5rav - Revision history

OCA at 13:41, 1 March 2024

OCA — Fri, 01 Mar 2024 13:41:09 GMT

←Older revision		Revision as of 13:41, 1 March 2024
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	==PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with FM001763a==		==PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with FM001763a==
-	<StructureSection load='5rav' size='340' side='right'caption='[[5rav]]' scene=''>	+	<StructureSection load='5rav' size='340' side='right'caption='[[5rav]], [[Resolution\|resolution]] 1.77Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5RAV OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=5RAV FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5rav]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5RAV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5RAV FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=5rav FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5rav OCA], [~~http~~://pdbe.org/5rav PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5rav RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5rav PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5rav ProSAT]</span></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.77Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=S9G:cyclopropyl-[4-[(2~{S})-oxolan-2-yl]carbonylpiperazin-1-yl]methanone'>S9G</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5rav FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5rav OCA], [https://pdbe.org/5rav PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5rav RCSB], [https://www.ebi.ac.uk/pdbsum/5rav PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5rav ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/KDM3B_HUMAN KDM3B_HUMAN] Histone demethylase that specifically demethylates 'Lys-9' of histone H3, thereby playing a central role in histone code. Demethylation of Lys residue generates formaldehyde and succinate. May have tumor suppressor activity.<ref>PMID:16603237</ref>
		+
		+	==See Also==
		+	*[[Jumonji domain-containing protein 3D structures\|Jumonji domain-containing protein 3D structures]]
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Homo sapiens]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Arrowsmith CH]]		[[Category: Arrowsmith CH]]

OCA at 05:38, 22 April 2020

OCA — Wed, 22 Apr 2020 05:38:51 GMT

←Older revision		Revision as of 05:38, 22 April 2020
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry~~ 5rav ~~is ON HOLD~~	+	==PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with FM001763a==
-		+	<StructureSection load='5rav' size='340' side='right'caption='[[5rav]]' scene=''>
-	~~Authors~~: ~~Snee, M~~.~~, Nowak, R~~.~~, Johansson, C~~.~~, Burgess~~-~~Brown, N~~.A., ~~Arrowsmith, C~~.H., ~~Bountra~~, C., ~~Edwards, A~~.M., ~~Oppermann, U~~.	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5RAV OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5RAV FirstGlance]. <br>
-	~~Description: PanDDA analysis group deposition --Crystal Structure of JMJD1B in complex with FM001763a~~	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5rav FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5rav OCA], [http://pdbe.org/5rav PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5rav RCSB], [http://www.ebi.ac.uk/pdbsum/5rav PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5rav ProSAT]</span></td></tr>
-	[[Category: ~~Unreleased~~ Structures]]	+	</table>
-	[[Category: ~~Nowak, R~~]]	+	__TOC__
-	[[Category: ~~Edwards, A.M~~]]	+	</StructureSection>
-	[[Category: ~~Arrowsmith, C.H~~]]	+	[[Category: Large Structures]]
-	[[Category: ~~Johansson, C~~]]	+	[[Category: Arrowsmith CH]]
-	[[Category: ~~Oppermann, U~~]]	+	[[Category: Bountra C]]
-	[[Category: ~~Burgess-Brown, N.A~~]]	+	[[Category: Burgess-Brown NA]]
-	[[Category: ~~Snee, M~~]]	+	[[Category: Edwards AM]]
-	[[Category: ~~Bountra, C~~]]	+	[[Category: Johansson C]]
		+	[[Category: Nowak R]]
		+	[[Category: Oppermann U]]
		+	[[Category: Snee M]]

OCA at 08:10, 27 March 2020

OCA — Fri, 27 Mar 2020 08:10:15 GMT

←Older revision		Revision as of 08:10, 27 March 2020
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	The entry 5rav is ON HOLD		The entry 5rav is ON HOLD

-	Authors: Snee, M., Nowak, R., Johansson, C., Burgess-Brown, N.A., Arrowsmith, C.H, Bountra, C., Edwards, A.M, Oppermann, U.	+	Authors: Snee, M., Nowak, R., Johansson, C., Burgess-Brown, N.A., Arrowsmith, C.H., Bountra, C., Edwards, A.M., Oppermann, U.

	Description: PanDDA analysis group deposition --Crystal Structure of JMJD1B in complex with FM001763a		Description: PanDDA analysis group deposition --Crystal Structure of JMJD1B in complex with FM001763a
	[[Category: Unreleased Structures]]		[[Category: Unreleased Structures]]
	[[Category: Nowak, R]]		[[Category: Nowak, R]]
-	~~[[Category: Burgess-Brown, N.A]]~~	+	[[Category: Edwards, A.M]]
-	[[Category: Edwards, A.M~~, Oppermann, U~~]]	+	[[Category: Arrowsmith, C.H]]
-	[[Category: Arrowsmith, C.H~~, Bountra, C~~]]	+
	[[Category: Johansson, C]]		[[Category: Johansson, C]]
		+	[[Category: Oppermann, U]]
		+	[[Category: Burgess-Brown, N.A]]
	[[Category: Snee, M]]		[[Category: Snee, M]]
		+	[[Category: Bountra, C]]

OCA: Protected "5rav" [edit=sysop:move=sysop]

OCA — Wed, 11 Mar 2020 05:53:40 GMT

Protected "5rav" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:53, 11 March 2020

OCA: New page: '''Unreleased structure''' The entry 5rav is ON HOLD Authors: Snee, M., Nowak, R., Johansson, C., Burgess-Brown, N.A., Arrowsmith, C.H, Bountra, C., Edwards, A.M, Oppermann, U. Descrip...

OCA — Wed, 11 Mar 2020 05:53:39 GMT

New page: '''Unreleased structure''' The entry 5rav is ON HOLD Authors: Snee, M., Nowak, R., Johansson, C., Burgess-Brown, N.A., Arrowsmith, C.H, Bountra, C., Edwards, A.M, Oppermann, U. Descrip...

New page

'''Unreleased structure'''

The entry 5rav is ON HOLD

Authors: Snee, M., Nowak, R., Johansson, C., Burgess-Brown, N.A., Arrowsmith, C.H, Bountra, C., Edwards, A.M, Oppermann, U.

Description: PanDDA analysis group deposition --Crystal Structure of JMJD1B in complex with FM001763a
[[Category: Unreleased Structures]]
[[Category: Nowak, R]]
[[Category: Burgess-Brown, N.A]]
[[Category: Edwards, A.M, Oppermann, U]]
[[Category: Arrowsmith, C.H, Bountra, C]]
[[Category: Johansson, C]]
[[Category: Snee, M]]