5umh - Revision history

OCA at 13:29, 4 October 2023

OCA — Wed, 04 Oct 2023 13:29:56 GMT

←Older revision		Revision as of 13:29, 4 October 2023
Line 3:		Line 3:
	<StructureSection load='5umh' size='340' side='right'caption='[[5umh]], [[Resolution\|resolution]] 1.35Å' scene=''>		<StructureSection load='5umh' size='340' side='right'caption='[[5umh]], [[Resolution\|resolution]] 1.35Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5umh]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Burm1 Burm1~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UMH OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=5UMH FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5umh]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Burkholderia_multivorans_ATCC_17616 Burkholderia multivorans ATCC 17616]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UMH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5UMH FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PG6:1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE'>PG6</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene~~></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.35Å</td></tr>
-	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">catA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=395019 BURM1])</td></tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PG6:1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE'>PG6</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Catechol_1,2-dioxygenase Catechol 1,2-dioxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.13.11.1 1.13.11.1] </span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5umh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5umh OCA], [https://pdbe.org/5umh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5umh RCSB], [https://www.ebi.ac.uk/pdbsum/5umh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5umh ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=5umh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5umh OCA], [~~http~~://pdbe.org/5umh PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5umh RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5umh PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5umh ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/A0A0H3KXJ8_BURM1 A0A0H3KXJ8_BURM1]

	==See Also==		==See Also==
Line 14:		Line 15:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Burm1]]~~	+	[[Category: Burkholderia multivorans ATCC 17616]]
-	~~[[Category: Catechol 1,2-dioxygenase~~]]	+
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Structural genomic]]
-	[[Category: Alpha/beta fold]]
-	[[Category: Aromatic hydrocarbon degradation]]
-	[[Category: Dioxygenase]]
-	[[Category: Oxidoreductase]]
-	[[Category: Ssgcid]]

OCA at 12:39, 23 September 2020

OCA — Wed, 23 Sep 2020 12:39:50 GMT

←Older revision		Revision as of 12:39, 23 September 2020
Line 1:		Line 1:

	==Crystal Structure of Catechol 1,2-dioxygenase protein from Burkholderia multivorans==		==Crystal Structure of Catechol 1,2-dioxygenase protein from Burkholderia multivorans==
-	<StructureSection load='5umh' size='340' side='right' caption='[[5umh]], [[Resolution\|resolution]] 1.35Å' scene=''>	+	<StructureSection load='5umh' size='340' side='right'caption='[[5umh]], [[Resolution\|resolution]] 1.35Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5umh]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UMH OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5UMH FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5umh]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Burm1 Burm1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UMH OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5UMH FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PG6:1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE'>PG6</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PG6:1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE'>PG6</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">catA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=395019 BURM1])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Catechol_1,2-dioxygenase Catechol 1,2-dioxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.13.11.1 1.13.11.1] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Catechol_1,2-dioxygenase Catechol 1,2-dioxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.13.11.1 1.13.11.1] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5umh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5umh OCA], [http://pdbe.org/5umh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5umh RCSB], [http://www.ebi.ac.uk/pdbsum/5umh PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5umh ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5umh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5umh OCA], [http://pdbe.org/5umh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5umh RCSB], [http://www.ebi.ac.uk/pdbsum/5umh PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5umh ProSAT]</span></td></tr>
	</table>		</table>
		+
		+	==See Also==
		+	*[[Dioxygenase 3D structures\|Dioxygenase 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Burm1]]
	[[Category: Catechol 1,2-dioxygenase]]		[[Category: Catechol 1,2-dioxygenase]]
		+	[[Category: Large Structures]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Alpha/beta fold]]		[[Category: Alpha/beta fold]]

OCA: Protected "5umh" [edit=sysop:move=sysop]

OCA — Fri, 10 Mar 2017 17:47:34 GMT

Protected "5umh" [edit=sysop:move=sysop]

←Older revision

Revision as of 17:47, 10 March 2017

OCA: New page: ==Crystal Structure of Catechol 1,2-dioxygenase protein from Burkholderia multivorans== == Structural highlights ==
<table><tr><td colspan='2'>[[5umh]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UMH OCA]. For a guided tour on the structure components use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5UMH FirstGlance]. 
</td></tr><tr id='ligand'><td class="sblockLbl">[[Ligand|Ligands:]]</td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PG6:1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE'>PG6</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='activity'><td class="sblockLbl">Activity:</td><td class="sblockDat">[http://en.wikipedia.org/wiki/Catechol_1,2-dioxygenase Catechol 1,2-dioxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.13.11.1 1.13.11.1] </td></tr>
<tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5umh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5umh OCA], [http://pdbe.org/5umh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5umh RCSB], [http://www.ebi.ac.uk/pdbsum/5umh PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5umh ProSAT]</td></tr>
</table>
TOC
</StructureSection>
[[Category: Catechol 1,2-dioxygenase]]
[[Category: Structural genomic]]
[[Category: Alpha/beta fold]]
[[Category: Aromatic hydrocarbon degradation]]
[[Category: Dioxygenase]]
[[Category: Oxidoreductase]]
[[Category: Ssgcid]]