5wyl - Revision history

OCA at 07:51, 22 November 2023

OCA — Wed, 22 Nov 2023 07:51:40 GMT

←Older revision		Revision as of 07:51, 22 November 2023
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	==Crystal structure of Chaetomium thermophilum Utp10 N-terminal domain in complex with Utp17 C-terminal helices==		==Crystal structure of Chaetomium thermophilum Utp10 N-terminal domain in complex with Utp17 C-terminal helices==
-	<StructureSection load='5wyl' size='340' side='right' caption='[[5wyl]], [[Resolution\|resolution]] 2.64Å' scene=''>	+	<StructureSection load='5wyl' size='340' side='right'caption='[[5wyl]], [[Resolution\|resolution]] 2.64Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5wyl]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Chatd Chatd~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5WYL OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5WYL FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5wyl]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Chaetomium_thermophilum_var._thermophilum_DSM_1495 Chaetomium thermophilum var. thermophilum DSM 1495]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5WYL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5WYL FirstGlance]. <br>
-	</td></tr><tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat"~~>CTHT_0024640 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&~~id=~~759272 CHATD])~~, ~~CTHT_0058290 (~~[~~http://www~~.~~ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info~~&~~srchmode=5&id=759272 CHATD])~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.638Å</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5wyl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5wyl OCA], [~~http~~://pdbe.org/5wyl PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5wyl RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5wyl PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5wyl ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5wyl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5wyl OCA], [https://pdbe.org/5wyl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5wyl RCSB], [https://www.ebi.ac.uk/pdbsum/5wyl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5wyl ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/G0S5L1_CHATD G0S5L1_CHATD]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Chatd~~]]	+	[[Category: Chaetomium thermophilum var. thermophilum DSM 1495]]
-	[[Category: ~~Chen, R~~]]	+	[[Category: Large Structures]]
-	[[Category: ~~Ye, K~~]]	+	[[Category: Chen R]]
-	[[Category: ~~Zhu, X~~]]	+	[[Category: Ye K]]
-	[[Category: ~~Components of 90s preribosome]]~~	+	[[Category: Zhu X]]
-	~~[[Category: Nucleolar protein]]~~	+
-	~~[[Category: Protein complex]]~~	+
-	~~[[Category: Ribosomal protein-nuclear protein complex~~]]	+

OCA at 11:27, 6 November 2017

OCA — Mon, 06 Nov 2017 11:27:21 GMT

←Older revision		Revision as of 11:27, 6 November 2017
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-	'''Unreleased structure'''

-	~~The entry~~ 5wyl is ~~ON HOLD until Jan 13 2019~~	+	==Crystal structure of Chaetomium thermophilum Utp10 N-terminal domain in complex with Utp17 C-terminal helices==
		+	<StructureSection load='5wyl' size='340' side='right' caption='[[5wyl]], [[Resolution\|resolution]] 2.64Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[5wyl]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Chatd Chatd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5WYL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5WYL FirstGlance]. <br>
		+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">CTHT_0024640 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=759272 CHATD]), CTHT_0058290 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=759272 CHATD])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5wyl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5wyl OCA], [http://pdbe.org/5wyl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5wyl RCSB], [http://www.ebi.ac.uk/pdbsum/5wyl PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5wyl ProSAT]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Eukaryotic small ribosomal subunits are first assembled into 90S pre-ribosomes. The complete 90S is a gigantic complex with a molecular mass of approximately five megadaltons. Here, we report the nearly complete architecture of Saccharomyces cerevisiae 90S determined from three cryo-electron microscopy single particle reconstructions at 4.5 to 8.7 angstrom resolution. The majority of the density maps were modeled and assigned to specific RNA and protein components. The nascent ribosome is assembled into isolated native-like substructures that are stabilized by abundant assembly factors. The 5' external transcribed spacer and U3 snoRNA nucleate a large subcomplex that scaffolds the nascent ribosome. U3 binds four sites of pre-rRNA, including a novel site on helix 27 but not the 3' side of the central pseudoknot, and crucially organizes the 90S structure. The 90S model provides significant insight into the principle of small subunit assembly and the function of assembly factors.

-	~~Authors: Chen, R~~., Zhu, X., Ye, K.	+	Molecular architecture of the 90S small subunit pre-ribosome.,Sun Q, Zhu X, Qi J, An W, Lan P, Tan D, Chen R, Wang B, Zheng S, Zhang C, Chen X, Zhang W, Chen J, Dong MQ, Ye K Elife. 2017 Feb 28;6. pii: e22086. doi: 10.7554/eLife.22086. PMID:28244370<ref>PMID:28244370</ref>

-	~~Description: Crystal structure~~ of ~~Chaetomium thermophilum Utp10 N~~-~~terminal domain in complex with Utp17 C~~-~~terminal helices~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	[[Category: ~~Unreleased Structures~~]]	+	</div>
		+	<div class="pdbe-citations 5wyl" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Chatd]]
		+	[[Category: Chen, R]]
	[[Category: Ye, K]]		[[Category: Ye, K]]
	[[Category: Zhu, X]]		[[Category: Zhu, X]]
-	[[Category: ~~Chen, R~~]]	+	[[Category: Components of 90s preribosome]]
		+	[[Category: Nucleolar protein]]
		+	[[Category: Protein complex]]
		+	[[Category: Ribosomal protein-nuclear protein complex]]

OCA at 19:59, 15 March 2017

OCA — Wed, 15 Mar 2017 19:59:34 GMT

←Older revision		Revision as of 19:59, 15 March 2017
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	Description: Crystal structure of Chaetomium thermophilum Utp10 N-terminal domain in complex with Utp17 C-terminal helices		Description: Crystal structure of Chaetomium thermophilum Utp10 N-terminal domain in complex with Utp17 C-terminal helices
	[[Category: Unreleased Structures]]		[[Category: Unreleased Structures]]
-	[[Category: Chen, R]]
	[[Category: Ye, K]]		[[Category: Ye, K]]
	[[Category: Zhu, X]]		[[Category: Zhu, X]]
		+	[[Category: Chen, R]]

OCA at 22:35, 25 January 2017

OCA — Wed, 25 Jan 2017 22:35:28 GMT

←Older revision		Revision as of 22:35, 25 January 2017
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 5wyl is ON HOLD	+	The entry 5wyl is ON HOLD until Jan 13 2019

	Authors: Chen, R., Zhu, X., Ye, K.		Authors: Chen, R., Zhu, X., Ye, K.

OCA: Protected "5wyl" [edit=sysop:move=sysop]

OCA — Wed, 18 Jan 2017 15:21:53 GMT

Protected "5wyl" [edit=sysop:move=sysop]

←Older revision

Revision as of 15:21, 18 January 2017

OCA: New page: '''Unreleased structure''' The entry 5wyl is ON HOLD Authors: Chen, R., Zhu, X., Ye, K. Description: Crystal structure of Chaetomium thermophilum Utp10 N-terminal domain in complex wit...

OCA — Wed, 18 Jan 2017 15:21:51 GMT

New page: '''Unreleased structure''' The entry 5wyl is ON HOLD Authors: Chen, R., Zhu, X., Ye, K. Description: Crystal structure of Chaetomium thermophilum Utp10 N-terminal domain in complex wit...

New page

'''Unreleased structure'''

The entry 5wyl is ON HOLD

Authors: Chen, R., Zhu, X., Ye, K.

Description: Crystal structure of Chaetomium thermophilum Utp10 N-terminal domain in complex with Utp17 C-terminal helices
[[Category: Unreleased Structures]]
[[Category: Chen, R]]
[[Category: Ye, K]]
[[Category: Zhu, X]]