pdbsum/5nch PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5nch ProSAT]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Griselimycins (GMs) are depsidecapeptides with superb anti-tuberculosis activity. They contain up to three (2S,4R)-4-methyl-prolines (4-MePro), of which one blocks oxidative degradation and increases metabolic stability in animal models. The natural congener with this substitution is only a minor component in fermentation cultures. We showed that this product can be significantly increased by feeding the reaction with 4-MePro and we investigated the molecular basis of 4-MePro biosynthesis and incorporation. We identified the GM biosynthetic gene cluster as encoding a nonribosomal peptide synthetase and a sub-operon for 4-MePro formation. Using heterologous expression, gene inactivation, and in vitro experiments, we showed that 4-MePro is generated by leucine hydroxylation, oxidation to an aldehyde, and ring closure with subsequent reduction. The crystal structures of the leucine hydroxylase GriE have been determined in complex with substrates and products, providing insight into the stereospecificity of the reaction.

-	~~Authors~~:	+	Biosynthesis of methyl-proline containing griselimycins, natural products with anti-tuberculosis activity.,Lukat P, Katsuyama Y, Wenzel S, Binz T, Konig C, Blankenfeldt W, Bronstrup M, Muller R Chem Sci. 2017 Nov 1;8(11):7521-7527. doi: 10.1039/c7sc02622f. Epub 2017 Aug 3. PMID:29163906<ref>PMID:29163906</ref>

-	~~Description~~:	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	[[Category: ~~Unreleased Structures~~]]	+	</div>
		+	<div class="pdbe-citations 5nch" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Blankenfeldt, W]]
		+	[[Category: Lukat, P]]
		+	[[Category: Mueller, R]]
		+	[[Category: 4-methyl-proline]]
		+	[[Category: 5-hydroxyleucine]]
		+	[[Category: Griselimycin]]
		+	[[Category: Hydroxylase]]
		+	[[Category: Leucine hydroxylase]]
		+	[[Category: Methyl-griselimycin]]
		+	[[Category: Non-heme iron protein]]
		+	[[Category: Oxidoreductase]]

OCA: Protected "5nch" [edit=sysop:move=sysop]

OCA — Wed, 15 Mar 2017 17:23:45 GMT

Protected "5nch" [edit=sysop:move=sysop]

←Older revision

Revision as of 17:23, 15 March 2017

OCA: New page: '''Unreleased structure''' The entry 5nch is ON HOLD until Paper Publication Authors: Description: Category: Unreleased Structures

OCA — Wed, 15 Mar 2017 17:23:43 GMT

New page: '''Unreleased structure''' The entry 5nch is ON HOLD until Paper Publication Authors: Description: Category: Unreleased Structures

New page

'''Unreleased structure'''

The entry 5nch is ON HOLD until Paper Publication

Authors:

Description:
[[Category: Unreleased Structures]]