5o2p - Revision history

OCA at 10:22, 14 June 2023

OCA — Wed, 14 Jun 2023 10:22:31 GMT

←Older revision		Revision as of 10:22, 14 June 2023
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	==p130Cas SH3 domain PTP-PEST peptide chimera==		==p130Cas SH3 domain PTP-PEST peptide chimera==
-	<StructureSection load='5o2p' size='340' side='right'caption='[[5o2p~~]], [[NMR_Ensembles_of_Models \| 40 NMR models~~]]' scene=''>	+	<StructureSection load='5o2p' size='340' side='right'caption='[[5o2p]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5o2p]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Human Human~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5O2P OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5O2P FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5o2p]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5O2P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5O2P FirstGlance]. <br>
-	</td></tr>~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PTPN12 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>~~	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5o2p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5o2p OCA], [https://pdbe.org/5o2p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5o2p RCSB], [https://www.ebi.ac.uk/pdbsum/5o2p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5o2p ProSAT]</span></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Protein-tyrosine-phosphatase Protein-tyrosine-phosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.3.48 3.1.3.48] </span></td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5o2p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5o2p OCA], [~~http~~://pdbe.org/5o2p PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5o2p RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5o2p PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5o2p ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/BCAR1_HUMAN BCAR1_HUMAN] Docking protein which plays a central coordinating role for tyrosine kinase-based signaling related to cell adhesion. Implicated in induction of cell migration. Overexpression confers antiestrogen resistance on breast cancer cells.<ref>PMID:12832404</ref> <ref>PMID:17038317</ref> [https://www.uniprot.org/uniprot/PTN12_HUMAN PTN12_HUMAN] Dephosphorylates cellular tyrosine kinases, including PTK2B/PYK2, and thereby regulates signaling via PTK2B/PYK2.<ref>PMID:17329398</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 19:		Line 19:

	==See Also==		==See Also==
-	*[[Tyrosine phosphatase\|Tyrosine phosphatase]]	+	*[[Tyrosine phosphatase 3D structures\|Tyrosine phosphatase 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Human~~]]	+	[[Category: Homo sapiens]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	~~[[Category: Protein-tyrosine-phosphatase]]~~	+	[[Category: Hexnerova R]]
-	[[Category: Hexnerova, R]]	+	[[Category: Veverka V]]
-	[[Category: Veverka, V]]	+
-	~~[[Category: P130ca]]~~	+
-	~~[[Category: Sh3 domain]]~~	+
-	~~[[Category: Structure from cyana 3 97~~]]	+

OCA at 13:16, 10 May 2019

OCA — Fri, 10 May 2019 13:16:06 GMT

←Older revision		Revision as of 13:16, 10 May 2019
Line 1:		Line 1:

	==p130Cas SH3 domain PTP-PEST peptide chimera==		==p130Cas SH3 domain PTP-PEST peptide chimera==
-	<StructureSection load='5o2p' size='340' side='right' caption='[[5o2p]], [[NMR_Ensembles_of_Models \| 40 NMR models]]' scene=''>	+	<StructureSection load='5o2p' size='340' side='right'caption='[[5o2p]], [[NMR_Ensembles_of_Models \| 40 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5o2p]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5O2P OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5O2P FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5o2p]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5O2P OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5O2P FirstGlance]. <br>
-	</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Protein-tyrosine-phosphatase Protein-tyrosine-phosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.3.48 3.1.3.48] </span></td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PTPN12 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Protein-tyrosine-phosphatase Protein-tyrosine-phosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.3.48 3.1.3.48] </span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5o2p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5o2p OCA], [http://pdbe.org/5o2p PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5o2p RCSB], [http://www.ebi.ac.uk/pdbsum/5o2p PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5o2p ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5o2p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5o2p OCA], [http://pdbe.org/5o2p PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5o2p RCSB], [http://www.ebi.ac.uk/pdbsum/5o2p PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5o2p ProSAT]</span></td></tr>
	</table>		</table>
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	</div>		</div>
	<div class="pdbe-citations 5o2p" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 5o2p" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Tyrosine phosphatase\|Tyrosine phosphatase]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Human]]
		+	[[Category: Large Structures]]
	[[Category: Protein-tyrosine-phosphatase]]		[[Category: Protein-tyrosine-phosphatase]]
	[[Category: Hexnerova, R]]		[[Category: Hexnerova, R]]

OCA: Protected "5o2p" [edit=sysop:move=sysop]

OCA — Thu, 21 Sep 2017 04:35:39 GMT

Protected "5o2p" [edit=sysop:move=sysop]

←Older revision

Revision as of 04:35, 21 September 2017

OCA: New page: ==p130Cas SH3 domain PTP-PEST peptide chimera== == Structur...

OCA — Thu, 21 Sep 2017 04:35:37 GMT

New page: ==p130Cas SH3 domain PTP-PEST peptide chimera== <StructureSection load='5o2p' size='340' side='right' caption='5o2p, 40 NMR models' scene=''> == Structur...

New page

==p130Cas SH3 domain PTP-PEST peptide chimera==
<StructureSection load='5o2p' size='340' side='right' caption='[[5o2p]], [[NMR_Ensembles_of_Models | 40 NMR models]]' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[5o2p]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5O2P OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5O2P FirstGlance]. <br>
</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Protein-tyrosine-phosphatase Protein-tyrosine-phosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.3.48 3.1.3.48] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5o2p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5o2p OCA], [http://pdbe.org/5o2p PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5o2p RCSB], [http://www.ebi.ac.uk/pdbsum/5o2p PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5o2p ProSAT]</span></td></tr>
</table>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
CAS is a docking protein downstream of the proto-oncogene Src with a role in invasion and metastasis of cancer cells. The CAS SH3 domain is indispensable for CAS-mediated signaling, but structural aspects of CAS SH3 ligand binding and regulation are not well understood. Here, we identified the consensus CAS SH3 binding motif and structurally characterized the CAS SH3 domain in complex with ligand. We revealed the requirement for an uncommon centrally localized lysine residue at position +2 of CAS SH3 ligands and two rather dissimilar optional anchoring residues, leucine and arginine, at position +5. We further expanded the knowledge of CAS SH3 ligand binding regulation by manipulating tyrosine 12 phosphorylation and confirmed the negative role of this phosphorylation on CAS SH3 ligand binding. Finally, by exploiting the newly identified binding requirements of the CAS SH3 domain, we predicted and experimentally verified two novel CAS SH3 binding partners, DOK7 and GLIS2.

Structural characterization of CAS SH3 domain selectivity and regulation reveals new CAS interaction partners.,Gemperle J, Hexnerova R, Lepsik M, Tesina P, Dibus M, Novotny M, Brabek J, Veverka V, Rosel D Sci Rep. 2017 Aug 14;7(1):8057. doi: 10.1038/s41598-017-08303-4. PMID:28808245<ref>PMID:28808245</ref>

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
</div>
<div class="pdbe-citations 5o2p" style="background-color:#fffaf0;"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Protein-tyrosine-phosphatase]]
[[Category: Hexnerova, R]]
[[Category: Veverka, V]]
[[Category: P130ca]]
[[Category: Sh3 domain]]
[[Category: Structure from cyana 3 97]]