5u5f - Revision history

OCA at 13:21, 4 October 2023

OCA — Wed, 04 Oct 2023 13:21:19 GMT

←Older revision		Revision as of 13:21, 4 October 2023
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	==MEDITOPE ENABLED TRASTUZUMAB I83E VARIANT IN COMPLEX WITH (Ac) CQFDA(PH)2STRRLRCGGSK==		==MEDITOPE ENABLED TRASTUZUMAB I83E VARIANT IN COMPLEX WITH (Ac) CQFDA(PH)2STRRLRCGGSK==
-	<StructureSection load='5u5f' size='340' side='right' caption='[[5u5f]], [[Resolution\|resolution]] 1.81Å' scene=''>	+	<StructureSection load='5u5f' size='340' side='right'caption='[[5u5f]], [[Resolution\|resolution]] 1.81Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5u5f]] is a 5 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~"diplococcus_magnus"_prevot_1933 "diplococcus magnus" prevot 1933~~], [~~http~~://en.wikipedia.org/wiki/~~"micrococcus_aureus"_(rosenbach_1884)_zopf_1885 "micrococcus~~ aureus~~" (rosenbach 1884) zopf 1885~~] and [~~http~~://en.wikipedia.org/wiki/~~Human Human~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5U5F OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5U5F FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5u5f]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Finegoldia_magna Finegoldia magna], [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens], [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5U5F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5U5F FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat">~~<scene name='pdbligand=MRY:MESO~~-~~ERYTHRITOL'>MRY</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.81Å</td></tr>
-	<tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"><scene name='pdbligand=2GX:BETA-PHENYL-L-PHENYLALANINE'>2GX</scene>, <scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene><~~/td></tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=2GX:BETA-PHENYL-L-PHENYLALANINE'>2GX</scene>, <scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=MRY:MESO-ERYTHRITOL'>MRY</scene></td></tr>
-	~~<tr id~~='~~related'><td class~~=~~"sblockLbl"><b>[[Related_structure\|Related~~:~~]]</b></td><td class="sblockDat">[[5u3d\|5u3d]], [[5u5m\|5u5m]], [[5u6a\|5u6a]]</td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5u5f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5u5f OCA], [https://pdbe.org/5u5f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5u5f RCSB], [https://www.ebi.ac.uk/pdbsum/5u5f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5u5f ProSAT]</span></td></tr>
-	~~<tr id='gene~~'>~~<td class="sblockLbl"><b>[[Gene\|Gene:]]~~</b>~~</td><td class="sblockDat">spa ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 "Micrococcus aureus" (Rosenbach 1884) Zopf 1885])~~</td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5u5f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5u5f OCA], [~~http~~://pdbe.org/5u5f PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5u5f RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5u5f PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5u5f ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q51918_FINMA Q51918_FINMA]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Diplococcus magnus prevot 1933~~]]	+	[[Category: Finegoldia magna]]
-	[[Category: ~~Human~~]]	+	[[Category: Homo sapiens]]
-	[[Category: ~~Avery, K N~~]]	+	[[Category: Large Structures]]
-	[[Category: ~~Bzymek, K P~~]]	+	[[Category: Staphylococcus aureus]]
-	[[Category: ~~Williams, J C~~]]	+	[[Category: Synthetic construct]]
-	[[Category: ~~Zer, C~~]]	+	[[Category: Avery KN]]
-	[[Category: ~~Immune system~~]]	+	[[Category: Bzymek KP]]
		+	[[Category: Williams JC]]
		+	[[Category: Zer C]]

OCA at 07:05, 28 March 2018

OCA — Wed, 28 Mar 2018 07:05:42 GMT

←Older revision		Revision as of 07:05, 28 March 2018
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	<StructureSection load='5u5f' size='340' side='right' caption='[[5u5f]], [[Resolution\|resolution]] 1.81Å' scene=''>		<StructureSection load='5u5f' size='340' side='right' caption='[[5u5f]], [[Resolution\|resolution]] 1.81Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5u5f]] is a 5 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5U5F OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5U5F FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5u5f]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/"diplococcus_magnus"_prevot_1933 "diplococcus magnus" prevot 1933], [http://en.wikipedia.org/wiki/"micrococcus_aureus"_(rosenbach_1884)_zopf_1885 "micrococcus aureus" (rosenbach 1884) zopf 1885] and [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5U5F OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5U5F FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MRY:MESO-ERYTHRITOL'>MRY</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MRY:MESO-ERYTHRITOL'>MRY</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=2GX:BETA-PHENYL-L-PHENYLALANINE'>2GX</scene>, <scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=2GX:BETA-PHENYL-L-PHENYLALANINE'>2GX</scene>, <scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5u3d\|5u3d]], [[5u5m\|5u5m]], [[5u6a\|5u6a]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5u3d\|5u3d]], [[5u5m\|5u5m]], [[5u6a\|5u6a]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">spa ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 "Micrococcus aureus" (Rosenbach 1884) Zopf 1885])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5u5f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5u5f OCA], [http://pdbe.org/5u5f PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5u5f RCSB], [http://www.ebi.ac.uk/pdbsum/5u5f PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5u5f ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5u5f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5u5f OCA], [http://pdbe.org/5u5f PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5u5f RCSB], [http://www.ebi.ac.uk/pdbsum/5u5f PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5u5f ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Diplococcus magnus prevot 1933]]
		+	[[Category: Human]]
	[[Category: Avery, K N]]		[[Category: Avery, K N]]
	[[Category: Bzymek, K P]]		[[Category: Bzymek, K P]]

OCA at 06:22, 14 March 2018

OCA — Wed, 14 Mar 2018 06:22:45 GMT

←Older revision		Revision as of 06:22, 14 March 2018
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry~~ 5u5f is ~~ON HOLD until Jun 01 2019~~	+	==MEDITOPE ENABLED TRASTUZUMAB I83E VARIANT IN COMPLEX WITH (Ac) CQFDA(PH)2STRRLRCGGSK==
-		+	<StructureSection load='5u5f' size='340' side='right' caption='[[5u5f]], [[Resolution\|resolution]] 1.81Å' scene=''>
-	~~Authors~~: ~~Bzymek~~, K.P., ~~Avery, K~~.N., ~~Zer~~, C., ~~Williams~~, J.C.	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[5u5f]] is a 5 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5U5F OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5U5F FirstGlance]. <br>
-	~~Description~~: ~~MEDITOPE ENABLED TRASTUZUMAB I83E VARIANT IN COMPLEX WITH (Ac) CQFDA(PH)2STRRLRCGGSK~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MRY:MESO-ERYTHRITOL'>MRY</scene></td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=2GX:BETA-PHENYL-L-PHENYLALANINE'>2GX</scene>, <scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5u3d\|5u3d]], [[5u5m\|5u5m]], [[5u6a\|5u6a]]</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5u5f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5u5f OCA], [http://pdbe.org/5u5f PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5u5f RCSB], [http://www.ebi.ac.uk/pdbsum/5u5f PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5u5f ProSAT]</span></td></tr>
		+	</table>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Avery, K N]]
		+	[[Category: Bzymek, K P]]
		+	[[Category: Williams, J C]]
	[[Category: Zer, C]]		[[Category: Zer, C]]
-	[[Category: ~~Avery, K.N]]~~	+	[[Category: Immune system]]
-	~~[[Category: Williams, J.C]]~~	+
-	~~[[Category: Bzymek, K.P~~]]	+

OCA at 03:33, 8 March 2018

OCA — Thu, 08 Mar 2018 03:33:35 GMT

←Older revision		Revision as of 03:33, 8 March 2018
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 5u5f is ON HOLD until ~~Mar 07~~ 2019	+	The entry 5u5f is ON HOLD until Jun 01 2019

	Authors: Bzymek, K.P., Avery, K.N., Zer, C., Williams, J.C.		Authors: Bzymek, K.P., Avery, K.N., Zer, C., Williams, J.C.

OCA at 04:52, 29 November 2017

OCA — Wed, 29 Nov 2017 04:52:37 GMT

←Older revision		Revision as of 04:52, 29 November 2017
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 5u5f is ON HOLD until ~~Paper Publication~~	+	The entry 5u5f is ON HOLD until Mar 07 2019

	Authors: Bzymek, K.P., Avery, K.N., Zer, C., Williams, J.C.		Authors: Bzymek, K.P., Avery, K.N., Zer, C., Williams, J.C.
Line 8:		Line 8:
	[[Category: Unreleased Structures]]		[[Category: Unreleased Structures]]
	[[Category: Zer, C]]		[[Category: Zer, C]]
-	[[Category: Bzymek, K.P]]
-	[[Category: Williams, J.C]]
	[[Category: Avery, K.N]]		[[Category: Avery, K.N]]
		+	[[Category: Williams, J.C]]
		+	[[Category: Bzymek, K.P]]

OCA at 13:32, 27 September 2017

OCA — Wed, 27 Sep 2017 13:32:58 GMT

←Older revision		Revision as of 13:32, 27 September 2017
Line 9:		Line 9:
	[[Category: Zer, C]]		[[Category: Zer, C]]
	[[Category: Bzymek, K.P]]		[[Category: Bzymek, K.P]]
-	[[Category: Avery, K.N]]
	[[Category: Williams, J.C]]		[[Category: Williams, J.C]]
		+	[[Category: Avery, K.N]]

OCA at 14:11, 9 March 2017

OCA — Thu, 09 Mar 2017 14:11:02 GMT

←Older revision		Revision as of 14:11, 9 March 2017
Line 9:		Line 9:
	[[Category: Zer, C]]		[[Category: Zer, C]]
	[[Category: Bzymek, K.P]]		[[Category: Bzymek, K.P]]
-	[[Category: Williams, J.C]]
	[[Category: Avery, K.N]]		[[Category: Avery, K.N]]
		+	[[Category: Williams, J.C]]

OCA at 20:24, 22 December 2016

OCA — Thu, 22 Dec 2016 20:24:58 GMT

←Older revision		Revision as of 20:24, 22 December 2016
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 5u5f is ON HOLD	+	The entry 5u5f is ON HOLD until Paper Publication

	Authors: Bzymek, K.P., Avery, K.N., Zer, C., Williams, J.C.		Authors: Bzymek, K.P., Avery, K.N., Zer, C., Williams, J.C.

OCA: Protected "5u5f" [edit=sysop:move=sysop]

OCA — Thu, 15 Dec 2016 17:41:58 GMT

Protected "5u5f" [edit=sysop:move=sysop]

←Older revision

Revision as of 17:41, 15 December 2016

OCA: New page: '''Unreleased structure''' The entry 5u5f is ON HOLD Authors: Bzymek, K.P., Avery, K.N., Zer, C., Williams, J.C. Description: MEDITOPE ENABLED TRASTUZUMAB I83E VARIANT IN COMPLEX WITH ...

OCA — Thu, 15 Dec 2016 17:41:57 GMT

New page: '''Unreleased structure''' The entry 5u5f is ON HOLD Authors: Bzymek, K.P., Avery, K.N., Zer, C., Williams, J.C. Description: MEDITOPE ENABLED TRASTUZUMAB I83E VARIANT IN COMPLEX WITH ...

New page

'''Unreleased structure'''

The entry 5u5f is ON HOLD

Authors: Bzymek, K.P., Avery, K.N., Zer, C., Williams, J.C.

Description: MEDITOPE ENABLED TRASTUZUMAB I83E VARIANT IN COMPLEX WITH (Ac) CQFDA(PH)2STRRLRCGGSK
[[Category: Unreleased Structures]]
[[Category: Zer, C]]
[[Category: Bzymek, K.P]]
[[Category: Williams, J.C]]
[[Category: Avery, K.N]]