5t06 - Revision history

OCA at 12:52, 4 October 2023

OCA — Wed, 04 Oct 2023 12:52:24 GMT

←Older revision		Revision as of 12:52, 4 October 2023
Line 3:		Line 3:
	<StructureSection load='5t06' size='340' side='right'caption='[[5t06]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='5t06' size='340' side='right'caption='[[5t06]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5t06]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Eco57 Eco57~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5T06 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=5T06 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5t06]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_O157:H7 Escherichia coli O157:H7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5T06 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5T06 FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=EDO:1,2~~-~~ETHANEDIOL'>EDO</scene>~~, ~~<scene name='pdbligand=HXC:HEXANOYL-COENZYME+A'>HXC</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.898Å</td></tr>
-	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat">~~[[1s5u\|1s5u]]~~, ~~[[5kl9\|5kl9]], [[5t07\|5t07]]</td~~></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HXC:HEXANOYL-COENZYME+A'>HXC</scene></td></tr>
-	<~~tr id~~='~~gene'><td class~~=~~"sblockLbl"><b>[[Gene\|Gene~~:~~]]</b~~></td>~~<td class="sblockDat">ybgC, Z0904, ECs0771 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83334 ECO57])~~</td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5t06 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5t06 OCA], [https://pdbe.org/5t06 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5t06 RCSB], [https://www.ebi.ac.uk/pdbsum/5t06 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5t06 ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=5t06 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5t06 OCA], [~~http~~://pdbe.org/5t06 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5t06 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5t06 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5t06 ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/~~YBGC_ECO57 YBGC_ECO57]~~] Thioesterase that appears to be involved in phospholipid metabolism. Some specific acyl-ACPs could be physiological substrates. Displays acyl-CoA thioesterase activity on malonyl-CoA in vitro, catalyzing the hydrolysis of the thioester bond ~~(By similarity)~~.	+	[https://www.uniprot.org/uniprot/YBGC_ECOLI YBGC_ECOLI] Thioesterase that appears to be involved in phospholipid metabolism. Some specific acyl-ACPs could be physiological substrates. Displays acyl-CoA thioesterase activity on malonyl-CoA in vitro, catalyzing the hydrolysis of the thioester bond.

	==See Also==		==See Also==
Line 16:		Line 15:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Eco57~~]]	+	[[Category: Escherichia coli O157:H7]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Anderson~~, W F]]~~	+	[[Category: Anderson WF]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Di Leo R]]
-	[[Category: Leo, R Di]]	+	[[Category: Savchenko A]]
-	[[Category: Savchenko, A]]	+	[[Category: Skarina T]]
-	[[Category: Skarina, T]]	+	[[Category: Stogios PJ]]
-	[[Category: Stogios~~, P J~~]]	+	[[Category: Watanabe N]]
-	[[Category: Watanabe, N]]	+
-	~~[[Category: Acyl-coa]]~~	+
-	~~[[Category: Alpha/beta fold]]~~	+
-	~~[[Category: Csgid]]~~	+
-	~~[[Category: Hotdog fold]]~~	+
-	~~[[Category: Hydrolase]]~~	+
-	~~[[Category: Thioesterae~~]]	+

OCA at 11:15, 16 September 2020

OCA — Wed, 16 Sep 2020 11:15:55 GMT

←Older revision		Revision as of 11:15, 16 September 2020
Line 1:		Line 1:

	==Crystal structure of a putative acyl-CoA thioesterase EC709/ECK0725 from Escherichia coli in complex with Hexanoyl-CoA==		==Crystal structure of a putative acyl-CoA thioesterase EC709/ECK0725 from Escherichia coli in complex with Hexanoyl-CoA==
-	<StructureSection load='5t06' size='340' side='right' caption='[[5t06]], [[Resolution\|resolution]] 1.90Å' scene=''>	+	<StructureSection load='5t06' size='340' side='right'caption='[[5t06]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5t06]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5T06 OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5T06 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5t06]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Eco57 Eco57]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5T06 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5T06 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HXC:HEXANOYL-COENZYME+A'>HXC</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HXC:HEXANOYL-COENZYME+A'>HXC</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1s5u\|1s5u]], [[5kl9\|5kl9]], [[5t07\|5t07]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1s5u\|1s5u]], [[5kl9\|5kl9]], [[5t07\|5t07]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5t06 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5t06 OCA], [http://pdbe.org/5t06 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5t06 RCSB], [http://www.ebi.ac.uk/pdbsum/5t06 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5t06 ProSAT]</span></td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ybgC, Z0904, ECs0771 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83334 ECO57])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5t06 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5t06 OCA], [http://pdbe.org/5t06 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5t06 RCSB], [http://www.ebi.ac.uk/pdbsum/5t06 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5t06 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[http://www.uniprot.org/uniprot/YBGC_ECO57 YBGC_ECO57]] Thioesterase that appears to be involved in phospholipid metabolism. Some specific acyl-ACPs could be physiological substrates. Displays acyl-CoA thioesterase activity on malonyl-CoA in vitro, catalyzing the hydrolysis of the thioester bond (By similarity).		[[http://www.uniprot.org/uniprot/YBGC_ECO57 YBGC_ECO57]] Thioesterase that appears to be involved in phospholipid metabolism. Some specific acyl-ACPs could be physiological substrates. Displays acyl-CoA thioesterase activity on malonyl-CoA in vitro, catalyzing the hydrolysis of the thioester bond (By similarity).
		+
		+	==See Also==
		+	*[[Thioesterase 3D structures\|Thioesterase 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Eco57]]
		+	[[Category: Large Structures]]
	[[Category: Anderson, W F]]		[[Category: Anderson, W F]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]

OCA at 09:42, 2 January 2017

OCA — Mon, 02 Jan 2017 09:42:36 GMT

←Older revision		Revision as of 09:42, 2 January 2017
Line 21:		Line 21:
	[[Category: Acyl-coa]]		[[Category: Acyl-coa]]
	[[Category: Alpha/beta fold]]		[[Category: Alpha/beta fold]]
		+	[[Category: Csgid]]
	[[Category: Hotdog fold]]		[[Category: Hotdog fold]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]
	[[Category: Thioesterae]]		[[Category: Thioesterae]]

OCA: Protected "5t06" [edit=sysop:move=sysop]

OCA — Sat, 10 Sep 2016 21:17:07 GMT

Protected "5t06" [edit=sysop:move=sysop]

←Older revision

Revision as of 21:17, 10 September 2016

OCA: New page: ==Crystal structure of a putative acyl-CoA thioesterase EC709/ECK0725 from Escherichia coli in complex with Hexanoyl-CoA== == Structural highlights ==
<table><tr><td colspan='2'>[[5t06]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5T06 OCA]. For a guided tour on the structure components use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5T06 FirstGlance]. 
</td></tr><tr id='ligand'><td class="sblockLbl">[[Ligand|Ligands:]]</td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HXC:HEXANOYL-COENZYME+A'>HXC</scene></td></tr>
<tr id='related'><td class="sblockLbl">[[Related_structure|Related:]]</td><td class="sblockDat">[[1s5u|1s5u]], [[5kl9|5kl9]], [[5t07|5t07]]</td></tr>
<tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5t06 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5t06 OCA], [http://pdbe.org/5t06 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5t06 RCSB], [http://www.ebi.ac.uk/pdbsum/5t06 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5t06 ProSAT]</td></tr>
</table>
== Function ==
[[http://www.uniprot.org/uniprot/YBGC_ECO57 YBGC_ECO57]] Thioesterase that appears to be involved in phospholipid metabolism. Some specific acyl-ACPs could be physiological substrates. Displays acyl-CoA thioesterase activity on malonyl-CoA in vitro, catalyzing the hydrolysis of the thioester bond (By similarity).
TOC
</StructureSection>
[[Category: Anderson, W F]]
[[Category: Structural genomic]]
[[Category: Leo, R Di]]
[[Category: Savchenko, A]]
[[Category: Skarina, T]]
[[Category: Stogios, P J]]
[[Category: Watanabe, N]]
[[Category: Acyl-coa]]
[[Category: Alpha/beta fold]]
[[Category: Hotdog fold]]
[[Category: Hydrolase]]
[[Category: Thioesterae]]