5xwz - Revision history

OCA at 08:16, 22 November 2023

OCA — Wed, 22 Nov 2023 08:16:49 GMT

←Older revision		Revision as of 08:16, 22 November 2023
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	<StructureSection load='5xwz' size='340' side='right'caption='[[5xwz]], [[Resolution\|resolution]] 1.75Å' scene=''>		<StructureSection load='5xwz' size='340' side='right'caption='[[5xwz]], [[Resolution\|resolution]] 1.75Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5xwz]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5XWZ OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=5XWZ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5xwz]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Cladophialophora_bantiana_CBS_173.52 Cladophialophora bantiana CBS 173.52]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5XWZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5XWZ FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MLI:MALONATE+ION'>MLI</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.75Å</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=5xwz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5xwz OCA], [~~http~~://pdbe.org/5xwz PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5xwz RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5xwz PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5xwz ProSAT]</span></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MLI:MALONATE+ION'>MLI</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5xwz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5xwz OCA], [https://pdbe.org/5xwz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5xwz RCSB], [https://www.ebi.ac.uk/pdbsum/5xwz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5xwz ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/A0A0D2H023_XYLBA A0A0D2H023_XYLBA]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Cladophialophora bantiana CBS 173 52]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Chen~~, C C~~]]	+	[[Category: Chen CC]]
-	[[Category: Guo~~, R T~~]]	+	[[Category: Guo RT]]
-	[[Category: Liu~~, W D~~]]	+	[[Category: Liu WD]]
-	[[Category: Liu~~, W T~~]]	+	[[Category: Liu WT]]
-	[[Category: Zheng~~, Y Y]]~~	+	[[Category: Zheng YY]]
-	~~[[Category: Alpha/beta-hydrolase]]~~	+
-	~~[[Category: Hydrolase]]~~	+
-	~~[[Category: Lactonase]]~~	+
-	~~[[Category: Zearalenone~~]]	+

OCA at 07:00, 14 October 2020

OCA — Wed, 14 Oct 2020 07:00:47 GMT

←Older revision		Revision as of 07:00, 14 October 2020
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	==Crystal structure of a lactonase from Cladophialophora bantiana==		==Crystal structure of a lactonase from Cladophialophora bantiana==
-	<StructureSection load='5xwz' size='340' side='right' caption='[[5xwz]], [[Resolution\|resolution]] 1.75Å' scene=''>	+	<StructureSection load='5xwz' size='340' side='right'caption='[[5xwz]], [[Resolution\|resolution]] 1.75Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5xwz]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5XWZ OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5XWZ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5xwz]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5XWZ OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5XWZ FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MLI:MALONATE+ION'>MLI</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MLI:MALONATE+ION'>MLI</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5xwz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5xwz OCA], [http://pdbe.org/5xwz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5xwz RCSB], [http://www.ebi.ac.uk/pdbsum/5xwz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5xwz ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5xwz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5xwz OCA], [http://pdbe.org/5xwz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5xwz RCSB], [http://www.ebi.ac.uk/pdbsum/5xwz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5xwz ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Chen, C C]]		[[Category: Chen, C C]]
	[[Category: Guo, R T]]		[[Category: Guo, R T]]

OCA at 08:04, 2 May 2018

OCA — Wed, 02 May 2018 08:04:06 GMT

←Older revision		Revision as of 08:04, 2 May 2018
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-	'''Unreleased structure'''

-	~~The entry~~ 5xwz is ~~ON HOLD until Jun 30 2019~~	+	==Crystal structure of a lactonase from Cladophialophora bantiana==
		+	<StructureSection load='5xwz' size='340' side='right' caption='[[5xwz]], [[Resolution\|resolution]] 1.75Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[5xwz]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5XWZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5XWZ FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MLI:MALONATE+ION'>MLI</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5xwz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5xwz OCA], [http://pdbe.org/5xwz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5xwz RCSB], [http://www.ebi.ac.uk/pdbsum/5xwz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5xwz ProSAT]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Zearalenone (ZEN) is a mycotoxin which causes huge economic losses in the food and animal feed industries. The lactonase ZHD101 from Clonostachys rosea, which catalyzes the hydrolytic degradation of ZEN, is the only known ZEN-detoxifying enzyme. Here, a protein homologous to ZHD101, denoted CbZHD, from Cladophialophora batiana was expressed and characterized. Sequence alignment indicates that CbZHD possesses the same catalytic triad and ZEN-interacting residues as found in ZHD101. CbZHD exhibits optimal enzyme activity at 35 degrees C and pH 8, and is sensitive to heat treatment. The crystal structure of apo CbZHD was determined to 1.75 A resolution. The active-site compositions of CbZHD and ZHD101 were analyzed.

-	~~Authors: Zheng, Y.Y~~., ~~Liu~~, ~~W.T.~~, Liu, W~~.D.~~, Chen, C.C., ~~Guo, R~~.T.	+	Characterization and crystal structure of a novel zearalenone hydrolase from Cladophialophora bantiana.,Hui R, Hu X, Liu W, Liu W, Zheng Y, Chen Y, Guo RT, Jin J, Chen CC Acta Crystallogr F Struct Biol Commun. 2017 Sep 1;73(Pt 9):515-519. doi:, 10.1107/S2053230X17011840. Epub 2017 Aug 21. PMID:28876230<ref>PMID:28876230</ref>

-	~~Description: Crystal structure of~~ a ~~lactonase from Cladophialophora bantiana~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	~~[[Category~~: ~~Unreleased Structures]]~~	+	</div>
-	[[Category: ~~Liu~~, ~~W.T~~]]	+	<div class="pdbe-citations 5xwz" style="background-color:#fffaf0;"></div>
-	[[Category: ~~Chen~~, ~~C.C~~]]	+	== References ==
-	[[Category: Liu, W.D]]	+	<references/>
-	[[Category: ~~Guo~~, R.T]]	+	__TOC__
-	[[Category: Zheng, Y.Y]]	+	</StructureSection>
		+	[[Category: Chen, C C]]
		+	[[Category: Guo, R T]]
		+	[[Category: Liu, W D]]
		+	[[Category: Liu, W T]]
		+	[[Category: Zheng, Y Y]]
		+	[[Category: Alpha/beta-hydrolase]]
		+	[[Category: Hydrolase]]
		+	[[Category: Lactonase]]
		+	[[Category: Zearalenone]]

OCA: Protected "5xwz" [edit=sysop:move=sysop]

OCA — Wed, 27 Sep 2017 15:52:22 GMT

Protected "5xwz" [edit=sysop:move=sysop]

←Older revision

Revision as of 15:52, 27 September 2017

OCA: New page: '''Unreleased structure''' The entry 5xwz is ON HOLD until Jun 30 2019 Authors: Zheng, Y.Y., Liu, W.T., Liu, W.D., Chen, C.C., Guo, R.T. Description: Crystal structure of a lactonase f...

OCA — Wed, 27 Sep 2017 15:52:21 GMT

New page: '''Unreleased structure''' The entry 5xwz is ON HOLD until Jun 30 2019 Authors: Zheng, Y.Y., Liu, W.T., Liu, W.D., Chen, C.C., Guo, R.T. Description: Crystal structure of a lactonase f...

New page

'''Unreleased structure'''

The entry 5xwz is ON HOLD until Jun 30 2019

Authors: Zheng, Y.Y., Liu, W.T., Liu, W.D., Chen, C.C., Guo, R.T.

Description: Crystal structure of a lactonase from Cladophialophora bantiana
[[Category: Unreleased Structures]]
[[Category: Liu, W.T]]
[[Category: Chen, C.C]]
[[Category: Liu, W.D]]
[[Category: Guo, R.T]]
[[Category: Zheng, Y.Y]]