5tgf - Revision history

OCA at 15:40, 6 March 2024

OCA — Wed, 06 Mar 2024 15:40:51 GMT

←Older revision		Revision as of 15:40, 6 March 2024
Line 3:		Line 3:
	<StructureSection load='5tgf' size='340' side='right'caption='[[5tgf]], [[Resolution\|resolution]] 1.81Å' scene=''>		<StructureSection load='5tgf' size='340' side='right'caption='[[5tgf]], [[Resolution\|resolution]] 1.81Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5tgf]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Bacteroides_dorei_175 Bacteroides~~ dorei ~~175~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5TGF OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=5TGF FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5tgf]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Phocaeicola_dorei_DSM_17855 Phocaeicola dorei DSM 17855]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5TGF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5TGF FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>~~, ~~<scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.81Å</td></tr>
-	<tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"><scene name='pdbligand=~~MSE~~:~~SELENOMETHIONINE~~'>~~MSE~~</scene><~~/td~~></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<~~tr id~~='~~gene'><td class~~=~~"sblockLbl"><b>[[Gene\|Gene~~:~~]]</b~~></td>~~<td class="sblockDat">BACDOR_00452 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=483217 Bacteroides dorei 175])~~</td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5tgf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5tgf OCA], [https://pdbe.org/5tgf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5tgf RCSB], [https://www.ebi.ac.uk/pdbsum/5tgf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5tgf ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=5tgf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5tgf OCA], [~~http~~://pdbe.org/5tgf PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5tgf RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5tgf PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5tgf ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/B6VTD5_9BACT B6VTD5_9BACT]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Bacteroides dorei 175]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Babnigg, G]]	+	[[Category: Phocaeicola dorei DSM 17855]]
-	[[Category: Hatzos-Skintges, C]]	+	[[Category: Babnigg G]]
-	[[Category: Joachimiak, A]]	+	[[Category: Hatzos-Skintges C]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Joachimiak A]]
-	[[Category: Nocek, B]]	+	[[Category: Nocek B]]
-	~~[[Category: Beta-lactamase]]~~	+
-	~~[[Category: Hydrolase]]~~	+
-	~~[[Category: Mcsg]]~~	+
-	~~[[Category: Psi-biology~~]]	+

OCA at 12:09, 23 September 2020

OCA — Wed, 23 Sep 2020 12:09:55 GMT

←Older revision		Revision as of 12:09, 23 September 2020
Line 1:		Line 1:

	==Crystal structure of putative beta-lactamase from Bacteroides dorei DSM 17855==		==Crystal structure of putative beta-lactamase from Bacteroides dorei DSM 17855==
-	<StructureSection load='5tgf' size='340' side='right' caption='[[5tgf]], [[Resolution\|resolution]] 1.81Å' scene=''>	+	<StructureSection load='5tgf' size='340' side='right'caption='[[5tgf]], [[Resolution\|resolution]] 1.81Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5tgf]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5TGF OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5TGF FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5tgf]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_dorei_175 Bacteroides dorei 175]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5TGF OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5TGF FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5tgf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5tgf OCA], [http://pdbe.org/5tgf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5tgf RCSB], [http://www.ebi.ac.uk/pdbsum/5tgf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5tgf ProSAT]</span></td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BACDOR_00452 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=483217 Bacteroides dorei 175])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5tgf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5tgf OCA], [http://pdbe.org/5tgf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5tgf RCSB], [http://www.ebi.ac.uk/pdbsum/5tgf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5tgf ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Bacteroides dorei 175]]
		+	[[Category: Large Structures]]
	[[Category: Babnigg, G]]		[[Category: Babnigg, G]]
	[[Category: Hatzos-Skintges, C]]		[[Category: Hatzos-Skintges, C]]

OCA at 18:51, 26 October 2016

OCA — Wed, 26 Oct 2016 18:51:28 GMT

←Older revision		Revision as of 18:51, 26 October 2016
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry~~ 5tgf ~~is ON HOLD~~	+	==Crystal structure of putative beta-lactamase from Bacteroides dorei DSM 17855==
-		+	<StructureSection load='5tgf' size='340' side='right' caption='[[5tgf]], [[Resolution\|resolution]] 1.81Å' scene=''>
-	~~Authors~~: ~~Nocek~~, B., ~~Hatzos~~-~~Skintges~~, C., ~~Babnigg, G~~., ~~Joachimiak, A~~., ~~Midwest Center for Structural Genomics (MCSG)~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[5tgf]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5TGF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5TGF FirstGlance]. <br>
-	~~Description~~: ~~Crystal structure of putative beta-lactamase from Bacteroides dorei DSM 17855~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5tgf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5tgf OCA], [http://pdbe.org/5tgf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5tgf RCSB], [http://www.ebi.ac.uk/pdbsum/5tgf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5tgf ProSAT]</span></td></tr>
		+	</table>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Babnigg, G]]
		+	[[Category: Hatzos-Skintges, C]]
	[[Category: Joachimiak, A]]		[[Category: Joachimiak, A]]
		+	[[Category: Structural genomic]]
	[[Category: Nocek, B]]		[[Category: Nocek, B]]
-	[[Category: ~~Babnigg, G~~]]	+	[[Category: Beta-lactamase]]
-	[[Category: ~~Hatzos-Skintges, C~~]]	+	[[Category: Hydrolase]]
-	[[Category: ~~Midwest Center For Structural Genomics (~~Mcsg)]]	+	[[Category: Mcsg]]
		+	[[Category: Psi-biology]]

OCA: Protected "5tgf" [edit=sysop:move=sysop]

OCA — Wed, 05 Oct 2016 20:03:23 GMT

Protected "5tgf" [edit=sysop:move=sysop]

←Older revision

Revision as of 20:03, 5 October 2016

OCA: New page: '''Unreleased structure''' The entry 5tgf is ON HOLD Authors: Nocek, B., Hatzos-Skintges, C., Babnigg, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG) Description: Cr...

OCA — Wed, 05 Oct 2016 20:03:22 GMT

New page: '''Unreleased structure''' The entry 5tgf is ON HOLD Authors: Nocek, B., Hatzos-Skintges, C., Babnigg, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG) Description: Cr...

New page

'''Unreleased structure'''

The entry 5tgf is ON HOLD

Authors: Nocek, B., Hatzos-Skintges, C., Babnigg, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Description: Crystal structure of putative beta-lactamase from Bacteroides dorei DSM 17855
[[Category: Unreleased Structures]]
[[Category: Joachimiak, A]]
[[Category: Nocek, B]]
[[Category: Babnigg, G]]
[[Category: Hatzos-Skintges, C]]
[[Category: Midwest Center For Structural Genomics (Mcsg)]]