5vl1 - Revision history

OCA at 13:50, 4 October 2023

OCA — Wed, 04 Oct 2023 13:50:48 GMT

←Older revision		Revision as of 13:50, 4 October 2023
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	<StructureSection load='5vl1' size='340' side='right'caption='[[5vl1]], [[Resolution\|resolution]] 2.70Å' scene=''>		<StructureSection load='5vl1' size='340' side='right'caption='[[5vl1]], [[Resolution\|resolution]] 2.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5vl1]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Mycua Mycua~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VL1 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=5VL1 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5vl1]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_ulcerans_Agy99 Mycobacterium ulcerans Agy99]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VL1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5VL1 FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=LYS:LYSINE'>LYS</scene>~~, ~~<scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.7Å</td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat">~~lysS, MUL_4181 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode~~=~~Info&srchmode~~=~~5&id=362242 MYCUA])</td~~></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LYS:LYSINE'>LYS</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>
-	<~~tr id~~='~~activity'><td class~~=~~"sblockLbl"><b>Activity~~:~~</b~~></td><~~td class~~=~~"sblockDat"><span class~~=~~'plainlinks~~'>~~[http://en.wikipedia.org/wiki/Lysine--tRNA_ligase Lysine--tRNA ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.1.1.6 6.1.1.6]~~ </~~span~~></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5vl1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vl1 OCA], [https://pdbe.org/5vl1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5vl1 RCSB], [https://www.ebi.ac.uk/pdbsum/5vl1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5vl1 ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=5vl1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vl1 OCA], [~~http~~://pdbe.org/5vl1 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5vl1 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5vl1 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5vl1 ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/A0PV47_MYCUA A0PV47_MYCUA]

	==See Also==		==See Also==
Line 15:		Line 16:
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Lysine--tRNA ligase]]~~	+	[[Category: Mycobacterium ulcerans Agy99]]
-	~~[[Category: Mycua]]~~	+
-	~~[[Category: Structural genomic]]~~	+
-	~~[[Category: Ligase]]~~	+
-	~~[[Category: Ssgcid]]~~	+
-	~~[[Category: Synthetase~~]]	+

OCA at 08:38, 30 September 2020

OCA — Wed, 30 Sep 2020 08:38:49 GMT

←Older revision		Revision as of 08:38, 30 September 2020
Line 1:		Line 1:

	==Crystal Structure of Lysyl-tRNA Synthetase from Mycobacterium ulcerans complexed with L-lysine==		==Crystal Structure of Lysyl-tRNA Synthetase from Mycobacterium ulcerans complexed with L-lysine==
-	<StructureSection load='5vl1' size='340' side='right' caption='[[5vl1]], [[Resolution\|resolution]] 2.70Å' scene=''>	+	<StructureSection load='5vl1' size='340' side='right'caption='[[5vl1]], [[Resolution\|resolution]] 2.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5vl1]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VL1 OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5VL1 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5vl1]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Mycua Mycua]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VL1 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5VL1 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=LYS:LYSINE'>LYS</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LYS:LYSINE'>LYS</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">lysS, MUL_4181 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=362242 MYCUA])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysine--tRNA_ligase Lysine--tRNA ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.1.1.6 6.1.1.6] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysine--tRNA_ligase Lysine--tRNA ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.1.1.6 6.1.1.6] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5vl1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vl1 OCA], [http://pdbe.org/5vl1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5vl1 RCSB], [http://www.ebi.ac.uk/pdbsum/5vl1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5vl1 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5vl1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vl1 OCA], [http://pdbe.org/5vl1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5vl1 RCSB], [http://www.ebi.ac.uk/pdbsum/5vl1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5vl1 ProSAT]</span></td></tr>
	</table>		</table>
		+
		+	==See Also==
		+	*[[Aminoacyl tRNA synthetase 3D structures\|Aminoacyl tRNA synthetase 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Lysine--tRNA ligase]]		[[Category: Lysine--tRNA ligase]]
		+	[[Category: Mycua]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Ligase]]		[[Category: Ligase]]
	[[Category: Ssgcid]]		[[Category: Ssgcid]]
	[[Category: Synthetase]]		[[Category: Synthetase]]

OCA at 13:02, 10 May 2017

OCA — Wed, 10 May 2017 13:02:54 GMT

←Older revision		Revision as of 13:02, 10 May 2017
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry 5vl1 is ON HOLD~~	+	==Crystal Structure of Lysyl-tRNA Synthetase from Mycobacterium ulcerans complexed with L-lysine==
-		+	<StructureSection load='5vl1' size='340' side='right' caption='[[5vl1]], [[Resolution\|resolution]] 2.70Å' scene=''>
-	~~Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[5vl1]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VL1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5VL1 FirstGlance]. <br>
-	~~Description:~~ Crystal Structure of Lysyl-tRNA Synthetase from Mycobacterium ulcerans complexed with L-lysine	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=LYS:LYSINE'>LYS</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysine--tRNA_ligase Lysine--tRNA ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.1.1.6 6.1.1.6] </span></td></tr>
-	[[Category: ~~Seattle~~ Structural ~~Genomics Center For Infectious Disease (~~Ssgcid)]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5vl1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vl1 OCA], [http://pdbe.org/5vl1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5vl1 RCSB], [http://www.ebi.ac.uk/pdbsum/5vl1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5vl1 ProSAT]</span></td></tr>
		+	</table>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Lysine--tRNA ligase]]
		+	[[Category: Structural genomic]]
		+	[[Category: Ligase]]
		+	[[Category: Ssgcid]]
		+	[[Category: Synthetase]]

OCA: Protected "5vl1" [edit=sysop:move=sysop]

OCA — Thu, 04 May 2017 11:25:49 GMT

Protected "5vl1" [edit=sysop:move=sysop]

←Older revision

Revision as of 11:25, 4 May 2017

OCA: New page: '''Unreleased structure''' The entry 5vl1 is ON HOLD Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID) Description: Crystal Structure of Lysyl-tRNA Synthetase...

OCA — Thu, 04 May 2017 11:25:48 GMT

New page: '''Unreleased structure''' The entry 5vl1 is ON HOLD Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID) Description: Crystal Structure of Lysyl-tRNA Synthetase...

New page

'''Unreleased structure'''

The entry 5vl1 is ON HOLD

Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Description: Crystal Structure of Lysyl-tRNA Synthetase from Mycobacterium ulcerans complexed with L-lysine
[[Category: Unreleased Structures]]
[[Category: Seattle Structural Genomics Center For Infectious Disease (Ssgcid)]]