5tvg - Revision history

OCA at 13:13, 4 October 2023

OCA — Wed, 04 Oct 2023 13:13:18 GMT

←Older revision		Revision as of 13:13, 4 October 2023
Line 1:		Line 1:

	==Crystal structure of an alpha,alpha-trehalose-phosphate synthase (UDP-forming) from Burkholderia vietnamiensis==		==Crystal structure of an alpha,alpha-trehalose-phosphate synthase (UDP-forming) from Burkholderia vietnamiensis==
-	<StructureSection load='5tvg' size='340' side='right' caption='[[5tvg]], [[Resolution\|resolution]] 2.30Å' scene=''>	+	<StructureSection load='5tvg' size='340' side='right'caption='[[5tvg]], [[Resolution\|resolution]] 2.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5tvg]] is a 8 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Burvg Burvg~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5TVG OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5TVG FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5tvg]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Burkholderia_vietnamiensis_G4 Burkholderia vietnamiensis G4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5TVG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5TVG FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat"~~><scene name~~=~~'pdbligand=GOL:GLYCEROL'>GOL</scene~~>, ~~<scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.3Å</td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat">~~Bcep1808_2483 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode~~=~~Info&srchmode~~=~~5&id=269482 BURVG])</td~~></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene></td></tr>
-	<~~tr id~~='~~activity'><td class~~=~~"sblockLbl"><b>Activity~~:~~</b~~></td><~~td class~~=~~"sblockDat"><span class~~=~~'plainlinks'>[http~~:~~//en.wikipedia.org/wiki/Alpha,alpha~~-~~trehalose~~-~~phosphate_synthase_(~~UDP~~-forming) Alpha,alpha-trehalose-phosphate synthase (UDP-forming)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.15 2.4.1.15]~~ </~~span~~></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5tvg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5tvg OCA], [https://pdbe.org/5tvg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5tvg RCSB], [https://www.ebi.ac.uk/pdbsum/5tvg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5tvg ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5tvg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5tvg OCA], [~~http~~://pdbe.org/5tvg PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5tvg RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5tvg PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5tvg ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/A4JGS8_BURVG A4JGS8_BURVG]] Catalyzes the transfer of glucose from UDP-glucose to glucose-6-phosphate to form alpha,alpha-1,1 trehalose-6-phosphate.[RuleBase:RU362045]	+	[https://www.uniprot.org/uniprot/A4JGS8_BURVG A4JGS8_BURVG] Catalyzes the transfer of glucose from UDP-glucose to glucose-6-phosphate to form alpha,alpha-1,1 trehalose-6-phosphate.[RuleBase:RU362045]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Burvg~~]]	+	[[Category: Burkholderia vietnamiensis G4]]
-	[[Category: ~~Structural genomic]]~~	+	[[Category: Large Structures]]
-	~~[[Category: Ssgcid]]~~	+
-	~~[[Category: Transferase~~]]	+

OCA at 10:19, 22 November 2017

OCA — Wed, 22 Nov 2017 10:19:00 GMT

←Older revision		Revision as of 10:19, 22 November 2017
Line 3:		Line 3:
	<StructureSection load='5tvg' size='340' side='right' caption='[[5tvg]], [[Resolution\|resolution]] 2.30Å' scene=''>		<StructureSection load='5tvg' size='340' side='right' caption='[[5tvg]], [[Resolution\|resolution]] 2.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5tvg]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5TVG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5TVG FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5tvg]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Burvg Burvg]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5TVG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5TVG FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Bcep1808_2483 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=269482 BURVG])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Alpha,alpha-trehalose-phosphate_synthase_(UDP-forming) Alpha,alpha-trehalose-phosphate synthase (UDP-forming)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.15 2.4.1.15] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Alpha,alpha-trehalose-phosphate_synthase_(UDP-forming) Alpha,alpha-trehalose-phosphate synthase (UDP-forming)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.15 2.4.1.15] </span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5tvg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5tvg OCA], [http://pdbe.org/5tvg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5tvg RCSB], [http://www.ebi.ac.uk/pdbsum/5tvg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5tvg ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5tvg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5tvg OCA], [http://pdbe.org/5tvg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5tvg RCSB], [http://www.ebi.ac.uk/pdbsum/5tvg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5tvg ProSAT]</span></td></tr>
Line 12:		Line 13:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Burvg]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Ssgcid]]		[[Category: Ssgcid]]
	[[Category: Transferase]]		[[Category: Transferase]]

OCA: Protected "5tvg" [edit=sysop:move=sysop]

OCA — Sat, 10 Dec 2016 03:32:14 GMT

Protected "5tvg" [edit=sysop:move=sysop]

←Older revision

Revision as of 03:32, 10 December 2016

OCA: New page: ==Crystal structure of an alpha,alpha-trehalose-phosphate synthase (UDP-forming) from Burkholderia vietnamiensis== == Structural highlights ==
<table><tr><td colspan='2'>[[5tvg]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5TVG OCA]. For a guided tour on the structure components use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5TVG FirstGlance]. 
</td></tr><tr id='ligand'><td class="sblockLbl">[[Ligand|Ligands:]]</td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene></td></tr>
<tr id='activity'><td class="sblockLbl">Activity:</td><td class="sblockDat">[http://en.wikipedia.org/wiki/Alpha,alpha-trehalose-phosphate_synthase_(UDP-forming) Alpha,alpha-trehalose-phosphate synthase (UDP-forming)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.15 2.4.1.15] </td></tr>
<tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5tvg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5tvg OCA], [http://pdbe.org/5tvg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5tvg RCSB], [http://www.ebi.ac.uk/pdbsum/5tvg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5tvg ProSAT]</td></tr>
</table>
== Function ==
[[http://www.uniprot.org/uniprot/A4JGS8_BURVG A4JGS8_BURVG]] Catalyzes the transfer of glucose from UDP-glucose to glucose-6-phosphate to form alpha,alpha-1,1 trehalose-6-phosphate.[RuleBase:RU362045]
TOC
</StructureSection>
[[Category: Structural genomic]]
[[Category: Ssgcid]]
[[Category: Transferase]]