5uvj - Revision history

OCA at 13:35, 4 October 2023

OCA — Wed, 04 Oct 2023 13:35:20 GMT

←Older revision		Revision as of 13:35, 4 October 2023
Line 3:		Line 3:
	<StructureSection load='5uvj' size='340' side='right'caption='[[5uvj]], [[Resolution\|resolution]] 2.05Å' scene=''>		<StructureSection load='5uvj' size='340' side='right'caption='[[5uvj]], [[Resolution\|resolution]] 2.05Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5uvj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Chick Chick~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UVJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5UVJ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5uvj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UVJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5UVJ FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>~~, ~~<scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.05Å</td></tr>
-	~~<tr id='related'><td class="sblockLbl"><b>~~[[~~Related_structure~~\|~~Related:~~]]~~</b></td><td class="sblockDat"><div style='overflow: auto~~; ~~max-height: 3em;'>[[5uvi\|5uvi]], [[5uvk\|5uvk]], [[5uvl\|5uvl]]</div>~~</td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat"~~>LYZ ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&~~id=~~9031 CHICK])</td~~><~~/tr>~~	+
-	~~<tr id~~='~~activity'><td class~~=~~"sblockLbl"><b>Activity~~:~~</b~~></td><~~td class~~=~~"sblockDat"><span class~~=~~'plainlinks~~'>~~[https://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17]~~ </~~span~~></td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5uvj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5uvj OCA], [https://pdbe.org/5uvj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5uvj RCSB], [https://www.ebi.ac.uk/pdbsum/5uvj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5uvj ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5uvj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5uvj OCA], [https://pdbe.org/5uvj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5uvj RCSB], [https://www.ebi.ac.uk/pdbsum/5uvj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5uvj ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK]] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>	+	[https://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 28:		Line 26:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Chick~~]]	+	[[Category: Gallus gallus]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	~~[[Category: Lysozyme]]~~	+	[[Category: Cherezov V]]
-	[[Category: Cherezov, V]]	+	[[Category: Chun E]]
-	[[Category: Chun, E]]	+	[[Category: Coe J]]
-	[[Category: Coe, J]]	+	[[Category: Conrad CE]]
-	[[Category: Conrad~~, C E~~]]	+	[[Category: Corcoran S]]
-	[[Category: Corcoran, S]]	+	[[Category: Ferguson D]]
-	[[Category: Ferguson, D]]	+	[[Category: Fischetti RF]]
-	[[Category: Fischetti~~, R F~~]]	+	[[Category: Fromme P]]
-	[[Category: Fromme, P]]	+	[[Category: Geiger J]]
-	[[Category: Geiger, J]]	+	[[Category: Hilgart MC]]
-	[[Category: Hilgart~~, M C~~]]	+	[[Category: Ishchenko A]]
-	[[Category: Ishchenko, A]]	+	[[Category: James D]]
-	[[Category: James, D]]	+	[[Category: Ketawala G]]
-	[[Category: Ketawala, G]]	+	[[Category: Kissick D]]
-	[[Category: Kissick, D]]	+	[[Category: Liu W]]
-	[[Category: Liu, W]]	+	[[Category: Martin-Garcia JM]]
-	[[Category: Martin-Garcia~~, J M~~]]	+	[[Category: Nagaratnam N]]
-	[[Category: Nagaratnam, N]]	+	[[Category: Nelson G]]
-	[[Category: Nelson, G]]	+	[[Category: Ogata C]]
-	[[Category: Ogata, C]]	+	[[Category: Roy-Chowdhury S]]
-	[[Category: Roy-Chowdhury, S]]	+	[[Category: Schaffer A]]
-	[[Category: Schaffer, A]]	+	[[Category: Spence JCH]]
-	[[Category: Spence~~, J C.H~~]]	+	[[Category: Stander N]]
-	[[Category: Stander, N]]	+	[[Category: Subramanian G]]
-	[[Category: Subramanian, G]]	+	[[Category: Venugopalan N]]
-	[[Category: Venugopalan, N]]	+	[[Category: Weierstall U]]
-	[[Category: Weierstall, U]]	+	[[Category: Xu S]]
-	[[Category: Xu, S]]	+	[[Category: Zatsepin NA]]
-	[[Category: Zatsepin~~, N A~~]]	+	[[Category: Zhu L]]
-	[[Category: Zhu, L]]	+	[[Category: Zook J]]
-	[[Category: Zook, J]]	+
-	~~[[Category: Hydrolase~~]]	+

OCA at 10:13, 13 April 2022

OCA — Wed, 13 Apr 2022 10:13:58 GMT

OCA at 09:32, 4 December 2019

OCA — Wed, 04 Dec 2019 09:32:03 GMT

←Older revision		Revision as of 09:32, 4 December 2019
Line 1:		Line 1:

	==Serial Millisecond Crystallography of Membrane and Soluble Protein Micro-crystals using Synchrotron Radiation==		==Serial Millisecond Crystallography of Membrane and Soluble Protein Micro-crystals using Synchrotron Radiation==
-	<StructureSection load='5uvj' size='340' side='right' caption='[[5uvj]], [[Resolution\|resolution]] 2.05Å' scene=''>	+	<StructureSection load='5uvj' size='340' side='right'caption='[[5uvj]], [[Resolution\|resolution]] 2.05Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[5uvj]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Chick Chick]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UVJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5UVJ FirstGlance]. <br>		<table><tr><td colspan='2'>[[5uvj]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Chick Chick]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UVJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5UVJ FirstGlance]. <br>
Line 21:		Line 21:
	</div>		</div>
	<div class="pdbe-citations 5uvj" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 5uvj" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Lysozyme 3D structures\|Lysozyme 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
Line 26:		Line 29:
	</StructureSection>		</StructureSection>
	[[Category: Chick]]		[[Category: Chick]]
		+	[[Category: Large Structures]]
	[[Category: Lysozyme]]		[[Category: Lysozyme]]
	[[Category: Cherezov, V]]		[[Category: Cherezov, V]]

OCA at 06:35, 18 April 2018

OCA — Wed, 18 Apr 2018 06:35:56 GMT

←Older revision		Revision as of 06:35, 18 April 2018
Line 12:		Line 12:
	== Function ==		== Function ==
	[[http://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK]] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>		[[http://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK]] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Crystal structure determination of biological macromolecules using the novel technique of serial femtosecond crystallography (SFX) is severely limited by the scarcity of X-ray free-electron laser (XFEL) sources. However, recent and future upgrades render microfocus beamlines at synchrotron-radiation sources suitable for room-temperature serial crystallography data collection also. Owing to the longer exposure times that are needed at synchrotrons, serial data collection is termed serial millisecond crystallography (SMX). As a result, the number of SMX experiments is growing rapidly, with a dozen experiments reported so far. Here, the first high-viscosity injector-based SMX experiments carried out at a US synchrotron source, the Advanced Photon Source (APS), are reported. Microcrystals (5-20 microm) of a wide variety of proteins, including lysozyme, thaumatin, phycocyanin, the human A2A adenosine receptor (A2AAR), the soluble fragment of the membrane lipoprotein Flpp3 and proteinase K, were screened. Crystals suspended in lipidic cubic phase (LCP) or a high-molecular-weight poly(ethylene oxide) (PEO; molecular weight 8 000 000) were delivered to the beam using a high-viscosity injector. In-house data-reduction (hit-finding) software developed at APS as well as the SFX data-reduction and analysis software suites Cheetah and CrystFEL enabled efficient on-site SMX data monitoring, reduction and processing. Complete data sets were collected for A2AAR, phycocyanin, Flpp3, proteinase K and lysozyme, and the structures of A2AAR, phycocyanin, proteinase K and lysozyme were determined at 3.2, 3.1, 2.65 and 2.05 A resolution, respectively. The data demonstrate the feasibility of serial millisecond crystallography from 5-20 microm crystals using a high-viscosity injector at APS. The resolution of the crystal structures obtained in this study was dictated by the current flux density and crystal size, but upcoming developments in beamline optics and the planned APS-U upgrade will increase the intensity by two orders of magnitude. These developments will enable structure determination from smaller and/or weakly diffracting microcrystals.
		+
		+	Serial millisecond crystallography of membrane and soluble protein microcrystals using synchrotron radiation.,Martin-Garcia JM, Conrad CE, Nelson G, Stander N, Zatsepin NA, Zook J, Zhu L, Geiger J, Chun E, Kissick D, Hilgart MC, Ogata C, Ishchenko A, Nagaratnam N, Roy-Chowdhury S, Coe J, Subramanian G, Schaffer A, James D, Ketwala G, Venugopalan N, Xu S, Corcoran S, Ferguson D, Weierstall U, Spence JCH, Cherezov V, Fromme P, Fischetti RF, Liu W IUCrJ. 2017 May 24;4(Pt 4):439-454. doi: 10.1107/S205225251700570X. eCollection, 2017 Jul 1. PMID:28875031<ref>PMID:28875031</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 5uvj" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 10:27, 22 November 2017

OCA — Wed, 22 Nov 2017 10:27:28 GMT

←Older revision		Revision as of 10:27, 22 November 2017
Line 3:		Line 3:
	<StructureSection load='5uvj' size='340' side='right' caption='[[5uvj]], [[Resolution\|resolution]] 2.05Å' scene=''>		<StructureSection load='5uvj' size='340' side='right' caption='[[5uvj]], [[Resolution\|resolution]] 2.05Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5uvj]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UVJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5UVJ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5uvj]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Chick Chick]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UVJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5UVJ FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5uvi\|5uvi]], [[5uvk\|5uvk]], [[5uvl\|5uvl]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5uvi\|5uvi]], [[5uvk\|5uvk]], [[5uvl\|5uvl]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LYZ ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9031 CHICK])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5uvj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5uvj OCA], [http://pdbe.org/5uvj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5uvj RCSB], [http://www.ebi.ac.uk/pdbsum/5uvj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5uvj ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5uvj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5uvj OCA], [http://pdbe.org/5uvj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5uvj RCSB], [http://www.ebi.ac.uk/pdbsum/5uvj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5uvj ProSAT]</span></td></tr>
Line 15:		Line 16:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Chick]]
	[[Category: Lysozyme]]		[[Category: Lysozyme]]
	[[Category: Cherezov, V]]		[[Category: Cherezov, V]]

OCA at 13:50, 24 May 2017

OCA — Wed, 24 May 2017 13:50:11 GMT

←Older revision		Revision as of 13:50, 24 May 2017
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry~~ 5uvj ~~is ON HOLD until Paper Publication~~	+	==Serial Millisecond Crystallography of Membrane and Soluble Protein Micro-crystals using Synchrotron Radiation==
-		+	<StructureSection load='5uvj' size='340' side='right' caption='[[5uvj]], [[Resolution\|resolution]] 2.05Å' scene=''>
-	~~Authors~~: ~~Martin-Garcia, J~~.M.~~, Conrad, C~~.E.~~, Nelson, G~~.~~, Stander, N~~.~~, Zatsepin, N~~.A.~~, Zook, J~~., ~~Zhu~~, L., ~~Geiger, J~~.~~, Chun, E~~., ~~Kissick, D~~.~~, Hilgart, M~~.C.~~, Ogata, C~~.~~, Ishchenko, A~~.~~, Nagaratnam, N~~.~~, Roy-Chowdhury, S~~.~~, Coe, J~~.~~, Subramanian, G~~.~~, Schaffer, A~~.~~, James, D~~.~~, Ketawala, G~~.~~, Venugopalan, N~~., ~~Xu, S~~.~~, Corcoran, S~~.~~, Ferguson, D~~., ~~Weierstall, U~~., ~~Spence, J~~.C.H., ~~Cherezov, V~~.~~, Fromme, P~~.~~, Fischetti, R~~.~~F., Liu~~, W.	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[5uvj]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UVJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5UVJ FirstGlance]. <br>
-	~~Description~~: ~~Serial Millisecond Crystallography of Membrane~~ and ~~Soluble Protein Micro~~-~~crystals using Synchrotron Radiation~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5uvi\|5uvi]], [[5uvk\|5uvk]], [[5uvl\|5uvl]]</td></tr>
-	[[Category: ~~Stander~~, N]]	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr>
-	[[Category: ~~Liu~~, W]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5uvj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5uvj OCA], [http://pdbe.org/5uvj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5uvj RCSB], [http://www.ebi.ac.uk/pdbsum/5uvj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5uvj ProSAT]</span></td></tr>
-	[[Category: ~~Spence~~, J.C.H]]	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK]] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Lysozyme]]
		+	[[Category: Cherezov, V]]
		+	[[Category: Chun, E]]
		+	[[Category: Coe, J]]
		+	[[Category: Conrad, C E]]
		+	[[Category: Corcoran, S]]
	[[Category: Ferguson, D]]		[[Category: Ferguson, D]]
-	[[Category: ~~Corcoran~~, ~~S]]~~	+	[[Category: Fischetti, R F]]
-	~~[[Category: Chun, E~~]]	+
	[[Category: Fromme, P]]		[[Category: Fromme, P]]
		+	[[Category: Geiger, J]]
		+	[[Category: Hilgart, M C]]
		+	[[Category: Ishchenko, A]]
	[[Category: James, D]]		[[Category: James, D]]
-	[[Category: ~~Roy~~-~~Chowdhury~~, S]]	+	[[Category: Ketawala, G]]
		+	[[Category: Kissick, D]]
		+	[[Category: Liu, W]]
		+	[[Category: Martin-Garcia, J M]]
		+	[[Category: Nagaratnam, N]]
	[[Category: Nelson, G]]		[[Category: Nelson, G]]
-	[[Category: Xu, S]]
-	[[Category: Weierstall, U]]
-	[[Category: Venugopalan, N]]
-	[[Category: Coe, J]]
-	[[Category: Ishchenko, A]]
-	[[Category: Fischetti, R.F]]
-	[[Category: Hilgart, M.C]]
-	[[Category: Conrad, C.E]]
	[[Category: Ogata, C]]		[[Category: Ogata, C]]
-	[[Category: ~~Kissick~~, ~~D]]~~	+	[[Category: Roy-Chowdhury, S]]
-	~~[[Category: Geiger, J~~]]	+
	[[Category: Schaffer, A]]		[[Category: Schaffer, A]]
-	[[Category: ~~Nagaratnam~~, N]]	+	[[Category: Spence, J C.H]]
		+	[[Category: Stander, N]]
	[[Category: Subramanian, G]]		[[Category: Subramanian, G]]
-	[[Category: ~~Ketawala~~, G]]	+	[[Category: Venugopalan, N]]
-	[[Category: ~~Martin-Garcia~~, ~~J.M~~]]	+	[[Category: Weierstall, U]]
-	[[Category: ~~Cherezov~~, V]]	+	[[Category: Xu, S]]
		+	[[Category: Zatsepin, N A]]
	[[Category: Zhu, L]]		[[Category: Zhu, L]]
	[[Category: Zook, J]]		[[Category: Zook, J]]
-	[[Category: ~~Zatsepin, N.A~~]]	+	[[Category: Hydrolase]]

OCA at 19:25, 15 March 2017

OCA — Wed, 15 Mar 2017 19:25:29 GMT

←Older revision		Revision as of 19:25, 15 March 2017
Line 7:		Line 7:
	Description: Serial Millisecond Crystallography of Membrane and Soluble Protein Micro-crystals using Synchrotron Radiation		Description: Serial Millisecond Crystallography of Membrane and Soluble Protein Micro-crystals using Synchrotron Radiation
	[[Category: Unreleased Structures]]		[[Category: Unreleased Structures]]
		+	[[Category: Stander, N]]
		+	[[Category: Liu, W]]
	[[Category: Spence, J.C.H]]		[[Category: Spence, J.C.H]]
		+	[[Category: Ferguson, D]]
	[[Category: Corcoran, S]]		[[Category: Corcoran, S]]
	[[Category: Chun, E]]		[[Category: Chun, E]]
	[[Category: Fromme, P]]		[[Category: Fromme, P]]
		+	[[Category: James, D]]
		+	[[Category: Roy-Chowdhury, S]]
		+	[[Category: Nelson, G]]
		+	[[Category: Xu, S]]
	[[Category: Weierstall, U]]		[[Category: Weierstall, U]]
		+	[[Category: Venugopalan, N]]
		+	[[Category: Coe, J]]
	[[Category: Ishchenko, A]]		[[Category: Ishchenko, A]]
		+	[[Category: Fischetti, R.F]]
	[[Category: Hilgart, M.C]]		[[Category: Hilgart, M.C]]
	[[Category: Conrad, C.E]]		[[Category: Conrad, C.E]]
	[[Category: Ogata, C]]		[[Category: Ogata, C]]
	[[Category: Kissick, D]]		[[Category: Kissick, D]]
		+	[[Category: Geiger, J]]
	[[Category: Schaffer, A]]		[[Category: Schaffer, A]]
		+	[[Category: Nagaratnam, N]]
	[[Category: Subramanian, G]]		[[Category: Subramanian, G]]
		+	[[Category: Ketawala, G]]
	[[Category: Martin-Garcia, J.M]]		[[Category: Martin-Garcia, J.M]]
		+	[[Category: Cherezov, V]]
	[[Category: Zhu, L]]		[[Category: Zhu, L]]
	[[Category: Zook, J]]		[[Category: Zook, J]]
	[[Category: Zatsepin, N.A]]		[[Category: Zatsepin, N.A]]
-	[[Category: Stander, N]]
-	[[Category: Liu, W]]
-	[[Category: Ferguson, D]]
-	[[Category: James, D]]
-	[[Category: Roy-Chowdhury, S]]
-	[[Category: Nelson, G]]
-	[[Category: Xu, S]]
-	[[Category: Venugopalan, N]]
-	[[Category: Coe, J]]
-	[[Category: Fischetti, R.F]]
-	[[Category: Geiger, J]]
-	[[Category: Nagaratnam, N]]
-	[[Category: Ketawala, G]]
-	[[Category: Cherezov, V]]

OCA: Protected "5uvj" [edit=sysop:move=sysop]

OCA — Thu, 09 Mar 2017 14:59:29 GMT

Protected "5uvj" [edit=sysop:move=sysop]

←Older revision

Revision as of 14:59, 9 March 2017

OCA: New page: '''Unreleased structure''' The entry 5uvj is ON HOLD until Paper Publication Authors: Martin-Garcia, J.M., Conrad, C.E., Nelson, G., Stander, N., Zatsepin, N.A., Zook, J., Zhu, L., Geig...

OCA — Thu, 09 Mar 2017 14:59:27 GMT

New page: '''Unreleased structure''' The entry 5uvj is ON HOLD until Paper Publication Authors: Martin-Garcia, J.M., Conrad, C.E., Nelson, G., Stander, N., Zatsepin, N.A., Zook, J., Zhu, L., Geig...

New page

'''Unreleased structure'''

The entry 5uvj is ON HOLD until Paper Publication

Authors: Martin-Garcia, J.M., Conrad, C.E., Nelson, G., Stander, N., Zatsepin, N.A., Zook, J., Zhu, L., Geiger, J., Chun, E., Kissick, D., Hilgart, M.C., Ogata, C., Ishchenko, A., Nagaratnam, N., Roy-Chowdhury, S., Coe, J., Subramanian, G., Schaffer, A., James, D., Ketawala, G., Venugopalan, N., Xu, S., Corcoran, S., Ferguson, D., Weierstall, U., Spence, J.C.H., Cherezov, V., Fromme, P., Fischetti, R.F., Liu, W.

Description: Serial Millisecond Crystallography of Membrane and Soluble Protein Micro-crystals using Synchrotron Radiation
[[Category: Unreleased Structures]]
[[Category: Spence, J.C.H]]
[[Category: Corcoran, S]]
[[Category: Chun, E]]
[[Category: Fromme, P]]
[[Category: Weierstall, U]]
[[Category: Ishchenko, A]]
[[Category: Hilgart, M.C]]
[[Category: Conrad, C.E]]
[[Category: Ogata, C]]
[[Category: Kissick, D]]
[[Category: Schaffer, A]]
[[Category: Subramanian, G]]
[[Category: Martin-Garcia, J.M]]
[[Category: Zhu, L]]
[[Category: Zook, J]]
[[Category: Zatsepin, N.A]]
[[Category: Stander, N]]
[[Category: Liu, W]]
[[Category: Ferguson, D]]
[[Category: James, D]]
[[Category: Roy-Chowdhury, S]]
[[Category: Nelson, G]]
[[Category: Xu, S]]
[[Category: Venugopalan, N]]
[[Category: Coe, J]]
[[Category: Fischetti, R.F]]
[[Category: Geiger, J]]
[[Category: Nagaratnam, N]]
[[Category: Ketawala, G]]
[[Category: Cherezov, V]]

←Older revision		Revision as of 10:13, 13 April 2022
Line 3:		Line 3:
	<StructureSection load='5uvj' size='340' side='right'caption='[[5uvj]], [[Resolution\|resolution]] 2.05Å' scene=''>		<StructureSection load='5uvj' size='340' side='right'caption='[[5uvj]], [[Resolution\|resolution]] 2.05Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5uvj]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Chick Chick]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UVJ OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5UVJ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5uvj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Chick Chick]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UVJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5UVJ FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5uvi\|5uvi]], [[5uvk\|5uvk]], [[5uvl\|5uvl]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[5uvi\|5uvi]], [[5uvk\|5uvk]], [[5uvl\|5uvl]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LYZ ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9031 CHICK])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LYZ ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9031 CHICK])</td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5uvj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5uvj OCA], [~~http~~://pdbe.org/5uvj PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5uvj RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5uvj PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5uvj ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5uvj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5uvj OCA], [https://pdbe.org/5uvj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5uvj RCSB], [https://www.ebi.ac.uk/pdbsum/5uvj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5uvj ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK]] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>	+	[[https://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK]] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==