5w7l - Revision history

OCA: Redirecting to 8g1n

OCA — Wed, 31 May 2023 05:32:15 GMT

Redirecting to 8g1n

←Older revision		Revision as of 05:32, 31 May 2023
Line 1:		Line 1:
-		+	#REDIRECT [[8g1n]] This PDB entry is obsolete and replaced by 8g1n
-	~~==Structure of Campylobacter concisus PglC I57M/Q175M variant==~~	+
-	~~<StructureSection load='5w7l' size='340' side='right'caption='~~[[~~5w7l]], [[Resolution\|resolution]] 2.74Å' scene=''>~~	+
-	~~== Structural highlights ==~~	+
-	~~<table><tr><td colspan='2'>[[5w7l~~]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Camc1 Camc1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5W7L OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5W7L FirstGlance]. <br>	+
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PEF:DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE'>PEF</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>	+
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">pglC, CCC13826_0450 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=360104 CAMC1])</td></tr>	+
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Undecaprenyl_phosphate_N,N'-diacetylbacillosamine_1-phosphate_transferase Undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.8.36 2.7.8.36] </span></td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5w7l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5w7l OCA], [http://pdbe.org/5w7l PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5w7l RCSB], [http://www.ebi.ac.uk/pdbsum/5w7l PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5w7l ProSAT]</span></td></tr>	+
-	~~</table>~~	+
-	~~<div style="background-color:#fffaf0;">~~	+
-	~~== Publication Abstract from PubMed ==~~	+
-	Polyprenol phosphate phosphoglycosyl transferases (PGTs) catalyze the first membrane-committed step in assembly of essential glycoconjugates. Currently there is no structure-function information to describe how monotopic PGTs coordinate the reaction between membrane-embedded and soluble substrates. We describe the structure and mode of membrane association of PglC, a PGT from Campylobacter concisus. The structure reveals a unique architecture, provides mechanistic insight and identifies ligand-binding determinants for PglC and the monotopic PGT superfamily.	+
-		+
-	Membrane association of monotopic phosphoglycosyl transferase underpins function.,Ray LC, Das D, Entova S, Lukose V, Lynch AJ, Imperiali B, Allen KN Nat Chem Biol. 2018 May 16. pii: 10.1038/s41589-018-0054-z. doi:, 10.1038/s41589-018-0054-z. PMID:29769739<ref>PMID:29769739</ref>	+
-		+
-	~~From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>~~	+
-	~~</div>~~	+
-	~~<div class="pdbe-citations 5w7l" style="background-color:#fffaf0;"></div>~~	+
-	~~== References ==~~	+
-	~~<references/>~~	+
-	~~__TOC__~~	+
-	~~</StructureSection>~~	+
-	~~[[Category: Camc1]]~~	+
-	~~[[Category: Large Structures]]~~	+
-	~~[[Category: Undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase]]~~	+
-	~~[[Category: Allen, K N]]~~	+
-	~~[[Category: Das, D]]~~	+
-	~~[[Category: Imperiali, B]]~~	+
-	~~[[Category: Ray, L C]]~~	+
-	~~[[Category: Membrane protein]]~~	+
-	~~[[Category: Monotopic]]~~	+
-	~~[[Category: Phosphoglycosyltransferase]]~~	+

OCA at 08:09, 27 November 2019

OCA — Wed, 27 Nov 2019 08:09:49 GMT

←Older revision		Revision as of 08:09, 27 November 2019
Line 1:		Line 1:

	==Structure of Campylobacter concisus PglC I57M/Q175M variant==		==Structure of Campylobacter concisus PglC I57M/Q175M variant==
-	<StructureSection load='5w7l' size='340' side='right' caption='[[5w7l]], [[Resolution\|resolution]] 2.74Å' scene=''>	+	<StructureSection load='5w7l' size='340' side='right'caption='[[5w7l]], [[Resolution\|resolution]] 2.74Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[5w7l]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Camc1 Camc1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5W7L OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5W7L FirstGlance]. <br>		<table><tr><td colspan='2'>[[5w7l]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Camc1 Camc1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5W7L OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5W7L FirstGlance]. <br>
Line 23:		Line 23:
	</StructureSection>		</StructureSection>
	[[Category: Camc1]]		[[Category: Camc1]]
		+	[[Category: Large Structures]]
	[[Category: Undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase]]		[[Category: Undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase]]
	[[Category: Allen, K N]]		[[Category: Allen, K N]]

OCA at 12:33, 7 November 2018

OCA — Wed, 07 Nov 2018 12:33:42 GMT

←Older revision		Revision as of 12:33, 7 November 2018
Line 3:		Line 3:
	<StructureSection load='5w7l' size='340' side='right' caption='[[5w7l]], [[Resolution\|resolution]] 2.74Å' scene=''>		<StructureSection load='5w7l' size='340' side='right' caption='[[5w7l]], [[Resolution\|resolution]] 2.74Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5w7l]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5W7L OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5W7L FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5w7l]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Camc1 Camc1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5W7L OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5W7L FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PEF:DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE'>PEF</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PEF:DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE'>PEF</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">pglC, CCC13826_0450 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=360104 CAMC1])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Undecaprenyl_phosphate_N,N'-diacetylbacillosamine_1-phosphate_transferase Undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.8.36 2.7.8.36] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Undecaprenyl_phosphate_N,N'-diacetylbacillosamine_1-phosphate_transferase Undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.8.36 2.7.8.36] </span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5w7l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5w7l OCA], [http://pdbe.org/5w7l PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5w7l RCSB], [http://www.ebi.ac.uk/pdbsum/5w7l PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5w7l ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5w7l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5w7l OCA], [http://pdbe.org/5w7l PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5w7l RCSB], [http://www.ebi.ac.uk/pdbsum/5w7l PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5w7l ProSAT]</span></td></tr>
Line 21:		Line 22:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Camc1]]
	[[Category: Undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase]]		[[Category: Undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase]]
	[[Category: Allen, K N]]		[[Category: Allen, K N]]

OCA at 05:49, 30 May 2018

OCA — Wed, 30 May 2018 05:49:18 GMT

←Older revision		Revision as of 05:49, 30 May 2018
Line 8:		Line 8:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5w7l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5w7l OCA], [http://pdbe.org/5w7l PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5w7l RCSB], [http://www.ebi.ac.uk/pdbsum/5w7l PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5w7l ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5w7l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5w7l OCA], [http://pdbe.org/5w7l PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5w7l RCSB], [http://www.ebi.ac.uk/pdbsum/5w7l PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5w7l ProSAT]</span></td></tr>
	</table>		</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Polyprenol phosphate phosphoglycosyl transferases (PGTs) catalyze the first membrane-committed step in assembly of essential glycoconjugates. Currently there is no structure-function information to describe how monotopic PGTs coordinate the reaction between membrane-embedded and soluble substrates. We describe the structure and mode of membrane association of PglC, a PGT from Campylobacter concisus. The structure reveals a unique architecture, provides mechanistic insight and identifies ligand-binding determinants for PglC and the monotopic PGT superfamily.
		+
		+	Membrane association of monotopic phosphoglycosyl transferase underpins function.,Ray LC, Das D, Entova S, Lukose V, Lynch AJ, Imperiali B, Allen KN Nat Chem Biol. 2018 May 16. pii: 10.1038/s41589-018-0054-z. doi:, 10.1038/s41589-018-0054-z. PMID:29769739<ref>PMID:29769739</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 5w7l" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 07:15, 23 May 2018

OCA — Wed, 23 May 2018 07:15:22 GMT

←Older revision		Revision as of 07:15, 23 May 2018
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry~~ 5w7l is ~~ON HOLD until Paper Publication~~	+	==Structure of Campylobacter concisus PglC I57M/Q175M variant==
-		+	<StructureSection load='5w7l' size='340' side='right' caption='[[5w7l]], [[Resolution\|resolution]] 2.74Å' scene=''>
-	~~Authors~~:	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[5w7l]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5W7L OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5W7L FirstGlance]. <br>
-	~~Description~~:	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PEF:DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE'>PEF</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Undecaprenyl_phosphate_N,N'-diacetylbacillosamine_1-phosphate_transferase Undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.8.36 2.7.8.36] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5w7l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5w7l OCA], [http://pdbe.org/5w7l PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5w7l RCSB], [http://www.ebi.ac.uk/pdbsum/5w7l PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5w7l ProSAT]</span></td></tr>
		+	</table>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase]]
		+	[[Category: Allen, K N]]
		+	[[Category: Das, D]]
		+	[[Category: Imperiali, B]]
		+	[[Category: Ray, L C]]
		+	[[Category: Membrane protein]]
		+	[[Category: Monotopic]]
		+	[[Category: Phosphoglycosyltransferase]]

OCA at 05:31, 25 October 2017

OCA — Wed, 25 Oct 2017 05:31:47 GMT

←Older revision		Revision as of 05:31, 25 October 2017
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 5w7l is ON HOLD	+	The entry 5w7l is ON HOLD until Paper Publication

	Authors:		Authors:

OCA: Protected "5w7l" [edit=sysop:move=sysop]

OCA — Wed, 27 Sep 2017 14:32:55 GMT

Protected "5w7l" [edit=sysop:move=sysop]

←Older revision

Revision as of 14:32, 27 September 2017

OCA: New page: '''Unreleased structure''' The entry 5w7l is ON HOLD Authors: Description: Category: Unreleased Structures

OCA — Wed, 27 Sep 2017 14:32:54 GMT

New page: '''Unreleased structure''' The entry 5w7l is ON HOLD Authors: Description: Category: Unreleased Structures

New page

'''Unreleased structure'''

The entry 5w7l is ON HOLD

Authors:

Description:
[[Category: Unreleased Structures]]